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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN MYELOPEROXIDASE WITH COVALENT THIOXANTHINE ANALOG
 
Authors :  F. Vajdos, A. Varghese
Date :  05 Feb 12  (Deposition) - 21 Mar 12  (Release) - 09 May 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  E,F,G,H  (1x)
Biol. Unit 3:  I,J,K,L  (1x)
Biol. Unit 4:  M,N,O,P  (1x)
Biol. Unit 5:  A,C  (1x)
Biol. Unit 6:  B,D  (1x)
Biol. Unit 7:  E,G  (1x)
Biol. Unit 8:  F,H  (1x)
Biol. Unit 9:  I,K  (1x)
Biol. Unit 10:  J,L  (1x)
Biol. Unit 11:  M,O  (1x)
Biol. Unit 12:  N,P  (1x)
Keywords :  Oxidoreductase, Heme-Dependent Peroxidase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  K. F. Geoghegan, A. H. Varghese, X. Feng, A. J. Bessire, J. J. Conboy, R. B. Ruggeri, K. Ahn, S. N. Spath, S. V. Filippov, S. J. Conrad, P. A. Carpino, C. R. Guimaraes, F. F. Vajdos
Deconstruction Of Activity-Dependent Covalent Modification Of Heme In Human Neutrophil Myeloperoxidase By Multistage Mass Spectrometry (Ms(4)).
Biochemistry V. 51 2065 2012
PubMed-ID: 22352991  |  Reference-DOI: 10.1021/BI201872J

(-) Compounds

Molecule 1 - MYELOPEROXIDASE LIGHT CHAIN
    ChainsA, B, E, F, I, J, M, N
    EC Number1.11.2.2
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    Other DetailsBLOOD
 
Molecule 2 - MYELOPEROXIDASE HEAVY CHAIN
    ChainsC, D, G, H, K, L, O, P
    EC Number1.11.2.2
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606

 Structural Features

(-) Chains, Units

  12345678910111213141516
Asymmetric Unit ABCDEFGHIJKLMNOP
Biological Unit 1 (1x)ABCD            
Biological Unit 2 (1x)    EFGH        
Biological Unit 3 (1x)        IJKL    
Biological Unit 4 (1x)            MNOP
Biological Unit 5 (1x)A C             
Biological Unit 6 (1x) B D            
Biological Unit 7 (1x)    E G         
Biological Unit 8 (1x)     F H        
Biological Unit 9 (1x)        I K     
Biological Unit 10 (1x)         J L    
Biological Unit 11 (1x)            M O 
Biological Unit 12 (1x)             N P

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (9, 108)

Asymmetric Unit (9, 108)
No.NameCountTypeFull Name
10KY8Ligand/Ion3-[(2R)-2-ETHOXYPROPYL]-2-THIOXO-1,2,3,9-TETRAHYDRO-6H-PURIN-6-ONE
2BMA9Ligand/IonBETA-D-MANNOSE
3CA8Ligand/IonCALCIUM ION
4CL8Ligand/IonCHLORIDE ION
5CSO8Mod. Amino AcidS-HYDROXYCYSTEINE
6FUC8Ligand/IonALPHA-L-FUCOSE
7HEM8Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
8MAN18Ligand/IonALPHA-D-MANNOSE
9NAG33Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 1 (7, 22)
No.NameCountTypeFull Name
10KY2Ligand/Ion3-[(2R)-2-ETHOXYPROPYL]-2-THIOXO-1,2,3,9-TETRAHYDRO-6H-PURIN-6-ONE
2BMA2Ligand/IonBETA-D-MANNOSE
3CA-1Ligand/IonCALCIUM ION
4CL-1Ligand/IonCHLORIDE ION
5CSO2Mod. Amino AcidS-HYDROXYCYSTEINE
6FUC2Ligand/IonALPHA-L-FUCOSE
7HEM2Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
8MAN4Ligand/IonALPHA-D-MANNOSE
9NAG8Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 2 (7, 22)
No.NameCountTypeFull Name
10KY2Ligand/Ion3-[(2R)-2-ETHOXYPROPYL]-2-THIOXO-1,2,3,9-TETRAHYDRO-6H-PURIN-6-ONE
2BMA2Ligand/IonBETA-D-MANNOSE
3CA-1Ligand/IonCALCIUM ION
4CL-1Ligand/IonCHLORIDE ION
5CSO2Mod. Amino AcidS-HYDROXYCYSTEINE
6FUC2Ligand/IonALPHA-L-FUCOSE
7HEM2Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
8MAN4Ligand/IonALPHA-D-MANNOSE
9NAG8Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 3 (7, 22)
No.NameCountTypeFull Name
10KY2Ligand/Ion3-[(2R)-2-ETHOXYPROPYL]-2-THIOXO-1,2,3,9-TETRAHYDRO-6H-PURIN-6-ONE
2BMA2Ligand/IonBETA-D-MANNOSE
3CA-1Ligand/IonCALCIUM ION
4CL-1Ligand/IonCHLORIDE ION
5CSO2Mod. Amino AcidS-HYDROXYCYSTEINE
6FUC2Ligand/IonALPHA-L-FUCOSE
7HEM2Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
8MAN4Ligand/IonALPHA-D-MANNOSE
9NAG8Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 4 (7, 26)
No.NameCountTypeFull Name
10KY2Ligand/Ion3-[(2R)-2-ETHOXYPROPYL]-2-THIOXO-1,2,3,9-TETRAHYDRO-6H-PURIN-6-ONE
2BMA3Ligand/IonBETA-D-MANNOSE
3CA-1Ligand/IonCALCIUM ION
4CL-1Ligand/IonCHLORIDE ION
5CSO2Mod. Amino AcidS-HYDROXYCYSTEINE
6FUC2Ligand/IonALPHA-L-FUCOSE
7HEM2Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
8MAN6Ligand/IonALPHA-D-MANNOSE
9NAG9Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 5 (7, 11)
No.NameCountTypeFull Name
10KY1Ligand/Ion3-[(2R)-2-ETHOXYPROPYL]-2-THIOXO-1,2,3,9-TETRAHYDRO-6H-PURIN-6-ONE
2BMA1Ligand/IonBETA-D-MANNOSE
3CA-1Ligand/IonCALCIUM ION
4CL-1Ligand/IonCHLORIDE ION
5CSO1Mod. Amino AcidS-HYDROXYCYSTEINE
6FUC1Ligand/IonALPHA-L-FUCOSE
7HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
8MAN2Ligand/IonALPHA-D-MANNOSE
9NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 6 (7, 11)
No.NameCountTypeFull Name
10KY1Ligand/Ion3-[(2R)-2-ETHOXYPROPYL]-2-THIOXO-1,2,3,9-TETRAHYDRO-6H-PURIN-6-ONE
2BMA1Ligand/IonBETA-D-MANNOSE
3CA-1Ligand/IonCALCIUM ION
4CL-1Ligand/IonCHLORIDE ION
5CSO1Mod. Amino AcidS-HYDROXYCYSTEINE
6FUC1Ligand/IonALPHA-L-FUCOSE
7HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
8MAN2Ligand/IonALPHA-D-MANNOSE
9NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 7 (7, 11)
No.NameCountTypeFull Name
10KY1Ligand/Ion3-[(2R)-2-ETHOXYPROPYL]-2-THIOXO-1,2,3,9-TETRAHYDRO-6H-PURIN-6-ONE
2BMA1Ligand/IonBETA-D-MANNOSE
3CA-1Ligand/IonCALCIUM ION
4CL-1Ligand/IonCHLORIDE ION
5CSO1Mod. Amino AcidS-HYDROXYCYSTEINE
6FUC1Ligand/IonALPHA-L-FUCOSE
7HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
8MAN2Ligand/IonALPHA-D-MANNOSE
9NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 8 (7, 11)
No.NameCountTypeFull Name
10KY1Ligand/Ion3-[(2R)-2-ETHOXYPROPYL]-2-THIOXO-1,2,3,9-TETRAHYDRO-6H-PURIN-6-ONE
2BMA1Ligand/IonBETA-D-MANNOSE
3CA-1Ligand/IonCALCIUM ION
4CL-1Ligand/IonCHLORIDE ION
5CSO1Mod. Amino AcidS-HYDROXYCYSTEINE
6FUC1Ligand/IonALPHA-L-FUCOSE
7HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
8MAN2Ligand/IonALPHA-D-MANNOSE
9NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 9 (7, 11)
No.NameCountTypeFull Name
10KY1Ligand/Ion3-[(2R)-2-ETHOXYPROPYL]-2-THIOXO-1,2,3,9-TETRAHYDRO-6H-PURIN-6-ONE
2BMA1Ligand/IonBETA-D-MANNOSE
3CA-1Ligand/IonCALCIUM ION
4CL-1Ligand/IonCHLORIDE ION
5CSO1Mod. Amino AcidS-HYDROXYCYSTEINE
6FUC1Ligand/IonALPHA-L-FUCOSE
7HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
8MAN2Ligand/IonALPHA-D-MANNOSE
9NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 10 (7, 11)
No.NameCountTypeFull Name
10KY1Ligand/Ion3-[(2R)-2-ETHOXYPROPYL]-2-THIOXO-1,2,3,9-TETRAHYDRO-6H-PURIN-6-ONE
2BMA1Ligand/IonBETA-D-MANNOSE
3CA-1Ligand/IonCALCIUM ION
4CL-1Ligand/IonCHLORIDE ION
5CSO1Mod. Amino AcidS-HYDROXYCYSTEINE
6FUC1Ligand/IonALPHA-L-FUCOSE
7HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
8MAN2Ligand/IonALPHA-D-MANNOSE
9NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 11 (7, 11)
No.NameCountTypeFull Name
10KY1Ligand/Ion3-[(2R)-2-ETHOXYPROPYL]-2-THIOXO-1,2,3,9-TETRAHYDRO-6H-PURIN-6-ONE
2BMA1Ligand/IonBETA-D-MANNOSE
3CA-1Ligand/IonCALCIUM ION
4CL-1Ligand/IonCHLORIDE ION
5CSO1Mod. Amino AcidS-HYDROXYCYSTEINE
6FUC1Ligand/IonALPHA-L-FUCOSE
7HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
8MAN2Ligand/IonALPHA-D-MANNOSE
9NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 12 (7, 15)
No.NameCountTypeFull Name
10KY1Ligand/Ion3-[(2R)-2-ETHOXYPROPYL]-2-THIOXO-1,2,3,9-TETRAHYDRO-6H-PURIN-6-ONE
2BMA2Ligand/IonBETA-D-MANNOSE
3CA-1Ligand/IonCALCIUM ION
4CL-1Ligand/IonCHLORIDE ION
5CSO1Mod. Amino AcidS-HYDROXYCYSTEINE
6FUC1Ligand/IonALPHA-L-FUCOSE
7HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
8MAN4Ligand/IonALPHA-D-MANNOSE
9NAG5Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (100, 100)

