3VKL - JenaLib

Asymmetric Unit (Jmol Viewer)

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Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   PROTEASE-RESISTANT MUTANT FORM OF HUMAN GALECTIN-8 IN COMPLEX WITH TWO LACTOSE MOLECULES

Authors :   S. Kamitori, H. Yoshida

Date :   18 Nov 11 (Deposition) - 12 Sep 12 (Release) - 03 Jul 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.55

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Beta-Sandwich, Carbohydrate Binding, Oligosaccharide, Sugar Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   H. Yoshida, S. Yamashita, M. Teraoka, A. Itoh, S. Nakakita, N. Nishi, S. Kamitori
X-Ray Structure Of A Protease-Resistant Mutant Form Of Huma Galectin-8 With Two Carbohydrate Recognition Domains
Febs J. V. 279 3937 2012
PubMed-ID: 22913484 | Reference-DOI: 10.1111/J.1742-4658.2012.08753.X

Molecule 1 - GALECTIN-8
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Fragment	:	N-TERMINAL CARBOHYDRATE RECOGNITION DOMAIN, C-TERMINAL CARBOHYDRATE RECOGNITION DOMAIN
	Gene	:	LGALS8
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	GAL-8, PO66 CARBOHYDRATE-BINDING PROTEIN, PO66-CBP, PROSTATE CARCINOMA TUMOR ANTIGEN 1, PCTA-1

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 28)

No.	Name	Count	Type	Full Name
1	BGC	4	Ligand/Ion	BETA-D-GLUCOSE
2	EDO	20	Ligand/Ion	1,2-ETHANEDIOL
3	GAL	4	Ligand/Ion	BETA-D-GALACTOSE

Biological Unit 1 (3, 16)

No.	Name	Count	Type	Full Name
1	BGC	2	Ligand/Ion	BETA-D-GLUCOSE
2	EDO	12	Ligand/Ion	1,2-ETHANEDIOL
3	GAL	2	Ligand/Ion	BETA-D-GALACTOSE

Biological Unit 2 (3, 12)

No.	Name	Count	Type	Full Name
1	BGC	2	Ligand/Ion	BETA-D-GLUCOSE
2	EDO	8	Ligand/Ion	1,2-ETHANEDIOL
3	GAL	2	Ligand/Ion	BETA-D-GALACTOSE

