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(-) Description

Title :  CRYSTAL STRUCTURE OF METHANOCALDOCOCCUS JANNASCHII MONOMERIC SELECASE
 
Authors :  M. Lopez-Pelegrin, N. Cerda-Costa, A. Cintas-Pedrola, F. Herranz-Tr P. Bernado, J. R. Peinado, J. L. Arolas, F. X. Gomis-Ruth
Date :  28 May 14  (Deposition) - 16 Jul 14  (Release) - 22 Oct 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym./Biol. Unit :  A
Keywords :  Minigluzincin, Proteolytic Enzyme, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Lopez-Pelegrin, N. Cerda-Costa, A. Cintas-Pedrola, F. Herranz-Trillo, P. Bernado, J. R. Peinado, J. L. Arolas, F. X. Gomis-Ruth
Multiple Stable Conformations Account For Reversible Concentration-Dependent Oligomerization And Autoinhibition Of A Metamorphic Metallopeptidase
Angew. Chem. Int. Ed. Engl. V. 53 10624 2014
PubMed-ID: 25159620  |  Reference-DOI: 10.1002/ANIE.201405727

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN MJ1213
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: MJ1213
    Organism Scientific: METHANOCALDOCOCCUS JANNASCHII
    Organism Taxid: 243232
    Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2NI1Ligand/IonNICKEL (II) ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:69 , HIS A:73 , HIS A:80 , HOH A:315 , HOH A:334BINDING SITE FOR RESIDUE NI A 201
2AC2SOFTWARETYR A:79 , HIS A:80BINDING SITE FOR RESIDUE GOL A 202

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4QHF)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4QHF)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4QHF)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4QHF)

(-) Exons   (0, 0)

(no "Exon" information available for 4QHF)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:109
                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhh.hhhhh...eeeee......eeee....eeeee..hhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhh.hhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 4qhf A   1 MKDRKILNEILSNTINELNLNDKKANIKIKIKPLKRKIASISLTNKTIYINKNILPYLSDEEIRFILAHELLHLKYGKYHINEFEEELLFLFPNKEAILINLINKLHQK 109
                                    10        20        30        40        50        60        70        80        90       100
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4QHF)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4QHF)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4QHF)

(-) Gene Ontology  (0, 0)

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  Y1213_METJA | Q58610
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        Y1213_METJA | Q58610: 4qhg 4qhh 4qhi 4qhj

(-) Related Entries Specified in the PDB File

4jiu PYROCOCCUS ABYSSI ABYLYSIN
4jix METHANOCALDOCOCCUS JANNASCHII JANNALYSIN
4qhg METHANOCALDOCOCCUS JANNASCHII DIMERIC SELECASE
4qhh METHANOCALDOCOCCUS JANNASCHII TETRAMERIC SELECASE
4qhi METHANOCALDOCOCCUS JANNASCHII SELECASE MUTANT R36W
4qhj METHANOCALDOCOCCUS JANNASCHII SELECASE MUTANT I100F+H107F