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(-) Description

Authors :  J. Y. Su, Y. L. Si
Date :  28 Sep 16  (Deposition) - 21 Dec 16  (Release) - 21 Dec 16  (Revision)
Resolution :  1.08
Chains :  Asym./Biol. Unit :  A
Keywords :  Galectin-8 N-Crd Structure, Sugar Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
Reference :  Y. L. Si, Y. Wang, J. Gao, C. Song, S. Feng, Y. Zhou, G. Tai, J. Y. Su
Crystallization Of Galectin-8 Linker Reveals Intricate Relationship Between The N-Terminal Tail And The Linker
Int J Mol Sci V. 17 2088 2016
PubMed: search  |  Reference-DOI: 10.3390/IJMS17122088

(-) Compounds

Molecule 1 - GALECTIN-8
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606

 Structural Features

(-) Chains, Units

Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
1AC1SOFTWAREARG A:52 , HIS A:72 , ASN A:74 , ARG A:76 , ASN A:86 , TRP A:93 , GLU A:96 , HOH A:378 , HOH A:405binding site for residue GOL A 201
2AC2SOFTWAREGLN A:54 , ARG A:66 , HOH A:457 , HOH A:502binding site for residue NA A 202

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5GZC)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
1Ile A:24 -Pro A:25
2Lys A:64 -Pro A:65

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5GZC)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5GZC)

(-) Exons   (0, 0)

(no "Exon" information available for 5GZC)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:152
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163  

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5GZC)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5GZC)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5GZC)

(-) Gene Ontology  (8, 8)

Asymmetric/Biological Unit(hide GO term definitions)


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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

        LEG8_HUMAN | O002142yro 2yv8 2yxs 3ap4 3ap5 3ap6 3ap7 3ap9 3apb 3ojb 3vkl 3vkm 3vkn 3vko 4bmb 4bme 4fqz 4gxl 4han 5gzd 5gze 5gzf 5gzg 5t7i 5t7s 5t7t 5t7u

(-) Related Entries Specified in the PDB File

5gzd 5gze 5gzf 5gzg