Asymmetric Unit (27, 27)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ARG A:45 , HIS A:65 , ASN A:67 , ARG A:69 , ASN A:79 , TRP A:86 , GLU A:89 , BGC A:402 , HOH A:509	BINDING SITE FOR RESIDUE GAL A 401
02	AC2	SOFTWARE	ARG A:69 , GLU A:89 , GAL A:401	BINDING SITE FOR RESIDUE BGC A 402
03	AC3	SOFTWARE	HIS A:229 , ASN A:231 , ARG A:233 , ASN A:242 , TRP A:249 , GLU A:252 , BGC A:404	BINDING SITE FOR RESIDUE GAL A 403
04	AC4	SOFTWARE	ARG A:233 , GLU A:252 , ARG A:254 , GAL A:403 , SER B:248	BINDING SITE FOR RESIDUE BGC A 404
05	AC5	SOFTWARE	ARG A:45 , PHE A:46 , GLN A:47 , ASN A:67 , GLY A:142	BINDING SITE FOR RESIDUE EDO A 405
06	AC6	SOFTWARE	GLN A:115 , ALA A:117 , HIS A:122 , MET B:265 , ASN B:283	BINDING SITE FOR RESIDUE EDO A 406
07	AC7	SOFTWARE	GLU A:90 , LEU A:125 , GLY A:127	BINDING SITE FOR RESIDUE EDO A 407
08	AC8	SOFTWARE	ASN A:14 , LYS A:237 , HOH A:572	BINDING SITE FOR RESIDUE EDO A 408
09	AC9	SOFTWARE	LEU A:8 , ILE A:11 , ARG A:36 , GLU A:104	BINDING SITE FOR RESIDUE EDO A 409
10	BC1	SOFTWARE	GLU A:253 , ARG A:254 , ASN A:255	BINDING SITE FOR RESIDUE EDO A 410
11	BC2	SOFTWARE	ASP A:44 , LYS A:71	BINDING SITE FOR RESIDUE EDO A 411
12	BC3	SOFTWARE	LYS A:71 , ARG A:72 , ALA A:73 , HOH A:529	BINDING SITE FOR RESIDUE EDO A 412
13	BC4	SOFTWARE	ASN A:119	BINDING SITE FOR RESIDUE EDO A 413
14	BC5	SOFTWARE	VAL A:20 , GLN A:51 , SER A:54 , SER A:55 , ARG A:59 , ALA A:60 , TYR A:141 , HOH A:561	BINDING SITE FOR RESIDUE EDO A 414
15	BC6	SOFTWARE	GLY A:30 , LEU A:32 , EDO A:416	BINDING SITE FOR RESIDUE EDO A 415
16	BC7	SOFTWARE	ASN A:7 , ARG A:315 , EDO A:415 , HOH A:547	BINDING SITE FOR RESIDUE EDO A 416
17	BC8	SOFTWARE	ARG B:45 , HIS B:65 , ASN B:67 , ARG B:69 , VAL B:77 , ASN B:79 , TRP B:86 , GLU B:89 , BGC B:402 , HOH B:551 , HOH B:554	BINDING SITE FOR RESIDUE GAL B 401
18	BC9	SOFTWARE	ARG B:69 , GLU B:89 , GAL B:401 , EDO B:410 , HOH B:551	BINDING SITE FOR RESIDUE BGC B 402
19	CC1	SOFTWARE	HIS B:229 , ASN B:231 , ARG B:233 , ASN B:242 , TRP B:249 , GLU B:252 , BGC B:404	BINDING SITE FOR RESIDUE GAL B 403
20	CC2	SOFTWARE	GLU A:251 , ARG B:233 , GLU B:252 , ARG B:254 , GAL B:403 , HOH B:589	BINDING SITE FOR RESIDUE BGC B 404
21	CC3	SOFTWARE	GLU B:90 , LEU B:125 , TYR B:126 , GLY B:127 , EDO B:409 , HOH B:502 , HOH B:541	BINDING SITE FOR RESIDUE EDO B 405
22	CC4	SOFTWARE	SER B:102 , ASN B:119	BINDING SITE FOR RESIDUE EDO B 406
23	CC5	SOFTWARE	ILE A:91 , TYR A:93 , ILE B:12 , PHE B:19 , THR B:22	BINDING SITE FOR RESIDUE EDO B 407
24	CC6	SOFTWARE	HIS B:147 , LEU B:234 , LYS B:237 , PRO B:263	BINDING SITE FOR RESIDUE EDO B 408
25	CC7	SOFTWARE	HOH A:564 , THR B:92 , THR B:123 , LEU B:124 , LEU B:125 , EDO B:405	BINDING SITE FOR RESIDUE EDO B 409
26	CC8	SOFTWARE	GLN A:9 , ASN A:10 , ARG A:184 , GLY B:87 , GLU B:89 , BGC B:402	BINDING SITE FOR RESIDUE EDO B 410
27	CC9	SOFTWARE	ARG B:315 , HOH B:575	BINDING SITE FOR RESIDUE EDO B 412

(no "SS Bond" information available for 3VKL)

Asymmetric Unit

No.	Residues
1	Ile A:17	-	Pro A:18
2	Lys A:57	-	Pro A:58
3	Leu A:185	-	Pro A:186
4	Ile B:17	-	Pro B:18
5	Lys B:57	-	Pro B:58
6	Leu B:185	-	Pro B:186

Asymmetric Unit (4, 8)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_012990	F	19	Y	LEG8_HUMAN	Polymorphism	2737713	A/B	F	19	Y
2	UniProt	VAR_009710	R	36	C	LEG8_HUMAN	Polymorphism	1041935	A/B	R	36	C
3	UniProt	VAR_012991	M	56	V	LEG8_HUMAN	Polymorphism	1041937	A/B	M	56	V
4	UniProt	VAR_063506	R	184	S	LEG8_HUMAN	Polymorphism	2243525	A/B	R	184	S

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (4, 4)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_012990	F	19	Y	LEG8_HUMAN	Polymorphism	2737713	A	F	19	Y
2	UniProt	VAR_009710	R	36	C	LEG8_HUMAN	Polymorphism	1041935	A	R	36	C
3	UniProt	VAR_012991	M	56	V	LEG8_HUMAN	Polymorphism	1041937	A	M	56	V
4	UniProt	VAR_063506	R	184	S	LEG8_HUMAN	Polymorphism	2243525	A	R	184	S

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (4, 4)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_012990	F	19	Y	LEG8_HUMAN	Polymorphism	2737713	B	F	19	Y
2	UniProt	VAR_009710	R	36	C	LEG8_HUMAN	Polymorphism	1041935	B	R	36	C
3	UniProt	VAR_012991	M	56	V	LEG8_HUMAN	Polymorphism	1041937	B	M	56	V
4	UniProt	VAR_063506	R	184	S	LEG8_HUMAN	Polymorphism	2243525	B	R	184	S