Asymmetric Unit (100, 100)
No.NameEvidenceResiduesDescription
001AC1SOFTWAREARG A:31 , TRP A:32 , HOH A:1704 , VAL C:327BINDING SITE FOR RESIDUE CL A 1601
002AC2SOFTWAREGLU A:102 , PRO A:103 , HOH A:1706 , HOH A:1741 , PHE C:147 , ARG C:239 , HEM C:601 , HOH C:702 , HOH C:835BINDING SITE FOR RESIDUE 0KY A 1602
003AC3SOFTWAREMET A:87 , GLY A:90 , GLN A:91 , ASP A:94 , ASP A:98 , PHE A:99 , THR A:100 , 0KY A:1602 , HOH A:1701 , ARG C:239 , GLU C:242 , MET C:243 , THR C:329 , PHE C:332 , ARG C:333 , GLY C:335 , HIS C:336 , LEU C:417 , ARG C:424 , HOH C:702 , HOH C:1035BINDING SITE FOR RESIDUE HEM C 601
004AC4SOFTWAREASN C:317 , VAL C:320 , NAG C:603 , FUC C:607 , HOH C:836 , HOH C:853 , HOH D:814BINDING SITE FOR RESIDUE NAG C 602
005AC5SOFTWARELEU B:33 , SER C:319 , NAG C:602 , BMA C:604 , HOH C:730 , HOH C:769 , HOH C:819 , HOH C:952 , PHE D:439 , GLY D:441 , HOH D:814BINDING SITE FOR RESIDUE NAG C 603
006AC6SOFTWARENAG C:603 , MAN C:605 , MAN C:606 , HOH C:775 , PHE D:439 , HOH D:817BINDING SITE FOR RESIDUE BMA C 604
007AC7SOFTWAREBMA C:604 , HOH C:756 , LYS D:308BINDING SITE FOR RESIDUE MAN C 605
008AC8SOFTWAREBMA C:604 , HOH C:763 , HOH C:817 , PHE D:439 , LYS D:505 , FUC D:606BINDING SITE FOR RESIDUE MAN C 606
009AC9SOFTWAREARG C:504 , NAG C:602 , HOH C:1007 , MAN D:605 , HOH D:915BINDING SITE FOR RESIDUE FUC C 607
010BC1SOFTWAREASN C:189 , ASN C:192 , ALA C:198 , VAL C:199 , GLN C:201 , HOH C:825 , HOH C:1016BINDING SITE FOR RESIDUE NAG C 608
011BC2SOFTWAREASN C:225 , TRP C:369BINDING SITE FOR RESIDUE NAG C 609
012BC3SOFTWAREASP A:96 , THR C:168 , PHE C:170 , ASP C:172 , SER C:174BINDING SITE FOR RESIDUE CA C 610
013BC4SOFTWAREARG B:31 , TRP B:32 , HOH B:305 , ASN D:326 , VAL D:327 , TRP D:436BINDING SITE FOR RESIDUE CL B 201
014BC5SOFTWAREMET B:87 , GLY B:90 , GLN B:91 , ASP B:94 , ASP B:98 , PHE B:99 , THR B:100 , 0KY B:203 , HOH B:354 , HOH B:363 , ARG D:239 , GLU D:242 , MET D:243 , THR D:329 , PHE D:332 , ARG D:333 , GLY D:335 , HIS D:336 , ILE D:339 , PHE D:407 , LEU D:417 , ARG D:424BINDING SITE FOR RESIDUE HEM B 202
015BC6SOFTWAREGLU B:102 , HEM B:202 , HOH B:366 , ARG D:239 , GLU D:242 , PHE D:407BINDING SITE FOR RESIDUE 0KY B 203
016BC7SOFTWAREHOH C:721 , ASN D:317 , NAG D:602 , FUC D:606 , HOH D:716 , HOH D:819BINDING SITE FOR RESIDUE NAG D 601
017BC8SOFTWARELEU A:33 , ARG C:438 , PHE C:439 , GLY C:441 , HOH C:721 , HOH C:948 , SER D:319 , NAG D:601 , BMA D:603 , FUC D:606 , HOH D:835 , HOH D:878 , HOH D:914BINDING SITE FOR RESIDUE NAG D 602
018BC9SOFTWAREPHE C:439 , HOH C:848 , NAG D:602 , MAN D:604 , MAN D:605BINDING SITE FOR RESIDUE BMA D 603
019CC1SOFTWARELYS C:308 , BMA D:603BINDING SITE FOR RESIDUE MAN D 604
020CC2SOFTWAREPHE C:439 , LYS C:505 , FUC C:607 , HOH C:904 , HOH C:1007 , BMA D:603 , HOH D:915 , HOH D:939BINDING SITE FOR RESIDUE MAN D 605
021CC3SOFTWAREMAN C:606 , NAG D:601 , NAG D:602BINDING SITE FOR RESIDUE FUC D 606
022CC4SOFTWAREASN D:189 , ASN D:192 , ALA D:198 , VAL D:199 , GLN D:201 , HOH D:719 , HOH D:764BINDING SITE FOR RESIDUE NAG D 607
023CC5SOFTWAREASN D:225 , TRP D:369 , LEU D:373 , HOH D:950BINDING SITE FOR RESIDUE NAG D 608
024CC6SOFTWAREASP B:96 , THR D:168 , PHE D:170 , ASP D:172 , SER D:174BINDING SITE FOR RESIDUE CA D 609
025CC7SOFTWARETRP E:32 , ASN G:326 , VAL G:327 , TRP G:436BINDING SITE FOR RESIDUE CL E 1601
026CC8SOFTWAREMET E:87 , GLY E:90 , GLN E:91 , ASP E:94 , ASP E:98 , PHE E:99 , THR E:100 , HOH E:1703 , HOH E:1726 , HOH E:1752 , ARG G:239 , GLU G:242 , MET G:243 , THR G:329 , PHE G:332 , ARG G:333 , GLY G:335 , HIS G:336 , ILE G:339 , LEU G:417 , ARG G:424 , 0KY G:610BINDING SITE FOR RESIDUE HEM E 1602
027CC9SOFTWAREASN G:317 , VAL G:320 , NAG G:602 , FUC G:606 , HOH G:896 , ARG H:438 , HOH H:1772BINDING SITE FOR RESIDUE NAG G 601
028DC1SOFTWARELEU F:33 , NAG G:601 , BMA G:603 , HOH G:804 , HOH G:921 , ARG H:438 , PHE H:439 , GLY H:441 , HOH H:1772BINDING SITE FOR RESIDUE NAG G 602
029DC2SOFTWARENAG G:602 , MAN G:604 , MAN G:605 , HOH G:796 , HOH G:849 , HOH G:862 , PHE H:439BINDING SITE FOR RESIDUE BMA G 603
030DC3SOFTWAREBMA G:603 , HOH G:777 , LYS H:308BINDING SITE FOR RESIDUE MAN G 604
031DC4SOFTWARETRP F:32 , BMA G:603 , PHE H:439 , LYS H:505 , FUC H:606 , HOH H:1828BINDING SITE FOR RESIDUE MAN G 605
032DC5SOFTWARENAG G:601 , MAN H:605BINDING SITE FOR RESIDUE FUC G 606
033DC6SOFTWAREASN G:189 , ASN G:192 , LEU G:196 , ALA G:198 , VAL G:199 , GLN G:201 , HOH G:813 , HOH G:905 , HOH G:940BINDING SITE FOR RESIDUE NAG G 607
034DC7SOFTWAREASN G:225 , SER G:227 , ALA G:228 , TRP G:369 , HOH G:891BINDING SITE FOR RESIDUE NAG G 608
035DC8SOFTWAREASP E:96 , THR G:168 , PHE G:170 , ASP G:172 , SER G:174BINDING SITE FOR RESIDUE CA G 609
036DC9SOFTWAREGLU E:102 , HEM E:1602 , ARG G:239 , GLU G:242 , PHE G:407 , HOH G:709BINDING SITE FOR RESIDUE 0KY G 610
037EC1SOFTWARETRP F:32 , ASN H:326 , VAL H:327BINDING SITE FOR RESIDUE CL F 201
038EC2SOFTWAREMET F:87 , GLY F:90 , GLN F:91 , ASP F:94 , ASP F:98 , PHE F:99 , THR F:100 , HOH F:307 , HOH F:362 , ARG H:239 , GLU H:242 , MET H:243 , THR H:329 , PHE H:332 , ARG H:333 , GLY H:335 , HIS H:336 , PHE H:407 , LEU H:417 , LEU H:420 , ARG H:424 , 0KY H:610 , HOH H:1873BINDING SITE FOR RESIDUE HEM F 202
039EC3SOFTWAREHOH G:848 , ASN H:317 , VAL H:320 , NAG H:602 , FUC H:606 , HOH H:1738 , HOH H:1870BINDING SITE FOR RESIDUE NAG H 601
040EC4SOFTWAREARG G:438 , PHE G:439 , GLY G:441 , HOH G:847 , HOH G:848 , SER H:319 , NAG H:601 , BMA H:603 , HOH H:1771BINDING SITE FOR RESIDUE NAG H 602
041EC5SOFTWAREPHE G:439 , HOH G:923 , NAG H:602 , MAN H:604 , MAN H:605 , HOH H:1863BINDING SITE FOR RESIDUE BMA H 603
042EC6SOFTWARELYS G:308 , BMA H:603 , HOH H:1806BINDING SITE FOR RESIDUE MAN H 604
043EC7SOFTWAREPHE G:439 , LYS G:505 , FUC G:606 , BMA H:603BINDING SITE FOR RESIDUE MAN H 605
044EC8SOFTWAREMAN G:605 , VAL H:320 , ARG H:504 , NAG H:601BINDING SITE FOR RESIDUE FUC H 606
045EC9SOFTWAREASN H:189 , ASN H:192 , ALA H:198 , VAL H:199 , GLN H:201BINDING SITE FOR RESIDUE NAG H 607
046FC1SOFTWAREASN H:225 , SER H:227 , TRP H:369 , HOH H:1896BINDING SITE FOR RESIDUE NAG H 608
047FC2SOFTWAREASP F:96 , THR H:168 , PHE H:170 , ASP H:172 , SER H:174BINDING SITE FOR RESIDUE CA H 609
048FC3SOFTWAREHEM F:202 , ARG H:239 , GLU H:242 , PHE H:407 , HOH H:1861BINDING SITE FOR RESIDUE 0KY H 610
049FC4SOFTWAREARG I:31 , TRP I:32 , ASN K:326 , VAL K:327 , TRP K:436BINDING SITE FOR RESIDUE CL I 1601
