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(-) Description

Title :  CRYSTAL STRUCTURE OF FGFR4 WITH AN IRREVERSIBLE INHIBITOR
 
Authors :  J. L. Kim, C. Miduturu, B. Hodous, N. Brooijmans, N. Bifulco, T. Guzi
Date :  18 Dec 14  (Deposition) - 01 Apr 15  (Release) - 22 Apr 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.71
Chains :  Asym./Biol. Unit :  A
Keywords :  Receptor Tyrosine Kinase, Hepatocellular Carcinoma, Transferase- Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Hagel, C. Miduturu, M. Sheets, N. Rubin, W. Weng, N. Stransky, N. Bifulco, J. L. Kim, B. Hodous, N. Brooijmans, A. Shutes, C. Winter, C. Lengauer, N. E. Kohl, T. Guzi
First Selective Small Molecule Inhibitor Of Fgfr4 For The Treatment Of Hepatocellular Carcinomas With An Activated Fgfr4 Signaling Pathway.
Cancer Discov V. 5 424 2015
PubMed-ID: 25776529  |  Reference-DOI: 10.1158/2159-8290.CD-14-1029

(-) Compounds

Molecule 1 - FIBROBLAST GROWTH FACTOR RECEPTOR 4
    Chains: A
    EC Number: 2.7.10.1
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Taxid: 7108
    Fragment: UNP RESIDUES 449-751
    Gene: FGFR4, JTK2, TKF
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: FGFR-4

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
140M1Ligand/IonN-(2-{[6-(2,6-DICHLORO-3,5-DIMETHOXYPHENYL)QUINAZOLIN-2-YL]AMINO}-3-METHYLPHENYL)PROP-2-ENAMIDE
2SO41Ligand/IonSULFATE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:528 , ARG A:529 , ARG A:563 , ARG A:566 , HOH A:1120 , HOH A:1135 , HOH A:1155binding site for residue SO4 A 1001
2AC2SOFTWARELYS A:503 , GLU A:520 , MET A:524 , ILE A:534 , VAL A:548 , VAL A:550 , GLU A:551 , CYS A:552 , ALA A:553 , LEU A:619 , ALA A:629 , ASP A:630 , HOH A:1201binding site for residue 40M A 1002

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4XCU)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4XCU)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4XCU)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4XCU)

(-) Exons   (0, 0)

(no "Exon" information available for 4XCU)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:288
                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..........hhh.eeeeeeee..eeeeeeee.........eeeeeeee.....hhhhhhhhhhhhhhhhhhh.......eeeee......eeeee....eehhhhhhh...........hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee.....eee......................hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhh..........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4xcu A 453 DLPLDPLWEFPRDRLVLGKPLGEGQVVRAEAFGMDPARPDQASTVAVKMLKDNASDKDLADLVSEMEVMKLIGRHKNIINLLGVCTQEGPLYVIVECAAKGNLREFLRARRPPGSSEGPLSFPVLVSCAYQVARGMQYLESRKCIHRDLAARNVLVTEDNVMKIADFGLARGVHHIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILLWEIFTLGGSPYPGIPVEELFSLLREGHRMDRPPHCPPELYGLMRECWHAAPSQRPTFKQLVEALDKVLLAVSH 752
                                   462       472  ||   485       495       505       515       525       535       545       555       565   ||  584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734       744        
                                                475|                                                                                       569|                                                                                                                                                                             
                                                 479                                                                                        579
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4XCU)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4XCU)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4XCU)

(-) Gene Ontology  (51, 51)

Asymmetric/Biological Unit(hide GO term definitions)

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  4xcu
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  FGFR4_HUMAN | P22455
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  2.7.10.1
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FGFR4_HUMAN | P22455: 1qct 4qq5 4qqc 4qqj 4qqt 4qrc 4r6v 4tye 4tyg 4tyi 4tyj 4uxq 5jkg

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4XCU)