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GALECTIN	PS51304	Galactoside-binding lectin (galectin) domain profile.	LEG8_HUMAN	19-152 187-317	4	A:19-152 B:19-152 A:187-317 B:187-317

Biological Unit 1 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GALECTIN	PS51304	Galactoside-binding lectin (galectin) domain profile.	LEG8_HUMAN	19-152 187-317	2	A:19-152 - A:187-317 -

Biological Unit 2 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GALECTIN	PS51304	Galactoside-binding lectin (galectin) domain profile.	LEG8_HUMAN	19-152 187-317	2	- B:19-152 - B:187-317

Asymmetric Unit (8, 16)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.3c	ENST00000366584	3c	ENSE00001381502	chr1:236686899-236687361	463	LEG8_HUMAN	-	0	0	-	-
1.6a	ENST00000366584	6a	ENSE00002193374	chr1:236689268-236689415	148	LEG8_HUMAN	1-15	15	2	A:3-15 B:3-15	13 13
1.7b	ENST00000366584	7b	ENSE00002141991	chr1:236700797-236700885	89	LEG8_HUMAN	16-45	30	2	A:16-45 B:16-45	30 30
1.8b	ENST00000366584	8b	ENSE00000793501	chr1:236702179-236702389	211	LEG8_HUMAN	45-115	71	2	A:45-115 B:45-115	71 71
1.9b	ENST00000366584	9b	ENSE00000805377	chr1:236703864-236703983	120	LEG8_HUMAN	116-155	40	2	A:116-155 B:116-155	40 40
1.10e	ENST00000366584	10e	ENSE00000793503	chr1:236704954-236705010	57	LEG8_HUMAN	156-174	19	2	A:156-157 B:156-157	2 2
1.11c	ENST00000366584	11c	ENSE00001226656	chr1:236706061-236706087	27	LEG8_HUMAN	175-183	9	0	-	-
1.11r	ENST00000366584	11r	ENSE00002191373	chr1:236706860-236706948	89	LEG8_HUMAN	184-213	30	2	A:184-213 B:184-213	30 30
1.12c	ENST00000366584	12c	ENSE00000805385	chr1:236708050-236708215	166	LEG8_HUMAN	213-268	56	2	A:213-268 B:213-268	56 56
1.14j	ENST00000366584	14j	ENSE00001911385	chr1:236711312-236714310	2999	LEG8_HUMAN	269-317	49	2	A:269-317 B:269-317	49 49

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:289
 aligned with LEG8_HUMAN | O00214 from UniProtKB/Swiss-Prot  Length:317

    Alignment length:315
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312     
           LEG8_HUMAN     3 LSLNNLQNIIYNPVIPFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSFSSDLQSTQASSLELTEISRENVPKSGTPQLRLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIKAFVRNSFLQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHLLEVRSW 317
               SCOP domains d3vkla1 A:3-154 automated matches                                                                                                                       d3v                          kla2 A:155-317 automated matches                                                                                                       SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeee....eeeee......eeeeeeeeee....eeeeeeee.........eeeeeeeeee....eeeeeeee..eee..eeee.......eeeeeeeeee..eeeeee..eeeeeee....hhhheeeeeee..eeeeeeee.....--------------------------...eeeeee.....eeeeeeeeee....eeeeeeee.....eeeeeeeeee...eeeeeeee..eee.eeee.........eeeeeeeeee..eeeeee..eeeeeee.....hhhheeeeeee..eeeeeeee Sec.struct. author
                 SAPs(SNPs) ----------------Y----------------C-------------------V-------------------------------------------------------------------------------------------------------------------------------S------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------GALECTIN  PDB: A:19-152 UniProt: 19-152                                                                                               ----------------------------------GALECTIN  PDB: A:187-317 UniProt: 187-317                                                                                           PROSITE
           Transcript 1 (1) Exon 1.6a    Exon 1.7b  PDB: A:16-45       ----------------------------------------------------------------------Exon 1.9b  PDB: A:116-155               Exon 1.10e         1.11c    Exon 1.11r  PDB: A:184-213    -------------------------------------------------------Exon 1.14j  PDB: A:269-317 UniProt: 269-317       Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------Exon 1.8b  PDB: A:45-115 UniProt: 45-115                               -------------------------------------------------------------------------------------------------Exon 1.12c  PDB: A:213-268 UniProt: 213-268             ------------------------------------------------- Transcript 1 (2)
                 3vkl A   3 LSLNNLQNIIYNPVIPFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSFSSHM--------------------------RLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIKAFVRNSFLQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHLLEVRSW 317
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152    |    -         -         - |     192       202       212       222       232       242       252       262       272       282       292       302       312     
                                                                                                                                                                                    157                        184

