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(-) Description

Title :  CRYSTAL STRUCTURE OF A GNAT SUPERFAMILY ACETYLTRANSFERASE PA4794 IN COMPLEX WITH 7-AMINOCEPHALOSPORANIC ACID
 
Authors :  K. A. Majorek, P. J. Porebski, M. Chruszcz, A. Joachimiak, W. Minor, Mid Center For Structural Genomics (Mcsg)
Date :  12 May 13  (Deposition) - 05 Jun 13  (Release) - 13 Nov 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.25
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (2x)
Keywords :  Structural Genomics, Psi-Biology, Midwest Center For Structural Genomics, Mcsg, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. A. Majorek, M. L. Kuhn, M. Chruszcz, W. F. Anderson, W. Minor
Structural, Functional, And Inhibition Studies Of A Gcn5-Related N-Acetyltransferase (Gnat) Superfamily Protein Pa4794: A New C-Terminal Lysine Protein Acetyltransferase From Pseudomonas Aeruginosa.
J. Biol. Chem. V. 288 30223 2013
PubMed-ID: 24003232  |  Reference-DOI: 10.1074/JBC.M113.501353

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: P11
    Expression System Strain: BL21 (DE3) RIL
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: PA4794
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 208964
    Strain: PAO1

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 10)

Asymmetric Unit (3, 10)
No.NameCountTypeFull Name
14KR1Ligand/Ion7-AMINOCEPHALOSPORANIC ACID
2EDO6Ligand/Ion1,2-ETHANEDIOL
3SO43Ligand/IonSULFATE ION
Biological Unit 1 (3, 10)
No.NameCountTypeFull Name
14KR1Ligand/Ion7-AMINOCEPHALOSPORANIC ACID
2EDO6Ligand/Ion1,2-ETHANEDIOL
3SO43Ligand/IonSULFATE ION
Biological Unit 2 (3, 20)
No.NameCountTypeFull Name
14KR2Ligand/Ion7-AMINOCEPHALOSPORANIC ACID
2EDO12Ligand/Ion1,2-ETHANEDIOL
3SO46Ligand/IonSULFATE ION

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETYR A:28 , CYS A:29 , TYR A:30 , PRO A:31 , ARG A:49 , TYR A:68 , LEU A:78 , GLY A:79 , ASN A:80 , MET A:81 , SER A:116 , HOH A:302 , HOH A:455 , HOH A:538 , HOH A:557BINDING SITE FOR RESIDUE 4KR A 201
02AC2SOFTWAREGLY A:89 , LEU A:90 , GLY A:91 , VAL A:92 , ALA A:93 , ARG A:94 , LEU A:127 , HOH A:345 , HOH A:386 , HOH A:498 , HOH A:525BINDING SITE FOR RESIDUE SO4 A 202
03AC3SOFTWAREARG A:50 , GLY A:51 , HOH A:314 , HOH A:485 , HOH A:495 , HOH A:545BINDING SITE FOR RESIDUE SO4 A 203
04AC4SOFTWAREGLN A:60 , ARG A:141 , HIS A:142 , HOH A:457 , HOH A:467 , HOH A:516BINDING SITE FOR RESIDUE SO4 A 204
05AC5SOFTWAREARG A:50 , TRP A:70 , HOH A:413 , HOH A:449BINDING SITE FOR RESIDUE EDO A 205
06AC6SOFTWAREGLY A:18 , GLN A:21 , ALA A:110 , ARG A:111 , LEU A:158 , GLU A:159 , HOH A:513BINDING SITE FOR RESIDUE EDO A 206
07AC7SOFTWAREARG A:141 , GLN A:153 , HOH A:451BINDING SITE FOR RESIDUE EDO A 207
08AC8SOFTWAREHIS A:5 , VAL A:99 , ASN A:102 , HOH A:324 , HOH A:353 , HOH A:491BINDING SITE FOR RESIDUE EDO A 208
09AC9SOFTWAREARG A:136BINDING SITE FOR RESIDUE EDO A 209
10BC1SOFTWAREGLU A:25 , CYS A:29 , MET A:82 , VAL A:83 , ARG A:88 , HOH A:405 , HOH A:510BINDING SITE FOR RESIDUE EDO A 210

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4KOR)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Trp A:35 -Pro A:36

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4KOR)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4KOR)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:159
                                                                                                                                                                                               
               SCOP domains d4kora_ A: Putative acetyltransferase PA4794                                                                                                                    SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee.hhhhhhhhhh...hhhhhhhhh.......hhhhhhhhhhhheeeeeeee..eeeeeeeeeeee...eeeeeeeee.hhhh..hhhhhhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhhh..eeeeeeeee.....eeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4kor A   1 MQLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHDPDGRRVALIQMDKPLE 159
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4KOR)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4KOR)

(-) Gene Ontology  (4, 4)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9HV14_PSEAE | Q9HV14: 3kkw 3pgp 4klv 4klw 4kos 4kot 4kou 4kov 4kow 4kox 4koy 4kua 4kub 4l89 4l8a 4m3s 4oad 4oae

(-) Related Entries Specified in the PDB File

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4klw IN COMPLEX WITH 2-(AMINOCARBONYL)BENZOATE
4kos IN COMPLEX WITH CEFMETAZOLE
4kot IN COMPLEX WITH CEFOTAXIME
4kou IN COMPLEX WITH CEFIXIME
4kov IN COMPLEX WITH CEFUROXIME
4kow IN COMPLEX WITH CEFOXITIN
4kox IN COMPLEX WITH CEFALOTIN
4koy IN COMPLEX WITH CEPHALOSPORIN C
4kua APO FORM
4kub IN COMPLEX WITH COA RELATED ID: MCSG-APC102304 RELATED DB: TARGETTRACK