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(-) Description

Title :  CRYSTAL STRUCTURE OF FGF RECEPTOR (FGFR) 4 TYROSINE KINASE DOMAIN
 
Authors :  Z. Huang, M. Mohammadi
Date :  29 Jun 14  (Deposition) - 29 Oct 14  (Release) - 28 Jan 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym./Biol. Unit :  A
Keywords :  Kinase Domain Fold, Cell Signaling, Phosphotransferase, Plasmamembrane, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Z. Huang, L. Tan, H. Wang, Y. Liu, S. Blais, J. Deng, T. A. Neubert, N. S. Gray, X. Li, M. Mohammadi
Dfg-Out Mode Of Inhibition By An Irreversible Type-1 Inhibitor Capable Of Overcoming Gate-Keeper Mutations In Fg Receptors.
Acs Chem. Biol. V. 10 299 2015
PubMed-ID: 25317566  |  Reference-DOI: 10.1021/CB500674S

(-) Compounds

Molecule 1 - FIBROBLAST GROWTH FACTOR RECEPTOR 4
    Chains: A
    EC Number: 2.7.10.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: TYROSINE KINASE DOMAIN OF FGF RECEPTOR 4
    Gene: FGFR4, JTK2, TKF
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: FGFR-4

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1SO42Ligand/IonSULFATE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:616 , THR A:646 , ASN A:648 , ARG A:650BINDING SITE FOR RESIDUE SO4 A 801
2AC2SOFTWAREARG A:563 , ARG A:566 , GLY A:687 , SER A:688BINDING SITE FOR RESIDUE SO4 A 802

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4QQT)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4QQT)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4QQT)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4QQT)

(-) Exons   (0, 0)

(no "Exon" information available for 4QQT)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:283
                                                                                                                                                                                                                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhh.eeeeeeee..eeeeeeee.........eeeeeeee...hhhhhhhhhhhhhhhhhhh.......eeeee......eeeee.....hhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee.....eee.......hhhhh..........hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhh..........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qqt A 454 LPLDPLWEFPRDRLVLGKPLGEGQVVRAEAFGMDPARPDQASTVAVKMLKASDKDLADLVSEMEVMKLIGRHKNIINLLGVCTQEGPLYVIVECAAKGNLREFLRARRPPRSSEGPLSFPVLVSCAYQVARGMQYLESRKCIHRDLAARNVLVTEDNVMKIADFGLARGVHHIDYYKKTSNGRLPVKWMAPEALFDEVYTHQSDVWSFGILLWEIFTLGGSPYPGIPVEELFSLLREGHRMDRPPHCPPELYGLMRECWHAAPSQRPTFKQLVEALDKVLLAV 750
                                   463       473 ||    486       496       506|      518       528       538       548       558       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737       747   
                                               475|                        506|                                                       567|                                                                                                                                                                             
                                                479                         509                                                        577
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4QQT)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4QQT)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4QQT)

(-) Gene Ontology  (51, 51)

Asymmetric/Biological Unit(hide GO term definitions)

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  4qqt
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  FGFR4_HUMAN | P22455
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  2.7.10.1
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FGFR4_HUMAN | P22455: 1qct 4qq5 4qqc 4qqj 4qrc 4r6v 4tye 4tyg 4tyi 4tyj 4uxq 4xcu 5jkg

(-) Related Entries Specified in the PDB File

4qq5 4qqc 4qqj