Chain B from PDB  Type:PROTEIN  Length:289
 aligned with LEG8_HUMAN | O00214 from UniProtKB/Swiss-Prot  Length:317

    Alignment length:315
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312     
           LEG8_HUMAN     3 LSLNNLQNIIYNPVIPFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSFSSDLQSTQASSLELTEISRENVPKSGTPQLRLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIKAFVRNSFLQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHLLEVRSW 317
               SCOP domains d3vklb1 B:3-154 automated matches                                                                                                                       d3v                          klb2 B:155-317 automated matches                                                                                                       SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeee....eeeee......eeeeeeeeee....eeeeeeee.........eeeeeeeeee....eeeeeeee..eee..eeee.......eeeeeeeeee..eeeeee..eeeeeee....hhhheeeeeee..eeeeeeee.....--------------------------...eeeeee.....eeeeeeeeee....eeeeeeee.....eeeeeeeeee...eeeeeeee..eee.eeee.........eeeeeeeeee..eeeeee..eeeeeee.....hhhheeeeeee..eeeeeeee Sec.struct. author
                 SAPs(SNPs) ----------------Y----------------C-------------------V-------------------------------------------------------------------------------------------------------------------------------S------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------GALECTIN  PDB: B:19-152 UniProt: 19-152                                                                                               ----------------------------------GALECTIN  PDB: B:187-317 UniProt: 187-317                                                                                           PROSITE
           Transcript 1 (1) Exon 1.6a    Exon 1.7b  PDB: B:16-45       ----------------------------------------------------------------------Exon 1.9b  PDB: B:116-155               Exon 1.10e         1.11c    Exon 1.11r  PDB: B:184-213    -------------------------------------------------------Exon 1.14j  PDB: B:269-317 UniProt: 269-317       Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------Exon 1.8b  PDB: B:45-115 UniProt: 45-115                               -------------------------------------------------------------------------------------------------Exon 1.12c  PDB: B:213-268 UniProt: 213-268             ------------------------------------------------- Transcript 1 (2)
                 3vkl B   3 LSLNNLQNIIYNPVIPFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSFSSHM--------------------------RLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIKAFVRNSFLQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHLLEVRSW 317
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152    |    -         -         - |     192       202       212       222       232       242       252       262       272       282       292       302       312     
                                                                                                                                                                                    157                        184

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: Concanavalin A-like lectins/glucanases (797)

Superfamily: Concanavalin A-like lectins/glucanases (797)

Family: automated matches (133)

Protein domain: automated matches (133)

Human (Homo sapiens) [TaxId: 9606] (36)

1a	d3vkla1	A:3-154
1b	d3vkla2	A:155-317
1c	d3vklb1	B:3-154
1d	d3vklb2	B:155-317

(no "CATH Domain" information available for 3VKL)

(no "Pfam Domain" information available for 3VKL)

Asymmetric Unit(hide GO term definitions)

Chain A,B (LEG8_HUMAN | O00214)

molecular function
	GO:0030246	carbohydrate binding	Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0098792	xenophagy	The macroautophagy process in which a region of cytoplasm containing an intracellular pathogen or some part of an intracellular pathogen (e.g. viral capsid) is enclosed in a double membrane bound autophagosome, which then fuses with the lysosome leading to degradation of the contents.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0005615	extracellular space	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

Asymmetric Unit
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	Cis Peptide Bonds
		Ile A:17 - Pro A:18	[ RasMol ]
		Ile B:17 - Pro B:18	[ RasMol ]
		Leu A:185 - Pro A:186	[ RasMol ]
		Leu B:185 - Pro B:186	[ RasMol ]
		Lys A:57 - Pro A:58	[ RasMol ]
		Lys B:57 - Pro B:58	[ RasMol ]

Biological Units
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	3vkl
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3vkm
3vkn
3vko
4fqz	THE SAME PROTEIN WITH A DIFFERENT CRYSTAL FORM

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 28)

Sites (27, 27)

SS Bonds (0, 0)

Cis Peptide Bonds (6, 6)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (4, 8)

PROSITE Motifs (1, 4)

Exons (8, 16)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 4)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (8, 8)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File