050FC5SOFTWAREMET I:87 , GLY I:90 , GLN I:91 , ASP I:94 , ASP I:98 , PHE I:99 , THR I:100 , 0KY I:1603 , HOH I:1722 , HOH I:1761 , HOH I:1770 , ARG K:239 , GLU K:242 , MET K:243 , THR K:329 , PHE K:332 , ARG K:333 , GLY K:335 , HIS K:336 , ILE K:339 , LEU K:417 , ARG K:424BINDING SITE FOR RESIDUE HEM I 1602
051FC6SOFTWAREGLU I:102 , PRO I:103 , HEM I:1602 , HOH I:1701 , HOH I:1764 , HOH I:1773 , ARG K:239 , GLU K:242 , PHE K:407BINDING SITE FOR RESIDUE 0KY I 1603
052FC7SOFTWAREASN K:317 , VAL K:320 , NAG K:602 , FUC K:606 , HOH K:740 , HOH K:742 , HOH K:797 , HOH K:807BINDING SITE FOR RESIDUE NAG K 601
053FC8SOFTWARELEU J:33 , SER K:319 , NAG K:601 , BMA K:603 , HOH K:742 , HOH K:744 , ARG L:438 , PHE L:439 , GLY L:441 , HOH L:725BINDING SITE FOR RESIDUE NAG K 602
054FC9SOFTWARENAG K:602 , MAN K:604 , MAN K:605 , PHE L:439 , HOH L:748BINDING SITE FOR RESIDUE BMA K 603
055GC1SOFTWAREBMA K:603 , HOH K:774 , HOH K:877 , LYS L:308BINDING SITE FOR RESIDUE MAN K 604
056GC2SOFTWAREBMA K:603 , HOH K:898 , HOH K:902 , PHE L:439 , LYS L:505 , FUC L:606BINDING SITE FOR RESIDUE MAN K 605
057GC3SOFTWAREARG K:504 , NAG K:601 , HOH K:872 , MAN L:605 , HOH L:933BINDING SITE FOR RESIDUE FUC K 606
058GC4SOFTWAREASN K:189 , ASN K:192 , LEU K:196 , ALA K:198 , VAL K:199 , GLN K:201 , HOH K:732BINDING SITE FOR RESIDUE NAG K 607
059GC5SOFTWAREASN K:225 , TRP K:369 , HOH K:843BINDING SITE FOR RESIDUE NAG K 608
060GC6SOFTWAREASP I:96 , THR K:168 , PHE K:170 , ASP K:172 , SER K:174BINDING SITE FOR RESIDUE CA K 609
061GC7SOFTWAREARG J:31 , TRP J:32 , ASN L:326 , VAL L:327 , TRP L:436BINDING SITE FOR RESIDUE CL J 201
062GC8SOFTWAREMET J:87 , GLY J:90 , GLN J:91 , ASP J:94 , ASP J:98 , PHE J:99 , THR J:100 , 0KY J:203 , HOH J:302 , HOH J:331 , HOH J:361 , ARG L:239 , GLU L:242 , MET L:243 , THR L:329 , PHE L:332 , ARG L:333 , GLY L:335 , HIS L:336 , LEU L:417 , ARG L:424BINDING SITE FOR RESIDUE HEM J 202
063GC9SOFTWAREGLU J:102 , HEM J:202 , HOH J:349 , ARG L:239 , GLU L:242 , PHE L:407BINDING SITE FOR RESIDUE 0KY J 203
064HC1SOFTWAREHOH K:833 , ASN L:317 , VAL L:320 , NAG L:602 , FUC L:606 , HOH L:792 , HOH L:852 , HOH L:854BINDING SITE FOR RESIDUE NAG L 601
065HC2SOFTWARELEU I:33 , ARG K:438 , PHE K:439 , GLY K:441 , HOH K:833 , SER L:319 , NAG L:601 , BMA L:603 , FUC L:606 , HOH L:701 , HOH L:816 , HOH L:835 , HOH L:870BINDING SITE FOR RESIDUE NAG L 602
066HC3SOFTWAREPHE K:439 , HOH K:734 , NAG L:602 , MAN L:604 , MAN L:605BINDING SITE FOR RESIDUE BMA L 603
067HC4SOFTWARELYS K:308 , BMA L:603 , HOH L:870BINDING SITE FOR RESIDUE MAN L 604
068HC5SOFTWAREPHE K:439 , LYS K:505 , FUC K:606 , HOH K:872 , BMA L:603 , HOH L:933BINDING SITE FOR RESIDUE MAN L 605
069HC6SOFTWAREMAN K:605 , HOH K:902 , ARG L:504 , NAG L:601 , NAG L:602BINDING SITE FOR RESIDUE FUC L 606
070HC7SOFTWAREASN L:189 , ASN L:192 , ALA L:198 , VAL L:199 , GLN L:201 , HOH L:711 , HOH L:759 , HOH L:945BINDING SITE FOR RESIDUE NAG L 607
071HC8SOFTWAREASN L:225 , SER L:227 , TRP L:369 , HOH L:948 , HOH L:950BINDING SITE FOR RESIDUE NAG L 608
072HC9SOFTWAREASP J:96 , THR L:168 , PHE L:170 , ASP L:172 , SER L:174BINDING SITE FOR RESIDUE CA L 609
073IC1SOFTWAREARG M:31 , TRP M:32 , HOH M:1709 , ASN O:326 , VAL O:327BINDING SITE FOR RESIDUE CL M 1601
074IC2SOFTWAREMET M:87 , GLY M:90 , GLN M:91 , ASP M:94 , ASP M:98 , PHE M:99 , THR M:100 , HOH M:1713 , HOH M:1747 , ARG O:239 , GLU O:242 , MET O:243 , THR O:329 , PHE O:332 , ARG O:333 , GLY O:335 , HIS O:336 , ILE O:339 , ARG O:424 , 0KY O:610BINDING SITE FOR RESIDUE HEM M 1602
075IC3SOFTWAREASN O:317 , VAL O:320 , NAG O:602 , FUC O:606 , ARG P:438 , HOH P:785BINDING SITE FOR RESIDUE NAG O 601
076IC4SOFTWARELEU N:33 , SER O:319 , NAG O:601 , BMA O:603 , HOH O:743 , HOH O:906 , ARG P:438 , PHE P:439BINDING SITE FOR RESIDUE NAG O 602
077IC5SOFTWARENAG O:602 , MAN O:604 , MAN O:605 , PHE P:439 , HOH P:848BINDING SITE FOR RESIDUE BMA O 603
078IC6SOFTWAREBMA O:603 , LYS P:308BINDING SITE FOR RESIDUE MAN O 604
079IC7SOFTWAREBMA O:603 , HOH O:905 , HOH O:916 , PHE P:439 , LYS P:505 , FUC P:607BINDING SITE FOR RESIDUE MAN O 605
080IC8SOFTWARENAG O:601 , MAN P:606BINDING SITE FOR RESIDUE FUC O 606
081IC9SOFTWAREASN O:189 , ASN O:192 , ALA O:198 , VAL O:199 , GLN O:201 , HOH O:805 , HOH O:833BINDING SITE FOR RESIDUE NAG O 607
082JC1SOFTWAREARG G:559 , ASN O:225BINDING SITE FOR RESIDUE NAG O 608
083JC2SOFTWAREASP M:96 , THR O:168 , PHE O:170 , ASP O:172 , SER O:174BINDING SITE FOR RESIDUE CA O 609
084JC3SOFTWAREHEM M:1602 , ARG O:239 , GLU O:242 , PHE O:366 , PHE O:407 , HOH O:886BINDING SITE FOR RESIDUE 0KY O 610
085JC4SOFTWAREARG N:31 , TRP N:32 , HOH N:332 , ASN P:326 , VAL P:327 , TRP P:436BINDING SITE FOR RESIDUE CL N 201
086JC5SOFTWAREMET N:87 , GLY N:90 , GLN N:91 , ASP N:94 , ASP N:98 , PHE N:99 , THR N:100 , HOH N:307 , HOH N:345 , ARG P:239 , GLU P:242 , MET P:243 , THR P:329 , PHE P:332 , ARG P:333 , GLY P:335 , HIS P:336 , LEU P:417 , ARG P:424 , 0KY P:614BINDING SITE FOR RESIDUE HEM N 202
087JC6SOFTWAREASP N:96 , THR P:168 , PHE P:170 , ASP P:172 , SER P:174BINDING SITE FOR RESIDUE CA P 601
088JC7SOFTWAREHOH O:736 , ASN P:317 , VAL P:320 , NAG P:603 , FUC P:607 , HOH P:759BINDING SITE FOR RESIDUE NAG P 602
089JC8SOFTWARELEU M:33 , PHE O:439 , GLY O:441 , HOH O:736 , SER P:319 , NAG P:602 , BMA P:604 , FUC P:607 , HOH P:701 , HOH P:845 , HOH P:855BINDING SITE FOR RESIDUE NAG P 603
090JC9SOFTWAREPHE O:439 , HOH O:867 , NAG P:603 , MAN P:605 , MAN P:606 , HOH P:861BINDING SITE FOR RESIDUE BMA P 604
091KC1SOFTWARELYS O:308 , BMA P:604 , HOH P:702BINDING SITE FOR RESIDUE MAN P 605
092KC2SOFTWARETRP M:32 , PHE O:439 , LYS O:505 , FUC O:606 , BMA P:604 , HOH P:907BINDING SITE FOR RESIDUE MAN P 606
093KC3SOFTWAREMAN O:605 , HOH O:905 , NAG P:602 , NAG P:603BINDING SITE FOR RESIDUE FUC P 607
094KC4SOFTWAREASN P:225 , ALA P:228 , TRP P:369 , HOH P:797BINDING SITE FOR RESIDUE NAG P 608
095KC5SOFTWAREASN P:189 , ASN P:192 , ALA P:198 , VAL P:199 , GLN P:201 , NAG P:610 , HOH P:733 , HOH P:781BINDING SITE FOR RESIDUE NAG P 609
096KC6SOFTWARELEU C:194 , HOH C:869 , NAG P:609 , BMA P:611 , HOH P:836 , HOH P:862 , HOH P:874 , HOH P:886BINDING SITE FOR RESIDUE NAG P 610
097KC7SOFTWAREHOH C:869 , NAG P:610 , MAN P:612 , MAN P:613 , HOH P:862 , HOH P:874BINDING SITE FOR RESIDUE BMA P 611
098KC8SOFTWAREARG P:202 , GLN P:204 , BMA P:611 , HOH P:736 , HOH P:819 , HOH P:844BINDING SITE FOR RESIDUE MAN P 612
099KC9SOFTWARESER C:191 , BMA P:611BINDING SITE FOR RESIDUE MAN P 613
100LC1SOFTWAREHEM N:202 , ARG P:239 , GLU P:242 , PHE P:407 , HOH P:764 , HOH P:897BINDING SITE FOR RESIDUE 0KY P 614

