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(-) Description

Title :  ANAPLASTIC LYMPHOMA KINASE (ALK) CATALYTIC DOMAIN COMPLEXED WITH NOVEL INHIBITOR 3-SULFONYLPYRAZOL-4-AMINO PYRIMIDINE
 
Authors :  C. Wang, P. Zhang, J. Dong
Date :  07 Mar 16  (Deposition) - 04 May 16  (Release) - 04 May 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.12
Chains :  Asym./Biol. Unit :  A
Keywords :  Kinase, Inhibitor, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Zhang, J. Dong, B. Zhong, D. Zhang, H. Yuan, C. Jin, X. Xu, H. Li, Y. Zhou, Z. Liang, M. Ji, T. Xu, G. Song, L. Zhang, G. Chen, X. Meng, D. Sun J. Shih, R. Zhang, G. Hou, C. Wang, Y. Jin, Q. Yang
Design And Synthesis Of Novel 3-Sulfonylpyrazol-4-Amino Pyrimidines As Potent Anaplastic Lymphoma Kinase (Alk) Inhibitors.
Bioorg. Med. Chem. Lett. V. 26 1910 2016
PubMed-ID: 26979157  |  Reference-DOI: 10.1016/J.BMCL.2016.03.017

(-) Compounds

Molecule 1 - ALK TYROSINE KINASE RECEPTOR
    Chains: A
    EC Number: 2.7.10.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Fragment: UNP RESIDUES 1093-1411
    Gene: ALK
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: ANAPLASTIC LYMPHOMA KINASE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1CZ41Ligand/Ion5-CHLORO-N~2~-{5-METHYL-4-(1-METHYLPIPERIDIN-4-YL)-2-[(PROPAN-2-YL)OXY]PHENYL}-N~4~-{1-METHYL-3-[(PROPAN-2-YL)SULFONYL]-1H-PYRAZOL-4-YL}PYRIMIDINE-2,4-DIAMINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:1122 , GLY A:1123 , GLY A:1125 , ALA A:1126 , ALA A:1148 , LYS A:1150 , LEU A:1196 , GLU A:1197 , MET A:1199 , ASP A:1203 , LEU A:1256 , ASP A:1270binding site for residue CZ4 A 1501

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5IMX)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Leu A:1190 -Pro A:1191

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5IMX)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5IMX)

(-) Exons   (0, 0)

(no "Exon" information available for 5IMX)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:266
                                                                                                                                                                                                                                                                                                           
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeeeee....eeeeee.....eeeeee.hhhhhhhhhhhh.......eeeee.....eeeeee.....hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee........eee.............hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhh..........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5imx A 1109 KEVPRKNITLIRGLGHGAFGEVYEGQVSPLQVAVKTLLDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDICAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIE 1400
                                  1118      1128      1145      1164      1174      1184      1194      1204      1214      1224      1234      1244      1254      1264      1274  ||  1294      1304      1314      1324      1334      1344      1354      1364      1374      1384      1394      
                                                    1136|    1152|                                                                                                               1277|                                                                                                                
                                                     1144     1162                                                                                                                1288
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5IMX)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5IMX)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5IMX)

(-) Gene Ontology  (30, 30)

Asymmetric/Biological Unit(hide GO term definitions)

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  2.7.10.1
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ALK_HUMAN | Q9UM73: 2kup 2kuq 2xb7 2xba 2xp2 2yfx 2yhv 2yjr 2yjs 2ys5 2yt2 3aox 3l9p 3lcs 3lct 4anl 4anq 4ans 4ccb 4ccu 4cd0 4cli 4clj 4cmo 4cmt 4cmu 4cnh 4ctb 4ctc 4dce 4fnw 4fnx 4fny 4fnz 4fob 4foc 4fod 4joa 4mkc 4tt7 4z55 5a9u 5aa8 5aa9 5aaa 5aab 5aac 5fto 5ftq 5iug 5iuh 5iui 5j7h 5kz0

(-) Related Entries Specified in the PDB File

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