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(-) Description

Title :  ANTHRAX TOXIN LETHAL FACTOR WITH BOUND SMALL MOLECULE INHIBITOR MK-31
 
Authors :  K. M. Maize, T. De La Mora-Rey, B. C. Finzel
Date :  12 Sep 14  (Deposition) - 09 Sep 15  (Release) - 25 Nov 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.65
Chains :  Asym./Biol. Unit :  A
Keywords :  Anthrax Toxin, Lethal Factor, Metalloproteinase, Metalloprotease, Hydrolase-Hydrolase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  E. K. Kurbanov, T. L. Chiu, J. Solberg, S. Francis, K. M. Maize, J. Fernandez, R. L. Johnson, J. E. Hawkinson, M. A. Walters, B. C. Finzel, E. A. Amin
Probing The S2' Subsite Of The Anthrax Toxin Lethal Factor Using Novel N-Alkylated Hydroxamates.
J. Med. Chem. V. 58 8723 2015
PubMed-ID: 26492514  |  Reference-DOI: 10.1021/ACS.JMEDCHEM.5B01446
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - LETHAL FACTOR
    ChainsA
    EC Number3.4.24.83
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPMCSG10
    Expression System StrainROSETTA 2 PLYSS
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentUNP RESIDUES 298-809
    GeneLEF, PXO1-107, BXA0172, GBAA_PXO1_0172
    MutationYES
    Organism ScientificBACILLUS ANTHRACIS
    Organism Taxid1392
    SynonymLF,ANTHRAX LETHAL TOXIN ENDOPEPTIDASE COMPONENT

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 3)

Asymmetric/Biological Unit (3, 3)
No.NameCountTypeFull Name
14071Ligand/IonN~2~-[(4-FLUORO-3-METHYLPHENYL)SULFONYL]-N-HYDROXY-D-ALANINAMIDE
2EDO1Ligand/Ion1,2-ETHANEDIOL
3ZN1Ligand/IonZINC ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:686 , HIS A:690 , GLU A:735 , 407 A:802binding site for residue ZN A 801
2AC2SOFTWAREASP A:328 , SER A:655 , LYS A:656 , GLY A:657 , LEU A:658 , VAL A:675 , LEU A:677 , HIS A:686 , GLU A:687 , HIS A:690 , TYR A:728 , GLU A:735 , GLU A:739 , ARG A:742 , ZN A:801 , EDO A:803binding site for residue 407 A 802
3AC3SOFTWARELEU A:658 , TYR A:659 , HIS A:690 , 407 A:802binding site for residue EDO A 803

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4WF6)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4WF6)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4WF6)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4WF6)

(-) Exons   (0, 0)

(no "Exon" information available for 4WF6)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:503
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhh.hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh..hhhhhhhh...hhhhhhhhhhhhhhh...hhhhhhhhhh........hhhhhhhhhhhhhhhhhhh.............eeeeeehhhhhhhhhh...........hhhhhhhhhhh..eeee....eee.........eeeeeeee......eeee...eeee...eeeeeeeeeeee....eeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhhh.......eeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee..hhhhhhhhhh...hhhhh....eeee....eeeee.........hhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wf6 A 266 SRYEKWEKIKQHYQHWSDSLSEEGRGLLKKLQIPIEPKKDDIIHSLSQEEKELLKRIQIDSSDFLSTEEKEFLKKLQIDIRDSLSEEEKELLNPLSEKEKEFLKKLKLDIQPYDINQRLQDTGGLIDSPSINLDVRKQYKRDIQNIDALLHQSIGSTLYNKIYLYENMNINNLTATLGADLVDSTDNTKINRGIFNEFKKNFKYSISSNYMIVDINERPALDNERLKWRIQLSPDTRAGYLENGKLILQRNIGLEIKDVQIIKQSEKEYIRIDAKVVPKSKIDTKIQEAQLNINQEWNKALGLPKYTKLITFNVHNRYASNIVESAYLILNEWKNNIQSDLIKKVTNYLVDGNGRFVFTDITLPNIAEQYTHQDEIYEQVHSKGLYVPESRSILLHGPSKGVELRNDSEGFIHEFGHAVDDYAGYLLDKNQSDLVTNSKKFIDIFKEEGSNLTSYGRTNEAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQIKFIINS 776
                                   275       285       295       305       315       325       335       345       355 ||    373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773   
                                                                                                                     357|                                                                                                                                                                                                                                                                                                                                                                                                                          
                                                                                                                      366                                                                                                                                                                                                                                                                                                                                                                                                                          

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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4WF6)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4WF6)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4WF6)

(-) Gene Ontology  (21, 21)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        LEF_BACAN | P159171j7n 1jky 1pwp 1pwq 1pwu 1pwv 1pww 1yqy 1zxv 2l0r 3kwv 4dv8 4pkq 4pkr 4pks 4pkt 4pku 4pkv 4pkw 4xm6 4xm7 4xm8 5d1s 5d1t 5d1u

(-) Related Entries Specified in the PDB File

1yqy 4pkq 4pkr 4pks 4pkt 4pku 4pkv 4pkw 5d1s 5d1t 5d1u