(-) SS Bonds  (52, 52)

Asymmetric Unit
No.Residues
1A:1 -A:14
2B:1 -B:14
3C:115 -C:125
4C:119 -C:143
5C:153 -D:153
6C:221 -C:232
7C:440 -C:497
8C:538 -C:564
9D:115 -D:125
10D:119 -D:143
11D:221 -D:232
12D:440 -D:497
13D:538 -D:564
14E:1 -E:14
15F:1 -F:14
16G:115 -G:125
17G:119 -G:143
18G:153 -H:153
19G:221 -G:232
20G:440 -G:497
21G:538 -G:564
22H:115 -H:125
23H:119 -H:143
24H:221 -H:232
25H:440 -H:497
26H:538 -H:564
27I:1 -I:14
28J:1 -J:14
29K:115 -K:125
30K:119 -K:143
31K:153 -L:153
32K:221 -K:232
33K:440 -K:497
34K:538 -K:564
35L:115 -L:125
36L:119 -L:143
37L:221 -L:232
38L:440 -L:497
39L:538 -L:564
40M:1 -M:14
41N:1 -N:14
42O:115 -O:125
43O:119 -O:143
44O:153 -P:153
45O:221 -O:232
46O:440 -O:497
47O:538 -O:564
48P:115 -P:125
49P:119 -P:143
50P:221 -P:232
51P:440 -P:497
52P:538 -P:564

(-) Cis Peptide Bonds  (32, 32)

Asymmetric Unit
No.Residues
1Pro C:123 -Pro C:124
2Glu C:354 -Pro C:355
3Asn C:549 -Asn C:550
4Tyr C:557 -Pro C:558
5Pro D:123 -Pro D:124
6Glu D:354 -Pro D:355
7Asn D:549 -Asn D:550
8Tyr D:557 -Pro D:558
9Pro G:123 -Pro G:124
10Glu G:354 -Pro G:355
11Asn G:549 -Asn G:550
12Tyr G:557 -Pro G:558
13Pro H:123 -Pro H:124
14Glu H:354 -Pro H:355
15Asn H:549 -Asn H:550
16Tyr H:557 -Pro H:558
17Pro K:123 -Pro K:124
18Glu K:354 -Pro K:355
19Asn K:549 -Asn K:550
20Tyr K:557 -Pro K:558
21Pro L:123 -Pro L:124
22Glu L:354 -Pro L:355
23Asn L:549 -Asn L:550
24Tyr L:557 -Pro L:558
25Pro O:123 -Pro O:124
26Glu O:354 -Pro O:355
27Asn O:549 -Asn O:550
28Tyr O:557 -Pro O:558
29Pro P:123 -Pro P:124
30Glu P:354 -Pro P:355
31Asn P:549 -Asn P:550
32Tyr P:557 -Pro P:558

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (8, 64)

