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(-) Description

Title :  EBOLA VIRUS NUCLEOPROTEIN BOUND TO VP35 CHAPERONING PEPTIDE P22121
 
Authors :  R. N. Kirchdoerfer, D. M. Abelson, E. O. Saphire
Date :  14 May 15  (Deposition) - 27 May 15  (Release) - 27 May 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym./Biol. Unit :  A
Keywords :  Nucleoprotein, Chaperone, Rna-Bindng (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. N. Kirchdoerfer, D. M. Abelson, S. Li, M. R. Wood, E. O. Saphire
Ebola Virus Nucleoprotein Bound To Vp35 Chaperoning Peptide P22121
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - POLYMERASE COFACTOR VP35,NUCLEOPROTEIN FUSION PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET46
    Expression System Strain: ROSETTA2 PLYSS
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP Q05127 RESIDUES 15-59, UNP P18272 RESIDUES 33-367
    Gene: VP35, NP
    Organism Common: ZEBOV
    Organism Scientific: ZAIRE EBOLAVIRUS (STRAIN MAYINGA-76)
    Organism Taxid: 128952
    Strain: MAYINGA-76
    Synonym: NUCLEOCAPSID PROTEIN,PROTEIN N

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4ZTG)

(-) Sites  (0, 0)

(no "Site" information available for 4ZTG)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4ZTG)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Ala A:223 -Gly A:224

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4ZTG)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4ZTG)

(-) Exons   (0, 0)

(no "Exon" information available for 4ZTG)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:338
                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhh............eeeeeee..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..eeeeeee.....hhhhh.....hhhhhhhhh......hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh....hhhhhhhhhhheee....eee.hhhh...hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhh...hhhhhhhhhhhhhhh............hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ztg A  -5 GPELSGWISEQLMTGRIPVSDIFCVRQRVIPVYQVNNLEEICQLIIQAFEAGVDFQESADSFLLMLCLHHAYQGDYKLFLESGAVKYLEGHGFRFEVKKRDGVKRLEELLPAVGKNIKRTLAAMPEEEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTAWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDAVISNSVAQARFSGLLIVKTVLDHILQKTERGVRLHPLARTAKVKNEVNSFKAALSSLAKHGEYAPFARLLNLSGVNNLEHGLFPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAATEAEKQL 354
                                     4        14   ||   41        51        61        71        81        91       101       111       121  ||   133      |146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346        
                                                  18|                                                                                     124|          140|                                                                                                                                                                                                                  
                                                   36                                                                                      127           144
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4ZTG)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4ZTG)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4ZTG)

(-) Gene Ontology  (24, 29)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Ala A:223 - Gly A:224   [ RasMol ]  
 

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  4ztg
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  VP35_EBOZM | Q05127
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        NCAP_EBOZM | P18272: 4qaz 4qb0 4ypi 4z9p 4zta 4zti 5t3t
        VP35_EBOZM | Q05127: 3fke 3l25 3l26 3l27 3l28 3l29 4ibb 4ibc 4ibd 4ibe 4ibf 4ibg 4ibi 4ibj 4ibk 4ije 4ijf 4ypi 4zta 4zti

(-) Related Entries Specified in the PDB File

4zta 4ZTA CONTAINS THE SAME PROTEIN IN A DIFFERENT SPACE GROUP
4zti