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(-) Description

Title :  CRYSTAL STRUCTURE OF A GNAT SUPERFAMILY ACETYLTRANSFERASE PA4794 IN COMPLEX WITH CEFOXITIN
 
Authors :  K. A. Majorek, P. J. Porebski, M. Chruszcz, M. Grabowski, A. Joachimiak Midwest Center For Structural Genomics (Mcsg)
Date :  12 May 13  (Deposition) - 05 Jun 13  (Release) - 13 Nov 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.45
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (2x)
Keywords :  Structural Genomics, Psi-Biology, Midwest Center For Structural Genomics, Mcsg, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  K. A. Majorek, M. L. Kuhn, M. Chruszcz, W. F. Anderson, W. Minor
Structural, Functional, And Inhibition Studies Of A Gcn5-Related N-Acetyltransferase (Gnat) Superfamily Protein Pa4794: A New C-Terminal Lysine Protein Acetyltransferase From Pseudomonas Aeruginosa.
J. Biol. Chem. V. 288 30223 2013
PubMed-ID: 24003232  |  Reference-DOI: 10.1074/JBC.M113.501353

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidP11
    Expression System StrainBL21 (DE3) RIL
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    GenePA4794
    Organism ScientificPSEUDOMONAS AERUGINOSA
    Organism Taxid208964
    StrainPAO1

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit A
Biological Unit 1 (1x)A
Biological Unit 2 (2x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 19)

Asymmetric Unit (3, 19)
No.NameCountTypeFull Name
1CFX1Ligand/IonCEFOXITIN
2EDO15Ligand/Ion1,2-ETHANEDIOL
3SO43Ligand/IonSULFATE ION
Biological Unit 1 (3, 19)
No.NameCountTypeFull Name
1CFX1Ligand/IonCEFOXITIN
2EDO15Ligand/Ion1,2-ETHANEDIOL
3SO43Ligand/IonSULFATE ION
Biological Unit 2 (3, 38)
No.NameCountTypeFull Name
1CFX2Ligand/IonCEFOXITIN
2EDO30Ligand/Ion1,2-ETHANEDIOL
3SO46Ligand/IonSULFATE ION

(-) Sites  (18, 18)

Asymmetric Unit (18, 18)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLY A:89 , LEU A:90 , GLY A:91 , VAL A:92 , ALA A:93 , ARG A:94 , LEU A:127 , HOH A:311 , HOH A:336 , HOH A:379 , HOH A:453BINDING SITE FOR RESIDUE SO4 A 201
02AC2SOFTWAREARG A:141 , GLN A:153 , HOH A:392 , HOH A:415BINDING SITE FOR RESIDUE SO4 A 202
03AC3SOFTWAREARG A:50 , GLY A:51 , HOH A:332 , HOH A:358BINDING SITE FOR RESIDUE SO4 A 203
04AC4SOFTWARETYR A:28 , CYS A:29 , PRO A:31 , ARG A:49 , TYR A:68 , GLY A:79 , ASN A:80 , MET A:81 , SER A:116 , PHE A:118 , TYR A:128 , ARG A:141 , HIS A:142 , EDO A:215 , HOH A:306 , HOH A:312 , HOH A:322 , HOH A:377 , HOH A:438BINDING SITE FOR RESIDUE CFX A 204
05AC5SOFTWAREGLU A:14 , ALA A:17 , GLY A:18 , PHE A:37 , HIS A:72 , ARG A:111 , HOH A:328 , HOH A:341BINDING SITE FOR RESIDUE EDO A 205
06AC6SOFTWARETYR A:68 , SER A:116 , GLN A:153 , EDO A:217 , HOH A:312 , HOH A:457 , HOH A:483BINDING SITE FOR RESIDUE EDO A 206
07AC7SOFTWARESER A:4 , HIS A:5 , ARG A:6 , ASP A:145 , HOH A:410BINDING SITE FOR RESIDUE EDO A 208
08AC8SOFTWAREALA A:8 , GLU A:9 , THR A:10 , EDO A:218 , HOH A:443BINDING SITE FOR RESIDUE EDO A 209
09AC9SOFTWARETYR A:30 , LYS A:32 , GLN A:41BINDING SITE FOR RESIDUE EDO A 210
10BC1SOFTWARELEU A:126 , THR A:129 , GLN A:130 , ILE A:138 , GLU A:140 , HOH A:381BINDING SITE FOR RESIDUE EDO A 211
11BC2SOFTWAREASP A:24 , PHE A:27 , ASP A:143 , HOH A:346BINDING SITE FOR RESIDUE EDO A 212
12BC3SOFTWAREGLU A:25 , MET A:82 , VAL A:83 , ARG A:88 , HOH A:465BINDING SITE FOR RESIDUE EDO A 213
13BC4SOFTWAREGLY A:18 , GLN A:21 , ARG A:111 , HOH A:408BINDING SITE FOR RESIDUE EDO A 214
14BC5SOFTWAREARG A:141 , HIS A:142 , CFX A:204 , HOH A:418BINDING SITE FOR RESIDUE EDO A 215
15BC6SOFTWARETYR A:68 , GLN A:69 , TRP A:70 , GLN A:71BINDING SITE FOR RESIDUE EDO A 216
16BC7SOFTWARELYS A:114 , GLN A:153 , MET A:154 , ASP A:155 , EDO A:206 , HOH A:457 , HOH A:483 , HOH A:485BINDING SITE FOR RESIDUE EDO A 217
17BC8SOFTWAREGLU A:9 , THR A:10 , EDO A:209 , HOH A:314BINDING SITE FOR RESIDUE EDO A 218
18BC9SOFTWAREARG A:50 , TRP A:70BINDING SITE FOR RESIDUE EDO A 219

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4KOW)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Trp A:35 -Pro A:36

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4KOW)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4KOW)

(-) Exons   (0, 0)

(no "Exon" information available for 4KOW)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:159
                                                                                                                                                                                               
               SCOP domains d4kowa_ A: Putative acetyltransferase PA4794                                                                                                                    SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee.hhhhhhhhhh...hhhhhhhhh.......hhhhhhhhhhhheeeeeeee..eeeeeeeeeeee...eeeeeeeee.hhhh..hhhhhhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhhh..eeeeeeeee.....eeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4kow A   1 MQLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHDPDGRRVALIQMDKPLE 159
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150         

   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4KOW)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4KOW)

(-) Gene Ontology  (4, 4)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9HV14_PSEAE | Q9HV143kkw 3pgp 4klv 4klw 4kor 4kos 4kot 4kou 4kov 4kox 4koy 4kua 4kub 4l89 4l8a 4m3s 4oad 4oae

(-) Related Entries Specified in the PDB File

3pgp IN COMPLEX WITH ACCOA
4klv IN COMPLEX WITH 4-METHYLUMBELLIFERYL PHOSPHATE
4klw IN COMPLEX WITH 2-(AMINOCARBONYL)BENZOATE
4kor IN COMPLEX WITH 7-AMINOCEPHALOSPORANIC ACID
4kos IN COMPLEX WITH CEFMETAZOLE
4kot IN COMPLEX WITH CEFOTAXIME
4kou IN COMPLEX WITH CEFIXIME
4kov IN COMPLEX WITH CEFUROXIME
4kox IN COMPLEX WITH CEFALOTIN
4koy IN COMPLEX WITH CEPHALOSPORIN C
4kua APO FORM
4kub IN COMPLEX WITH COA RELATED ID: MCSG-APC102304 RELATED DB: TARGETTRACK