Asymmetric Unit (8, 64)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_015377Y173CPERM_HUMANDisease (MPOD)78950939A/B/E/F/I/J/M/NY7C
2UniProtVAR_015378M251TPERM_HUMANDisease (MPOD)56378716A/B/E/F/I/J/M/NM85T
3UniProtVAR_036517R447QPERM_HUMANUnclassified762688992C/D/G/H/K/L/O/PR281Q
4CancerSNPVAR_PERM_HUMAN_CCDS11604_1_01 *R447QPERM_HUMANDisease (Colorectal cancer)  ---C/D/G/H/K/L/O/PR281Q
5UniProtVAR_015379R569WPERM_HUMANDisease (MPOD)119468010C/D/G/H/K/L/O/PR403W
6UniProtVAR_023996R604CPERM_HUMANPolymorphism35670089C/D/G/H/K/L/O/PR438C
7UniProtVAR_023997E683QPERM_HUMANPolymorphism35702888C/D/G/H/K/L/O/PE517Q
8UniProtVAR_012066I717VPERM_HUMANPolymorphism2759C/D/G/H/K/L/O/PI551V
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (8, 16)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_015377Y173CPERM_HUMANDisease (MPOD)78950939A/BY7C
2UniProtVAR_015378M251TPERM_HUMANDisease (MPOD)56378716A/BM85T
3UniProtVAR_036517R447QPERM_HUMANUnclassified762688992C/DR281Q
4CancerSNPVAR_PERM_HUMAN_CCDS11604_1_01 *R447QPERM_HUMANDisease (Colorectal cancer)  ---C/DR281Q
5UniProtVAR_015379R569WPERM_HUMANDisease (MPOD)119468010C/DR403W
6UniProtVAR_023996R604CPERM_HUMANPolymorphism35670089C/DR438C
7UniProtVAR_023997E683QPERM_HUMANPolymorphism35702888C/DE517Q
8UniProtVAR_012066I717VPERM_HUMANPolymorphism2759C/DI551V
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (8, 16)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_015377Y173CPERM_HUMANDisease (MPOD)78950939E/FY7C
2UniProtVAR_015378M251TPERM_HUMANDisease (MPOD)56378716E/FM85T
3UniProtVAR_036517R447QPERM_HUMANUnclassified762688992G/HR281Q
4CancerSNPVAR_PERM_HUMAN_CCDS11604_1_01 *R447QPERM_HUMANDisease (Colorectal cancer)  ---G/HR281Q
5UniProtVAR_015379R569WPERM_HUMANDisease (MPOD)119468010G/HR403W
6UniProtVAR_023996R604CPERM_HUMANPolymorphism35670089G/HR438C
7UniProtVAR_023997E683QPERM_HUMANPolymorphism35702888G/HE517Q
8UniProtVAR_012066I717VPERM_HUMANPolymorphism2759G/HI551V
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 3 (8, 16)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_015377Y173CPERM_HUMANDisease (MPOD)78950939I/JY7C
2UniProtVAR_015378M251TPERM_HUMANDisease (MPOD)56378716I/JM85T
3UniProtVAR_036517R447QPERM_HUMANUnclassified762688992K/LR281Q
4CancerSNPVAR_PERM_HUMAN_CCDS11604_1_01 *R447QPERM_HUMANDisease (Colorectal cancer)  ---K/LR281Q
5UniProtVAR_015379R569WPERM_HUMANDisease (MPOD)119468010K/LR403W
6UniProtVAR_023996R604CPERM_HUMANPolymorphism35670089K/LR438C
7UniProtVAR_023997E683QPERM_HUMANPolymorphism35702888K/LE517Q
8UniProtVAR_012066I717VPERM_HUMANPolymorphism2759K/LI551V
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 4 (8, 16)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_015377Y173CPERM_HUMANDisease (MPOD)78950939M/NY7C
2UniProtVAR_015378M251TPERM_HUMANDisease (MPOD)56378716M/NM85T
3UniProtVAR_036517R447QPERM_HUMANUnclassified762688992O/PR281Q
4CancerSNPVAR_PERM_HUMAN_CCDS11604_1_01 *R447QPERM_HUMANDisease (Colorectal cancer)  ---O/PR281Q
5UniProtVAR_015379R569WPERM_HUMANDisease (MPOD)119468010O/PR403W
6UniProtVAR_023996R604CPERM_HUMANPolymorphism35670089O/PR438C
7UniProtVAR_023997E683QPERM_HUMANPolymorphism35702888O/PE517Q
8UniProtVAR_012066I717VPERM_HUMANPolymorphism2759O/PI551V
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 5 (8, 8)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_015377Y173CPERM_HUMANDisease (MPOD)78950939AY7C
2UniProtVAR_015378M251TPERM_HUMANDisease (MPOD)56378716AM85T
3UniProtVAR_036517R447QPERM_HUMANUnclassified762688992CR281Q
4CancerSNPVAR_PERM_HUMAN_CCDS11604_1_01 *R447QPERM_HUMANDisease (Colorectal cancer)  ---CR281Q
5UniProtVAR_015379R569WPERM_HUMANDisease (MPOD)119468010CR403W
6UniProtVAR_023996R604CPERM_HUMANPolymorphism35670089CR438C
7UniProtVAR_023997E683QPERM_HUMANPolymorphism35702888CE517Q
8UniProtVAR_012066I717VPERM_HUMANPolymorphism2759CI551V
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 6 (8, 8)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_015377Y173CPERM_HUMANDisease (MPOD)78950939BY7C
2UniProtVAR_015378M251TPERM_HUMANDisease (MPOD)56378716BM85T
3UniProtVAR_036517R447QPERM_HUMANUnclassified762688992DR281Q
4CancerSNPVAR_PERM_HUMAN_CCDS11604_1_01 *R447QPERM_HUMANDisease (Colorectal cancer)  ---DR281Q
5UniProtVAR_015379R569WPERM_HUMANDisease (MPOD)119468010DR403W
6UniProtVAR_023996R604CPERM_HUMANPolymorphism35670089DR438C
7UniProtVAR_023997E683QPERM_HUMANPolymorphism35702888DE517Q
8UniProtVAR_012066I717VPERM_HUMANPolymorphism2759DI551V
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 7 (8, 8)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_015377Y173CPERM_HUMANDisease (MPOD)78950939EY7C
2UniProtVAR_015378M251TPERM_HUMANDisease (MPOD)56378716EM85T
3UniProtVAR_036517R447QPERM_HUMANUnclassified762688992GR281Q
4CancerSNPVAR_PERM_HUMAN_CCDS11604_1_01 *R447QPERM_HUMANDisease (Colorectal cancer)  ---GR281Q
5UniProtVAR_015379R569WPERM_HUMANDisease (MPOD)119468010GR403W
6UniProtVAR_023996R604CPERM_HUMANPolymorphism35670089GR438C
7UniProtVAR_023997E683QPERM_HUMANPolymorphism35702888GE517Q
8UniProtVAR_012066I717VPERM_HUMANPolymorphism2759GI551V
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 8 (8, 8)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_015377Y173CPERM_HUMANDisease (MPOD)78950939FY7C
2UniProtVAR_015378M251TPERM_HUMANDisease (MPOD)56378716FM85T
3UniProtVAR_036517R447QPERM_HUMANUnclassified762688992HR281Q
4CancerSNPVAR_PERM_HUMAN_CCDS11604_1_01 *R447QPERM_HUMANDisease (Colorectal cancer)  ---HR281Q
5UniProtVAR_015379R569WPERM_HUMANDisease (MPOD)119468010HR403W
6UniProtVAR_023996R604CPERM_HUMANPolymorphism35670089HR438C
7UniProtVAR_023997E683QPERM_HUMANPolymorphism35702888HE517Q
8UniProtVAR_012066I717VPERM_HUMANPolymorphism2759HI551V
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 9 (8, 8)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_015377Y173CPERM_HUMANDisease (MPOD)78950939IY7C
2UniProtVAR_015378M251TPERM_HUMANDisease (MPOD)56378716IM85T
3UniProtVAR_036517R447QPERM_HUMANUnclassified762688992KR281Q
4CancerSNPVAR_PERM_HUMAN_CCDS11604_1_01 *R447QPERM_HUMANDisease (Colorectal cancer)  ---KR281Q
5UniProtVAR_015379R569WPERM_HUMANDisease (MPOD)119468010KR403W
6UniProtVAR_023996R604CPERM_HUMANPolymorphism35670089KR438C
7UniProtVAR_023997E683QPERM_HUMANPolymorphism35702888KE517Q
8UniProtVAR_012066I717VPERM_HUMANPolymorphism2759KI551V
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 10 (8, 8)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_015377Y173CPERM_HUMANDisease (MPOD)78950939JY7C
2UniProtVAR_015378M251TPERM_HUMANDisease (MPOD)56378716JM85T
3UniProtVAR_036517R447QPERM_HUMANUnclassified762688992LR281Q
4CancerSNPVAR_PERM_HUMAN_CCDS11604_1_01 *R447QPERM_HUMANDisease (Colorectal cancer)  ---LR281Q
5UniProtVAR_015379R569WPERM_HUMANDisease (MPOD)119468010LR403W
6UniProtVAR_023996R604CPERM_HUMANPolymorphism35670089LR438C
7UniProtVAR_023997E683QPERM_HUMANPolymorphism35702888LE517Q
8UniProtVAR_012066I717VPERM_HUMANPolymorphism2759LI551V
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 11 (8, 8)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_015377Y173CPERM_HUMANDisease (MPOD)78950939MY7C
2UniProtVAR_015378M251TPERM_HUMANDisease (MPOD)56378716MM85T
3UniProtVAR_036517R447QPERM_HUMANUnclassified762688992OR281Q
4CancerSNPVAR_PERM_HUMAN_CCDS11604_1_01 *R447QPERM_HUMANDisease (Colorectal cancer)  ---OR281Q
5UniProtVAR_015379R569WPERM_HUMANDisease (MPOD)119468010OR403W
6UniProtVAR_023996R604CPERM_HUMANPolymorphism35670089OR438C
7UniProtVAR_023997E683QPERM_HUMANPolymorphism35702888OE517Q
8UniProtVAR_012066I717VPERM_HUMANPolymorphism2759OI551V
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 12 (8, 8)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_015377Y173CPERM_HUMANDisease (MPOD)78950939NY7C
2UniProtVAR_015378M251TPERM_HUMANDisease (MPOD)56378716NM85T
3UniProtVAR_036517R447QPERM_HUMANUnclassified762688992PR281Q
4CancerSNPVAR_PERM_HUMAN_CCDS11604_1_01 *R447QPERM_HUMANDisease (Colorectal cancer)  ---PR281Q
5UniProtVAR_015379R569WPERM_HUMANDisease (MPOD)119468010PR403W
6UniProtVAR_023996R604CPERM_HUMANPolymorphism35670089PR438C
7UniProtVAR_023997E683QPERM_HUMANPolymorphism35702888PE517Q
8UniProtVAR_012066I717VPERM_HUMANPolymorphism2759PI551V
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 8)

