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(-) Description

Title :  HUMAN GLUTATHIONE S-TRANSFERASE P1-1, COMPLEX WITH GLUTATHIONE
 
Authors :  A. Oakley, M. Parker
Date :  14 Aug 97  (Deposition) - 16 Sep 98  (Release) - 14 Dec 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A,B,C
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C  (2x)
Keywords :  Transferase, Glutathione (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. J. Oakley, M. L. Bello, A. Battistoni, G. Ricci, J. Rossjohn, H. O. Villar, M. W. Parker
The Structures Of Human Glutathione Transferase P1-1 In Complex With Glutathione And Various Inhibitors At High Resolution.
J. Mol. Biol. V. 274 84 1997
PubMed-ID: 9398518  |  Reference-DOI: 10.1006/JMBI.1997.1364
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - GLUTATHIONE S-TRANSFERASE P1-1
    Cellular Location: CYTOPLASM
    Chains: A, B, C
    EC Number: 2.5.1.18
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: THREE INTACT MONOMERS
    Gene: GTP_HUMAN
    Organ: PLACENTA
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: GSTP1-1

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit : ABC
Biological Unit 1 (1x): AB 
Biological Unit 2 (2x):   C

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 7)

Asymmetric Unit (3, 7)
No.NameCountTypeFull Name
1GSH3Ligand/IonGLUTATHIONE
2MES2Ligand/Ion2-(N-MORPHOLINO)-ETHANESULFONIC ACID
3SO42Ligand/IonSULFATE ION
Biological Unit 1 (3, 4)
No.NameCountTypeFull Name
1GSH2Ligand/IonGLUTATHIONE
2MES1Ligand/Ion2-(N-MORPHOLINO)-ETHANESULFONIC ACID
3SO41Ligand/IonSULFATE ION
Biological Unit 2 (3, 6)
No.NameCountTypeFull Name
1GSH2Ligand/IonGLUTATHIONE
2MES2Ligand/Ion2-(N-MORPHOLINO)-ETHANESULFONIC ACID
3SO42Ligand/IonSULFATE ION

(-) Sites  (7, 7)

Asymmetric Unit (7, 7)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASN C:66 , ARG C:70 , ASP C:94 , GLU C:97 , HOH C:213 , HOH C:384BINDING SITE FOR RESIDUE SO4 C 210
2AC2SOFTWAREASN A:66 , ARG A:70 , ASP A:94 , GLU A:97 , HOH A:248 , HOH A:293 , HOH A:371 , ARG B:70 , ASP B:94 , GLU B:97 , HOH B:213BINDING SITE FOR RESIDUE SO4 A 210
3AC3SOFTWAREPHE A:8 , ARG A:13 , TRP A:38 , LYS A:44 , GLN A:51 , LEU A:52 , PRO A:53 , GLN A:64 , SER A:65 , HOH A:232 , HOH A:243 , HOH A:299 , HOH A:355 , ASP B:98BINDING SITE FOR RESIDUE GSH A 211
4AC4SOFTWAREASP A:98 , PHE B:8 , ARG B:13 , TRP B:38 , LYS B:44 , GLN B:51 , LEU B:52 , PRO B:53 , GLN B:64 , SER B:65 , HOH B:256 , HOH B:257 , HOH B:283 , HOH B:288 , HOH B:304 , HOH B:341BINDING SITE FOR RESIDUE GSH B 210
5AC5SOFTWARETRP B:28 , GLU B:30 , PHE B:192 , GLU B:197 , HOH B:367BINDING SITE FOR RESIDUE MES B 211
6AC6SOFTWAREPHE C:8 , ARG C:13 , TRP C:38 , LYS C:44 , GLY C:50 , GLN C:51 , LEU C:52 , PRO C:53 , GLN C:64 , SER C:65 , ASP C:98 , HOH C:224 , HOH C:241 , HOH C:276 , HOH C:360 , HOH C:416BINDING SITE FOR RESIDUE GSH C 211
7AC7SOFTWAREARG C:74 , TYR C:79 , GLY C:80 , LYS C:81 , ASP C:82 , GLN C:83 , ALA C:86 , HOH C:412BINDING SITE FOR RESIDUE MES C 212

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 8GSS)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric Unit
No.Residues
1Pro A:1 -Pro A:2
2Leu A:52 -Pro A:53
3Pro B:1 -Pro B:2
4Leu B:52 -Pro B:53
5Pro C:1 -Pro C:2
6Leu C:52 -Pro C:53

