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(-) Description

Title :  EBOLA VIRUS NUCLEOPROTEIN BOUND TO VP35 CHAPERONING PEPTIDE I212121
 
Authors :  R. N. Kirchdoerfer, D. M. Abelson, E. O. Saphire
Date :  14 May 15  (Deposition) - 27 May 15  (Release) - 27 May 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym./Biol. Unit :  A
Keywords :  Nucleoprotein, Chaperone, Rna-Bindng, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. N. Kirchdoerfer, D. M. Abelson, S. Li, M. R. Wood, E. O. Saphire
Pdbx_descriptor Entry Title Pdbx_descriptor Ebola Virus Nucleoprotein Bound To Vp35 Chaperoning Peptide I212121
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - POLYMERASE COFACTOR VP35,NUCLEOPROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET46
    Expression System Strain: ROSETTA2 PLYSS
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP Q05127 RESIDUES 15-59,UNP P18272 RESIDUES 33-367,UNP Q05127 RESIDUES 15-59,UNP P18272 RESIDUES 33-367
    Gene: VP35, NP
    Organism Common: ZEBOV
    Organism Scientific: ZAIRE EBOLAVIRUS (STRAIN MAYINGA-76)
    Organism Taxid: 128952
    Strain: MAYINGA-76
    Synonym: NUCLEOCAPSID PROTEIN,PROTEIN N

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4ZTA)

(-) Sites  (0, 0)

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(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:18 -A:27

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:340
                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhh...hhhhh.........eeeeeee..hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.eeeeeee.....hhhhh..hhhhhhh...hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhhhheee....eee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4zta A  -6 PGPELSGWISEQLMTGRIPVSDIFCDCYASRQRVIPVYQVNNLEEICQLIIQAFEAGVDFQESADSFLLMLCLHHAYQGDYKLFLESGAVKYLEGHGFRFEVKKRDGVKRLEELLGKNIKRTLTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTAWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVHDANDAVISNSVAQARFSGLLIVKTVLDHILQKTERGVRLHPLARTAKVKNEVNSFKAALSSLAKHGEYAPFARLLNLSGVNNLEHGLFPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAATEAEKQLQQYAESR 361
                                     3        13     || 30|       46        56        66        76        86        96       106       116    || 131  ||   149       159       169       179       189       199       209       219  ||   231       241       251       261       271       281       291       301       311       321       331       341       351       361
                                                    19| 30|                                                                                 121|    134|                                                                            222|                                                                                                                                        
                                                     27  37                                                                                  127     143                                                                             225
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4ZTA)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4ZTA)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (24, 29)

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  4zta
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  VP35_EBOZM | Q05127
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        NCAP_EBOZM | P18272: 4qaz 4qb0 4ypi 4z9p 4ztg 4zti 5t3t
        VP35_EBOZM | Q05127: 3fke 3l25 3l26 3l27 3l28 3l29 4ibb 4ibc 4ibd 4ibe 4ibf 4ibg 4ibi 4ibj 4ibk 4ije 4ijf 4ypi 4ztg 4zti

(-) Related Entries Specified in the PDB File

4ztg 4zti