Asymmetric Unit (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PEROXIDASE_1PS00435 Peroxidases proximal heme-ligand signature.PERM_HUMAN408-418
 
 
 
 
 
 
 
  8C:242-252
D:242-252
G:242-252
H:242-252
K:242-252
L:242-252
O:242-252
P:242-252
Biological Unit 1 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PEROXIDASE_1PS00435 Peroxidases proximal heme-ligand signature.PERM_HUMAN408-418
 
 
 
 
 
 
 
  2C:242-252
D:242-252
-
-
-
-
-
-
Biological Unit 2 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PEROXIDASE_1PS00435 Peroxidases proximal heme-ligand signature.PERM_HUMAN408-418
 
 
 
 
 
 
 
  2-
-
G:242-252
H:242-252
-
-
-
-
Biological Unit 3 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PEROXIDASE_1PS00435 Peroxidases proximal heme-ligand signature.PERM_HUMAN408-418
 
 
 
 
 
 
 
  2-
-
-
-
K:242-252
L:242-252
-
-
Biological Unit 4 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PEROXIDASE_1PS00435 Peroxidases proximal heme-ligand signature.PERM_HUMAN408-418
 
 
 
 
 
 
 
  2-
-
-
-
-
-
O:242-252
P:242-252
Biological Unit 5 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PEROXIDASE_1PS00435 Peroxidases proximal heme-ligand signature.PERM_HUMAN408-418
 
 
 
 
 
 
 
  1C:242-252
-
-
-
-
-
-
-
Biological Unit 6 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PEROXIDASE_1PS00435 Peroxidases proximal heme-ligand signature.PERM_HUMAN408-418
 
 
 
 
 
 
 
  1-
D:242-252
-
-
-
-
-
-
Biological Unit 7 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PEROXIDASE_1PS00435 Peroxidases proximal heme-ligand signature.PERM_HUMAN408-418
 
 
 
 
 
 
 
  1-
-
G:242-252
-
-
-
-
-
Biological Unit 8 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PEROXIDASE_1PS00435 Peroxidases proximal heme-ligand signature.PERM_HUMAN408-418
 
 
 
 
 
 
 
  1-
-
-
H:242-252
-
-
-
-
Biological Unit 9 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PEROXIDASE_1PS00435 Peroxidases proximal heme-ligand signature.PERM_HUMAN408-418
 
 
 
 
 
 
 
  1-
-
-
-
K:242-252
-
-
-
Biological Unit 10 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PEROXIDASE_1PS00435 Peroxidases proximal heme-ligand signature.PERM_HUMAN408-418
 
 
 
 
 
 
 
  1-
-
-
-
-
L:242-252
-
-
Biological Unit 11 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PEROXIDASE_1PS00435 Peroxidases proximal heme-ligand signature.PERM_HUMAN408-418
 
 
 
 
 
 
 
  1-
-
-
-
-
-
O:242-252
-
Biological Unit 12 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PEROXIDASE_1PS00435 Peroxidases proximal heme-ligand signature.PERM_HUMAN408-418
 
 
 
 
 
 
 
  1-
-
-
-
-
-
-
P:242-252

(-) Exons   (9, 80)

Asymmetric Unit (9, 80)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1ENST000002252751ENSE00001151667chr17:56358296-56357966331PERM_HUMAN1-52520--
1.2ENST000002252752ENSE00000739393chr17:56357820-5635772794PERM_HUMAN52-83320--
1.3ENST000002252753ENSE00000739378chr17:56357375-56357200176PERM_HUMAN83-142600--
1.4aENST000002252754aENSE00000739375chr17:56357007-56356884124PERM_HUMAN142-183428A:1-17
B:1-17
-
-
E:1-17
F:1-17
-
-
I:1-17
J:1-17
-
-
M:1-17
N:1-17
-
-
17
17
-
-
17
17
-
-
17
17
-
-
17
17
-
-
1.4cENST000002252754cENSE00000739356chr17:56356787-56356658130PERM_HUMAN183-226448A:17-60
B:17-60
-
-
E:17-60
F:17-60
-
-
I:17-60
J:17-60
-
-
M:17-60
N:17-60
-
-
44
44
-
-
44
44
-
-
44
44
-
-
44
44
-
-
1.5ENST000002252755ENSE00000480273chr17:56356575-56356369207PERM_HUMAN227-2956916A:61-104
B:61-104
C:113-129
D:113-129
E:61-104
F:61-104
G:113-129
H:113-129
I:61-104
J:61-104
K:113-129
L:113-129
M:61-104
N:61-104
O:113-129
P:113-129
44
44
17
17
44
44
17
17
44
44
17
17
44
44
17
17
1.6ENST000002252756ENSE00000480274chr17:56355506-56355188319PERM_HUMAN296-4021078-
-
C:130-236
D:130-236
-
-
G:130-236
H:130-236
-
-
K:130-236
L:130-236
-
-
O:130-236
P:130-236
-
-
107
107
-
-
107
107
-
-
107
107
-
-
107
107
1.7ENST000002252757ENSE00000739352chr17:56353063-56352903161PERM_HUMAN402-455548-
-
C:236-289
D:236-289
-
-
G:236-289
H:236-289
-
-
K:236-289
L:236-289
-
-
O:236-289
P:236-289
-
-
54
54
-
-
54
54
-
-
54
54
-
-
54
54
1.9ENST000002252759ENSE00000480276chr17:56351030-56350775256PERM_HUMAN456-541868-
-
C:290-375
D:290-375
-
-
G:290-375
H:290-375
-
-
K:290-375
L:290-375
-
-
O:290-375
P:290-375
-
-
86
86
-
-
86
86
-
-
86
86
-
-
86
86
1.10ENST0000022527510ENSE00001743415chr17:56350279-56350109171PERM_HUMAN541-598588-
-
C:375-432
D:375-432
-
-
G:375-432
H:375-432
-
-
K:375-432
L:375-432
-
-
O:375-432
P:375-432
-
-
58
58
-
-
58
58
-
-
58
58
-
-
58
58
1.11ENST0000022527511ENSE00000739347chr17:56349253-56349016238PERM_HUMAN598-677808-
-
C:432-511
D:432-511
-
-
G:432-511
H:432-511
-
-
K:432-511
L:432-511
-
-
O:432-511
P:432-511
-
-
80
80
-
-
80
80
-
-
80
80
-
-
80
80
1.12ENST0000022527512ENSE00001151664chr17:56348224-563472171008PERM_HUMAN677-745698-
-
C:511-577
D:511-578
-
-
G:511-577
H:511-578
-
-
K:511-577
L:511-578
-
-
O:511-578
P:511-578
-
-
67
68
-
-
67
68
-
-
67
68
-
-
68
68

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:104
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:104
                                   176       186       196       206       216       226       236       246       256       266    
           PERM_HUMAN   167 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 270
               SCOP domains -------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........................ee...............................hhhhhhhhhh..hhhhh.eeeeeehhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------C-----------------------------------------------------------------------------T------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4a        -------------------------------------------Exon 1.5  PDB: A:61-104 UniProt: 227-295     Transcript 1 (1)
           Transcript 1 (2) ----------------Exon 1.4c  PDB: A:17-60 UniProt: 183-226    -------------------------------------------- Transcript 1 (2)
                 4dl1 A   1 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 104
                                    10        20        30        40        50        60        70        80        90       100    

Chain B from PDB  Type:PROTEIN  Length:104
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:104
                                   176       186       196       206       216       226       236       246       256       266    
           PERM_HUMAN   167 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 270
               SCOP domains -------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........................ee...............................hhhhhhhhhh..hhhhh.eeeeeehhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------C-----------------------------------------------------------------------------T------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4a        -------------------------------------------Exon 1.5  PDB: B:61-104 UniProt: 227-295     Transcript 1 (1)
           Transcript 1 (2) ----------------Exon 1.4c  PDB: B:17-60 UniProt: 183-226    -------------------------------------------- Transcript 1 (2)
                 4dl1 B   1 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 104
                                    10        20        30        40        50        60        70        80        90       100    