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 8GSS)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 8GSS)

(-) Exons   (0, 0)

(no "Exon" information available for 8GSS)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:209
                                                                                                                                                                                                                                                 
               SCOP domains d8gssa2 A:1-76 Class pi GST                                                 d8gssa1 A:77-209 Class pi GST                                                                                                         SCOP domains
               CATH domains -8gssA01 A:2-78,A:187-208 Glutaredoxin                                        8gssA02 A:79-186  [code=1.20.1050.10, no name defined]                                                      8gssA01 Glutaredoxin  - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...hhhhhhhhhhhh.....eeeee.hhhhhh.hhhhh.......eeee..eeee.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhh........hhhhhhhhhhhh.hhhhhhhh.hhhh.......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 8gss A   1 PPYTVVYFPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLYGQLPKFQDGDLTLYQSNTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYTNYEAGKDDYVKALPGQLKPFETLLSQNQGGKTFIVGDQISFADYNLLDLLLIHEVLAPGCLDAFPLLSAYVGRLSARPKLKAFLASPEYVNLPINGNGKQ 209
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200         


Chain B from PDB  Type:PROTEIN  Length:209
                                                                                                                                                                                                                                                 
               SCOP domains d8gssb2 B:1-76 Class pi GST                                                 d8gssb1 B:77-209 Class pi GST                                                                                                         SCOP domains
               CATH domains -8gssB01 B:2-78,B:187-208 Glutaredoxin                                        8gssB02 B:79-186  [code=1.20.1050.10, no name defined]                                                      8gssB01 Glutaredoxin  - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...hhhhhhhhhhhh....eeeeee.hhhhhh.hhhhh.......eeee..eeee.hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.hhh..........hhhhhhhhhhhhhhhh........hhhhhhhhhhhh.hhhhhhhh.hhhh.......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 8gss B   1 PPYTVVYFPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLYGQLPKFQDGDLTLYQSNTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYTNYEAGKDDYVKALPGQLKPFETLLSQNQGGKTFIVGDQISFADYNLLDLLLIHEVLAPGCLDAFPLLSAYVGRLSARPKLKAFLASPEYVNLPINGNGKQ 209
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200         


Chain C from PDB  Type:PROTEIN  Length:209
                                                                                                                                                                                                                                                 
               SCOP domains d8gssc2 C:1-76 Class pi GST                                                 d8gssc1 C:77-209 Class pi GST                                                                                                         SCOP domains
               CATH domains -8gssC01 C:2-78,C:187-208 Glutaredoxin                                        8gssC02 C:79-186  [code=1.20.1050.10, no name defined]                                                      8gssC01 Glutaredoxin  - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...hhhhhhhhhhhh....eeeeee.hhhhhh.hhhhh.......eeee..eeee.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhh........hhhhhhhhhhhh.hhhhhhhh.hhhh.......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 8gss C   1 PPYTVVYFPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLYGQLPKFQDGDLTLYQSNTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYTNYEAGKDDYVKALPGQLKPFETLLSQNQGGKTFIVGDQISFADYNLLDLLLIHEVLAPGCLDAFPLLSAYVGRLSARPKLKAFLASPEYVNLPINGNGKQ 209
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 6)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 6)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: 3-Layer(aba) Sandwich (12045)
(-)
Topology: Glutaredoxin (620)
(-)
Homologous Superfamily: Glutaredoxin (617)
(-)
Human (Homo sapiens) (186)
1a8gssA01A:2-78,A:187-208
1b8gssB01B:2-78,B:187-208
1c8gssC01C:2-78,C:187-208
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 8GSS)

(-) Gene Ontology  (63, 63)

Asymmetric Unit(hide GO term definitions)

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  8gss
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GSTP1_HUMAN | P09211: 10gs 11gs 12gs 13gs 14gs 16gs 17gs 18gs 19gs 1aqv 1aqw 1aqx 1eog 1eoh 1gss 1kbn 1lbk 1md3 1md4 1pgt 1px6 1px7 1zgn 20gs 22gs 2a2r 2a2s 2gss 2j9h 2pgt 3csh 3csi 3csj 3dd3 3dgq 3gss 3gus 3hjm 3hjo 3hkr 3ie3 3km6 3kmn 3kmo 3n9j 3pgt 4gss 4pgt 5dak 5dal 5dcg 5ddl 5djl 5djm 5gss 5j41 5jcw 5l6x 6gss 7gss 9gss

(-) Related Entries Specified in the PDB File

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