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(-) Description

Title :  CRYSTAL STRUCTURE OF EBOLA VIRUS NUCLEOPROTEIN CORE DOMAIN AT 1.8A RESOLUTION
 
Authors :  Y. Guo, S. S. Dong, P. Yang, G. B. Li, B. C. Liu, C. Yang, Z. H. Rao
Date :  11 Apr 15  (Deposition) - 20 May 15  (Release) - 03 Jun 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.79
Chains :  Asym./Biol. Unit :  A
Keywords :  Ebola, Filoviridae, Nucleoprotein, Rna Binding Protein, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Dong, P. Yang, G. Li, B. Liu, W. Wang, X. Liu, B. Xia, C. Yang, Z. Lou, Y. Guo, Z. Rao
Insight Into The Ebola Virus Nucleocapsid Assembly Mechanism: Crystal Structure Of Ebola Virus Nucleoprotein Core Domain At 1. 8 A Resolution.
Protein Cell V. 6 351 2015
PubMed-ID: 25910597  |  Reference-DOI: 10.1007/S13238-015-0163-3

(-) Compounds

Molecule 1 - NUCLEOPROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: CORE DOMAIN (UNP RESIDUES 36-351)
    Gene: NP
    Organism Common: ZEBOV
    Organism Scientific: ZAIRE EBOLAVIRUS (STRAIN MAYINGA-76)
    Organism Taxid: 128952
    Strain: MAYINGA-76
    Synonym: NUCLEOCAPSID PROTEIN,PROTEIN N

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4Z9P)

(-) Sites  (0, 0)

(no "Site" information available for 4Z9P)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4Z9P)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4Z9P)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4Z9P)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4Z9P)

(-) Exons   (0, 0)

(no "Exon" information available for 4Z9P)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:293
                                                                                                                                                                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeee..hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..eeeeeee.....hhhhhh..hhhhhhhhh....hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh...hhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4z9p A  35 AVRQRVIPVYQVNNLEEICQLIIQAFEAGVDFQESADSFLLMLCLHHAYQGDYKLFLESGAVKYLEGHGFRFEVKKRDGVKRLEELLPGKNIKRTLAAMPEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTAWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDAVISNSVAQARFSGLLIVKTVLDHILQVRLHPLARTAKVKNEVNSFKAALSSLAKHGEYAPFARLLNLSGVNNLEHGLFPQLSAIALGVATNVGEQYQQLREAATEA 350
                                    44        54        64        74        84        94       104       114       128       138|      153       163       173       183       193       203       213       223       233       243       253  ||   268       278       288       298       308       318      |337       347   
                                                                                                                 122|        138|                                                                                                             256|                                                            325|               
                                                                                                                  127         144                                                                                                              262                                                             335
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4Z9P)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4Z9P)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4Z9P)

(-) Gene Ontology  (8, 8)

Asymmetric/Biological Unit(hide GO term definitions)

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(no "Cis Peptide Bonds" information available for 4z9p)
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        NCAP_EBOZM | P18272: 4qaz 4qb0 4ypi 4zta 4ztg 4zti 5t3t

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4Z9P)