Chain C from PDB  Type:PROTEIN  Length:465
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:465
                                   288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738     
           PERM_HUMAN   279 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWRE 743
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............ee.............ee...................ee.......hhhhhh.hhhhhhhh................ee..ee.........hhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhh..eee.............eee.hhh..hhhhhhhh..hhhhhhhhhhheee........hhhhhh...........hhhhhhhhhhhhh...hhhhhhhhh......hhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh...........hhhhhhhhh..hhhhhhhhh....eee.............eee.hhh....hhhhh. Sec.struct. author
             SAPs(SNPs) (1) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q-------------------------------------------------------------------------------------------------------------------------W----------------------------------C------------------------------------------------------------------------------Q---------------------------------V-------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------PEROXIDASE_------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5         Exon 1.6  PDB: C:130-236 UniProt: 296-402                                                                  ------------------------------------------------------------------------------------------------------------------------------------------Exon 1.10  PDB: C:375-432 UniProt: 541-598                ------------------------------------------------------------------------------Exon 1.12  PDB: C:511-577 UniProt: 677-745 [INCOMPLETE]             Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------------------------------------Exon 1.7  PDB: C:236-289 UniProt: 402-455             Exon 1.9  PDB: C:290-375 UniProt: 456-541                                             --------------------------------------------------------Exon 1.11  PDB: C:432-511 UniProt: 598-677                                      ------------------------------------------------------------------ Transcript 1 (2)
                 4dl1 C 113 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRScPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWRE 577
                                   122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572     
                                                               150-CSO                                                                                                                                                                                                                                                                                                                                                                                                                                       

Chain D from PDB  Type:PROTEIN  Length:466
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:466
                                   288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738      
           PERM_HUMAN   279 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA 744
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...................................................ee.......hhhhhh.hhhhhhhh................ee..ee.........hhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhh..eee.............eee.hhh..hhhhhhhh..hhhhhhhhhhheee........hhhhhh...........hhhhhhhhhhhhh...hhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh...........hhhhhhhhh..hhhhhhhhhh...eee.............eee.hhh....hhhhh.. Sec.struct. author
             SAPs(SNPs) (1) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q-------------------------------------------------------------------------------------------------------------------------W----------------------------------C------------------------------------------------------------------------------Q---------------------------------V--------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------PEROXIDASE_-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5         Exon 1.6  PDB: D:130-236 UniProt: 296-402                                                                  ------------------------------------------------------------------------------------------------------------------------------------------Exon 1.10  PDB: D:375-432 UniProt: 541-598                ------------------------------------------------------------------------------Exon 1.12  PDB: D:511-578 UniProt: 677-745 [INCOMPLETE]              Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------------------------------------Exon 1.7  PDB: D:236-289 UniProt: 402-455             Exon 1.9  PDB: D:290-375 UniProt: 456-541                                             --------------------------------------------------------Exon 1.11  PDB: D:432-511 UniProt: 598-677                                      ------------------------------------------------------------------- Transcript 1 (2)
                 4dl1 D 113 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRScPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA 578
                                   122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572      
                                                               150-CSO                                                                                                                                                                                                                                                                                                                                                                                                                                        

Chain E from PDB  Type:PROTEIN  Length:104
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:104
                                   176       186       196       206       216       226       236       246       256       266    
           PERM_HUMAN   167 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 270
               SCOP domains -------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........................ee...............................hhhhhhhhhh..hhhhh.eeeeeehhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------C-----------------------------------------------------------------------------T------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4a        -------------------------------------------Exon 1.5  PDB: E:61-104 UniProt: 227-295     Transcript 1 (1)
           Transcript 1 (2) ----------------Exon 1.4c  PDB: E:17-60 UniProt: 183-226    -------------------------------------------- Transcript 1 (2)
                 4dl1 E   1 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 104
                                    10        20        30        40        50        60        70        80        90       100    

Chain F from PDB  Type:PROTEIN  Length:104
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:104
                                   176       186       196       206       216       226       236       246       256       266    
           PERM_HUMAN   167 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 270
               SCOP domains -------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........................ee...............................hhhhhhhhhh..hhhhh.eeeeeehhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------C-----------------------------------------------------------------------------T------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4a        -------------------------------------------Exon 1.5  PDB: F:61-104 UniProt: 227-295     Transcript 1 (1)
           Transcript 1 (2) ----------------Exon 1.4c  PDB: F:17-60 UniProt: 183-226    -------------------------------------------- Transcript 1 (2)
                 4dl1 F   1 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 104
                                    10        20        30        40        50        60        70        80        90       100    

Chain G from PDB  Type:PROTEIN  Length:465
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:465
                                   288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738     
           PERM_HUMAN   279 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWRE 743
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...................................................ee.......hhhhhh.hhhhhhhhh...............ee..ee..........hhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhh..eee.............eee.hhh...hhhhhhh..hhhhhhhhhhheee........hhhhhh...........hhhhhhhhhhhhh...hhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh...........hhhhhhhhhh.hhhhhhhhhh...eee.............eee.hhh....hhhhh. Sec.struct. author
             SAPs(SNPs) (1) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q-------------------------------------------------------------------------------------------------------------------------W----------------------------------C------------------------------------------------------------------------------Q---------------------------------V-------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------PEROXIDASE_------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5         Exon 1.6  PDB: G:130-236 UniProt: 296-402                                                                  ------------------------------------------------------------------------------------------------------------------------------------------Exon 1.10  PDB: G:375-432 UniProt: 541-598                ------------------------------------------------------------------------------Exon 1.12  PDB: G:511-577 UniProt: 677-745 [INCOMPLETE]             Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------------------------------------Exon 1.7  PDB: G:236-289 UniProt: 402-455             Exon 1.9  PDB: G:290-375 UniProt: 456-541                                             --------------------------------------------------------Exon 1.11  PDB: G:432-511 UniProt: 598-677                                      ------------------------------------------------------------------ Transcript 1 (2)
                 4dl1 G 113 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRScPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWRE 577
                                   122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572     
                                                               150-CSO                                                                                                                                                                                                                                                                                                                                                                                                                                       

Chain H from PDB  Type:PROTEIN  Length:466
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:466
                                   288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738      
           PERM_HUMAN   279 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA 744
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............ee.............ee...................ee.......hhhhhh.hhhhhhhh.......................................................hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhh..eee.............eee.hhh..hhhhhhhh..hhhhhhhhhhheee........hhhhhh..hhhhh....hhhhhhhhhhhhh...hhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh...........hhhhhhhhh..hhhhhhhhhh...eee.............eee.hhh....hhhhh.. Sec.struct. author
             SAPs(SNPs) (1) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q-------------------------------------------------------------------------------------------------------------------------W----------------------------------C------------------------------------------------------------------------------Q---------------------------------V--------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------PEROXIDASE_-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5         Exon 1.6  PDB: H:130-236 UniProt: 296-402                                                                  ------------------------------------------------------------------------------------------------------------------------------------------Exon 1.10  PDB: H:375-432 UniProt: 541-598                ------------------------------------------------------------------------------Exon 1.12  PDB: H:511-578 UniProt: 677-745 [INCOMPLETE]              Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------------------------------------Exon 1.7  PDB: H:236-289 UniProt: 402-455             Exon 1.9  PDB: H:290-375 UniProt: 456-541                                             --------------------------------------------------------Exon 1.11  PDB: H:432-511 UniProt: 598-677                                      ------------------------------------------------------------------- Transcript 1 (2)
                 4dl1 H 113 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRScPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA 578
                                   122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572      
                                                               150-CSO                                                                                                                                                                                                                                                                                                                                                                                                                                        

Chain I from PDB  Type:PROTEIN  Length:104
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:104
                                   176       186       196       206       216       226       236       246       256       266    
           PERM_HUMAN   167 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 270
               SCOP domains -------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........................ee...............................hhhhhhhhhh..hhhhh.eeeeeehhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------C-----------------------------------------------------------------------------T------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4a        -------------------------------------------Exon 1.5  PDB: I:61-104 UniProt: 227-295     Transcript 1 (1)
           Transcript 1 (2) ----------------Exon 1.4c  PDB: I:17-60 UniProt: 183-226    -------------------------------------------- Transcript 1 (2)
                 4dl1 I   1 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 104
                                    10        20        30        40        50        60        70        80        90       100    

Chain J from PDB  Type:PROTEIN  Length:104
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:104
                                   176       186       196       206       216       226       236       246       256       266    
           PERM_HUMAN   167 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 270
               SCOP domains -------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........................ee...............................hhhhhhhhhh..hhhhh.eeeeeehhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------C-----------------------------------------------------------------------------T------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4a        -------------------------------------------Exon 1.5  PDB: J:61-104 UniProt: 227-295     Transcript 1 (1)
           Transcript 1 (2) ----------------Exon 1.4c  PDB: J:17-60 UniProt: 183-226    -------------------------------------------- Transcript 1 (2)
                 4dl1 J   1 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 104
                                    10        20        30        40        50        60        70        80        90       100    

