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(-) Description

Title :  CRYSTAL STRUCTURE OF METHANOCALDOCOCCUS JANNASCHII DIMERIC SELECASE
 
Authors :  M. Lopez-Pelegrin, N. Cerda-Costa, A. Cintas-Pedrola, F. Herranz-Tr P. Bernado, J. R. Peinado, J. L. Arolas, F. X. Gomis-Ruth
Date :  28 May 14  (Deposition) - 16 Jul 14  (Release) - 22 Oct 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Minigluzincin, Proteolytic Enzyme, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Lopez-Pelegrin, N. Cerda-Costa, A. Cintas-Pedrola, F. Herranz-Trillo, P. Bernado, J. R. Peinado, J. L. Arolas, F. X. Gomis-Ruth
Multiple Stable Conformations Account For Reversible Concentration-Dependent Oligomerization And Autoinhibition Of A Metamorphic Metallopeptidase
Angew. Chem. Int. Ed. Engl. V. 53 10624 2014
PubMed-ID: 25159620  |  Reference-DOI: 10.1002/ANIE.201405727

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN MJ1213
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: MJ1213
    Organism Scientific: METHANOCALDOCOCCUS JANNASCHII
    Organism Taxid: 243232
    Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric Unit (2, 3)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2ZN1Ligand/IonZINC ION
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1GOL4Ligand/IonGLYCEROL
2ZN-1Ligand/IonZINC ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:69 , GLU A:70 , HIS A:73 , HIS A:107 , HOH A:332BINDING SITE FOR RESIDUE ZN A 201
2AC2SOFTWAREASN A:104 , HIS A:107 , HOH A:324BINDING SITE FOR RESIDUE GOL A 202

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4QHG)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
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Chain A from PDB  Type:PROTEIN  Length:108
                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh.........eeeee......eeee....eeeee..hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 4qhg A   3 DRKILNEILSNTINELNLNDKKANIKIKIKPLKRKIASISLTNKTIYINKNILPYLSDEEIRFILAHELLHLKYGKYHINEFEEELLFLFPNKEAILINLINKLHQKK 110
                                    12        22        32        42        52        62        72        82        92       102
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4QHG)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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  Y1213_METJA | Q58610
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        Y1213_METJA | Q58610: 4qhf 4qhh 4qhi 4qhj

(-) Related Entries Specified in the PDB File

4jiu PYROCOCCUS ABYSSI ABYLYSIN
4jix METHANOCALDOCOCCUS JANNASCHII JANNALYSIN
4qhf METHANOCALDOCOCCUS JANNASCHII MONOMERIC SELECASE
4qhh METHANOCALDOCOCCUS JANNASCHII TETRAMERIC SELECASE
4qhi METHANOCALDOCOCCUS JANNASCHII SELECASE MUTANT R36W
4qhj METHANOCALDOCOCCUS JANNASCHII SELECASE MUTANT I100F+H107F