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(-) Description

Title :  CRYSTAL STRUCTURE OF A GNAT SUPERFAMILY ACETYLTRANSFERASE PA4794 IN COMPLEX WITH COVALENTLY BOUND COA
 
Authors :  K. A. Majorek, M. Chruszcz, E. Maclean, A. Joachimiak, W. Minor, Midwes For Structural Genomics (Mcsg)
Date :  16 Jun 13  (Deposition) - 10 Jul 13  (Release) - 07 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics, Psi-Biology, Midwest Center For Structural Genomics, Mcsg, Gnat, Acetyltransferase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. A. Majorek, M. L. Kuhn, M. Chruszcz, W. F. Anderson, W. Minor
Structural, Functional, And Inhibition Studies Of A Gcn5-Related N-Acetyltransferase (Gnat) Superfamily Protein Pa4794: A New C-Terminal Lysine Protein Acetyltransferase From Pseudomonas Aeruginosa.
J. Biol. Chem. V. 288 30223 2013
PubMed-ID: 24003232  |  Reference-DOI: 10.1074/JBC.M113.501353

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: P11
    Expression System Strain: BL21(DE3) RIL
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: PA4794
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 208964
    Strain: PAO1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 10)

Asymmetric/Biological Unit (3, 10)
No.NameCountTypeFull Name
1COA1Ligand/IonCOENZYME A
2EDO7Ligand/Ion1,2-ETHANEDIOL
3SO42Ligand/IonSULFATE ION

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLN A:60 , ARG A:141 , HIS A:142 , HOH A:428BINDING SITE FOR RESIDUE SO4 A 201
02AC2SOFTWAREARG A:50 , GLY A:51 , HOH A:430BINDING SITE FOR RESIDUE SO4 A 202
03AC3SOFTWAREGLN A:69 , TRP A:70BINDING SITE FOR RESIDUE EDO A 203
04AC4SOFTWAREARG A:23 , ILE A:34 , TRP A:35 , HOH A:389BINDING SITE FOR RESIDUE EDO A 204
05AC5SOFTWAREASP A:24 , ASP A:143 , HOH A:401 , HOH A:466BINDING SITE FOR RESIDUE EDO A 205
06AC6SOFTWARETHR A:10 , GLY A:11 , LEU A:13 , GLU A:14 , ARG A:148 , COA A:210BINDING SITE FOR RESIDUE EDO A 206
07AC7SOFTWAREARG A:141 , GLN A:153BINDING SITE FOR RESIDUE EDO A 207
08AC8SOFTWAREARG A:50 , TRP A:70 , HIS A:72BINDING SITE FOR RESIDUE EDO A 208
09AC9SOFTWAREGLN A:134 , ARG A:136 , HOH A:356 , HOH A:436BINDING SITE FOR RESIDUE EDO A 209
10BC1SOFTWAREGLY A:11 , TYR A:28 , CYS A:29 , MET A:81 , MET A:82 , VAL A:83 , ARG A:88 , GLY A:89 , LEU A:90 , GLY A:91 , VAL A:92 , ALA A:93 , ARG A:94 , ASN A:121 , ALA A:123 , LEU A:126 , LEU A:127 , GLN A:130 , ARG A:148 , EDO A:206 , HOH A:317 , HOH A:319 , HOH A:332 , HOH A:357 , HOH A:375 , HOH A:423BINDING SITE FOR RESIDUE COA A 210

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4L89)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Trp A:35 -Pro A:36

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4L89)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4L89)

(-) Exons   (0, 0)

(no "Exon" information available for 4L89)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:159
                                                                                                                                                                                               
               SCOP domains d4l89a_ A: Putative acetyltransferase PA4794                                                                                                                    SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee.hhhhhhhhhh...hhhhhhhhh.......hhhhhhhhhhh.eeeeeeee..eeeeeeeeeeee...eeeeeeeee.hhhh..hhhhhhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhhh..eeeeeeeee.....eeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4l89 A   1 MQLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHDPDGRRVALIQMDKPLE 159
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4L89)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4L89)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Trp A:35 - Pro A:36   [ RasMol ]  
 

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  4l89
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9HV14_PSEAE | Q9HV14: 3kkw 3pgp 4klv 4klw 4kor 4kos 4kot 4kou 4kov 4kow 4kox 4koy 4kua 4kub 4l8a 4m3s 4oad 4oae

(-) Related Entries Specified in the PDB File

3pgp IN COMPLEX WITH ACCOA
4klv IN COMPLEX WITH 4-METHYLUMBELLIFERYL PHOSPHATE
4klw IN COMPLEX WITH 2 (AMINOCARBONYL)BENZOATE
4kor IN COMPLEX WITH 7 AMINOCEPHALOSPORANIC ACID
4kos IN COMPLEX WITH CEFMETAZOLE
4kot IN COMPLEX WITH CEFOTAXIME
4kou IN COMPLEX WITH CEFIXIME
4kov IN COMPLEX WITH CEFUROXIME
4kow IN COMPLEX WITH CEFOXITIN
4kox IN COMPLEX WITH CEFALOTIN
4koy IN COMPLEX WITH CEPHALOSPORIN C
4kua APO FORM
4kub IN COMPLEX WITH COA RELATED ID: MCSG-APC102304 RELATED DB: TARGETTRACK