Chain K from PDB  Type:PROTEIN  Length:465
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:465
                                   288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738     
           PERM_HUMAN   279 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWRE 743
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...................................................ee.......hhhhhh.hhhhhhhh................................hhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhh..eee.............eee.hhh..hhhhhhhh.hhhhhhhhhhh.eee........hhhhhh..hhhhh....hhhhhhhhhhhhh...hhhhhhhhh......hhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh...........hhhhhhhhh..hhhhhhhhhh...eee.............eee.hhh....hhhhh. Sec.struct. author
             SAPs(SNPs) (1) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q-------------------------------------------------------------------------------------------------------------------------W----------------------------------C------------------------------------------------------------------------------Q---------------------------------V-------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------PEROXIDASE_------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5         Exon 1.6  PDB: K:130-236 UniProt: 296-402                                                                  ------------------------------------------------------------------------------------------------------------------------------------------Exon 1.10  PDB: K:375-432 UniProt: 541-598                ------------------------------------------------------------------------------Exon 1.12  PDB: K:511-577 UniProt: 677-745 [INCOMPLETE]             Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------------------------------------Exon 1.7  PDB: K:236-289 UniProt: 402-455             Exon 1.9  PDB: K:290-375 UniProt: 456-541                                             --------------------------------------------------------Exon 1.11  PDB: K:432-511 UniProt: 598-677                                      ------------------------------------------------------------------ Transcript 1 (2)
                 4dl1 K 113 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRScPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWRE 577
                                   122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572     
                                                               150-CSO                                                                                                                                                                                                                                                                                                                                                                                                                                       

Chain L from PDB  Type:PROTEIN  Length:466
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:466
                                   288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738      
           PERM_HUMAN   279 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA 744
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...................................................ee.......hhhhhh.hhhhhhhh................ee..ee.........hhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhh..eee.............eee.hhh...hhhhhhh..hhhhhhhhhhheee........hhhhhh...........hhhhhhhhhhhhh...hhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh...........hhhhhhhhh..hhhhhhhhhh...eee.............eee.hhh....hhhhh.. Sec.struct. author
             SAPs(SNPs) (1) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q-------------------------------------------------------------------------------------------------------------------------W----------------------------------C------------------------------------------------------------------------------Q---------------------------------V--------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------PEROXIDASE_-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5         Exon 1.6  PDB: L:130-236 UniProt: 296-402                                                                  ------------------------------------------------------------------------------------------------------------------------------------------Exon 1.10  PDB: L:375-432 UniProt: 541-598                ------------------------------------------------------------------------------Exon 1.12  PDB: L:511-578 UniProt: 677-745 [INCOMPLETE]              Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------------------------------------Exon 1.7  PDB: L:236-289 UniProt: 402-455             Exon 1.9  PDB: L:290-375 UniProt: 456-541                                             --------------------------------------------------------Exon 1.11  PDB: L:432-511 UniProt: 598-677                                      ------------------------------------------------------------------- Transcript 1 (2)
                 4dl1 L 113 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRScPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA 578
                                   122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572      
                                                               150-CSO                                                                                                                                                                                                                                                                                                                                                                                                                                        

Chain M from PDB  Type:PROTEIN  Length:104
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:104
                                   176       186       196       206       216       226       236       246       256       266    
           PERM_HUMAN   167 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 270
               SCOP domains -------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........................ee...............................hhhhhhhhhh..hhhhh.eeeeeehhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------C-----------------------------------------------------------------------------T------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4a        -------------------------------------------Exon 1.5  PDB: M:61-104 UniProt: 227-295     Transcript 1 (1)
           Transcript 1 (2) ----------------Exon 1.4c  PDB: M:17-60 UniProt: 183-226    -------------------------------------------- Transcript 1 (2)
                 4dl1 M   1 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 104
                                    10        20        30        40        50        60        70        80        90       100    

Chain N from PDB  Type:PROTEIN  Length:104
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:104
                                   176       186       196       206       216       226       236       246       256       266    
           PERM_HUMAN   167 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 270
               SCOP domains -------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........................ee...............................hhhhhhhhhh..hhhhh.eeeeeehhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------C-----------------------------------------------------------------------------T------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4a        -------------------------------------------Exon 1.5  PDB: N:61-104 UniProt: 227-295     Transcript 1 (1)
           Transcript 1 (2) ----------------Exon 1.4c  PDB: N:17-60 UniProt: 183-226    -------------------------------------------- Transcript 1 (2)
                 4dl1 N   1 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 104
                                    10        20        30        40        50        60        70        80        90       100    

Chain O from PDB  Type:PROTEIN  Length:466
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:466
                                   288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738      
           PERM_HUMAN   279 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA 744
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...................................................ee.......hhhhhh.hhhhhhhh...............................hhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhh..eee.............eee.hhh..hhhhhhhh..hhhhhhhhhh.eee........hhhhhh...........hhhhhhhhhhhhh...hhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh...........hhhhhhhhh..hhhhhhhhhh...eee.............eee.hhh....hhhhh.. Sec.struct. author
             SAPs(SNPs) (1) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q-------------------------------------------------------------------------------------------------------------------------W----------------------------------C------------------------------------------------------------------------------Q---------------------------------V--------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------PEROXIDASE_-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5         Exon 1.6  PDB: O:130-236 UniProt: 296-402                                                                  ------------------------------------------------------------------------------------------------------------------------------------------Exon 1.10  PDB: O:375-432 UniProt: 541-598                ------------------------------------------------------------------------------Exon 1.12  PDB: O:511-578 UniProt: 677-745 [INCOMPLETE]              Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------------------------------------Exon 1.7  PDB: O:236-289 UniProt: 402-455             Exon 1.9  PDB: O:290-375 UniProt: 456-541                                             --------------------------------------------------------Exon 1.11  PDB: O:432-511 UniProt: 598-677                                      ------------------------------------------------------------------- Transcript 1 (2)
                 4dl1 O 113 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRScPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA 578
                                   122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572      
                                                               150-CSO                                                                                                                                                                                                                                                                                                                                                                                                                                        

Chain P from PDB  Type:PROTEIN  Length:466
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:466
                                   288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738      
           PERM_HUMAN   279 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA 744
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............ee.............ee...................ee.......hhhhhh.hhhhhhhh...............................hhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhh..eee.............eee.hhh..hhhhhhhh..hhhhhhhhhh.eee........hhhhhh...........hhhhhhhhhhhhh...hhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhh........hhhhhhhhhhhhhhhhhh...........hhhhhhhhh..hhhhhhhhhh...eee.............eee.hhh....hhhhh.. Sec.struct. author
             SAPs(SNPs) (1) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q-------------------------------------------------------------------------------------------------------------------------W----------------------------------C------------------------------------------------------------------------------Q---------------------------------V--------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------PEROXIDASE_-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5         Exon 1.6  PDB: P:130-236 UniProt: 296-402                                                                  ------------------------------------------------------------------------------------------------------------------------------------------Exon 1.10  PDB: P:375-432 UniProt: 541-598                ------------------------------------------------------------------------------Exon 1.12  PDB: P:511-578 UniProt: 677-745 [INCOMPLETE]              Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------------------------------------Exon 1.7  PDB: P:236-289 UniProt: 402-455             Exon 1.9  PDB: P:290-375 UniProt: 456-541                                             --------------------------------------------------------Exon 1.11  PDB: P:432-511 UniProt: 598-677                                      ------------------------------------------------------------------- Transcript 1 (2)
                 4dl1 P 113 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRScPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA 578
                                   122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572      
                                                               150-CSO                                                                                                                                                                                                                                                                                                                                                                                                                                        

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4DL1)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4DL1)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4DL1)

(-) Gene Ontology  (30, 30)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P   (PERM_HUMAN | P05164)
molecular function
    GO:0003682    chromatin binding    Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
    GO:0020037    heme binding    Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
    GO:0008201    heparin binding    Interacting selectively and non-covalently with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0004601    peroxidase activity    Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
biological process
    GO:0007568    aging    A developmental process that is a deterioration and loss of function over time. Aging includes loss of functions such as resistance to disease, homeostasis, and fertility, as well as wear and tear. Aging includes cellular senescence, but is more inclusive. May precede death and may succeed developmental maturation (GO:0021700).
    GO:0006952    defense response    Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
    GO:0050832    defense response to fungus    Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
    GO:0042744    hydrogen peroxide catabolic process    The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2).
    GO:0002149    hypochlorous acid biosynthetic process    The chemical reactions and pathways resulting in the formation of hypochlorous acid.
    GO:0034374    low-density lipoprotein particle remodeling    The acquisition, loss or modification of a protein or lipid within a low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters from LDL to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride to LDL.
    GO:0043066    negative regulation of apoptotic process    Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
    GO:0044130    negative regulation of growth of symbiont in host    Any process in which the symbiont stops, prevents or reduces its increase in size or mass within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0019430    removal of superoxide radicals    Any process, acting at the cellular level, involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2).
    GO:0002679    respiratory burst involved in defense response    A phase of elevated metabolic activity, during which oxygen consumption increases made as part of a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.
    GO:0032094    response to food    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat.
    GO:1990268    response to gold nanoparticle    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gold nanoparticle stimulus.
    GO:0032496    response to lipopolysaccharide    Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
    GO:0009612    response to mechanical stimulus    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus.
    GO:0006979    response to oxidative stress    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
    GO:0001878    response to yeast    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a yeast species.
cellular component
    GO:0042582    azurophil granule    Primary lysosomal granule found in neutrophil granulocytes. Contains a wide range of hydrolytic enzymes and is released into the extracellular fluid.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
    GO:0005764    lysosome    A small lytic vacuole that has cell cycle-independent morphology and is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0030141    secretory granule    A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PERM_HUMAN | P051641cxp 1d2v 1d5l 1d7w 1dnu 1dnw 1mhl 1myp 3f9p 3zs0 3zs1 4c1m 4ejx 5fiw 5mfa

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4DL1)