4C1M - JenaLib

Asymmetric Unit (25, 25)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	MET A:87 , GLN A:91 , ASP A:94 , ASP A:98 , PHE A:99 , THR A:100 , NIH A:606 , HOH A:2101 , HOH A:2102 , ARG C:239 , GLU C:242 , MET C:243 , THR C:329 , PHE C:332 , ARG C:333 , GLY C:335 , HIS C:336 , ILE C:339 , PHE C:365 , PHE C:407 , LEU C:417 , ARG C:424	BINDING SITE FOR RESIDUE HEM A 605
02	AC2	SOFTWARE	GLN A:91 , HIS A:95 , HEM A:605 , HOH A:2101 , PRO C:220 , THR C:238 , ARG C:239 , GLU C:242 , PHE C:366 , HOH C:2009 , HOH C:2018	BINDING SITE FOR RESIDUE NIH A 606
03	AC3	SOFTWARE	MET B:87 , ASP B:94 , ASP B:98 , PHE B:99 , THR B:100 , NIH B:606 , HOH B:2103 , HOH B:2107 , ARG D:239 , GLU D:242 , MET D:243 , THR D:329 , PHE D:332 , ARG D:333 , GLY D:335 , HIS D:336 , ILE D:339 , PHE D:365 , PHE D:407 , LEU D:417 , ARG D:424	BINDING SITE FOR RESIDUE HEM B 605
04	AC4	SOFTWARE	GLN B:91 , HIS B:95 , HEM B:605 , HOH B:2103 , HOH B:2107 , PRO D:220 , THR D:238 , ARG D:239 , GLU D:242 , PHE D:366 , VAL D:410 , MET D:411	BINDING SITE FOR RESIDUE NIH B 606
05	AC5	SOFTWARE	HOH B:2108	BINDING SITE FOR RESIDUE SO4 B1003
06	AC6	SOFTWARE	THR C:304 , LYS C:486 , ARG C:487 , HOH C:2208	BINDING SITE FOR RESIDUE GOL C 631
07	AC7	SOFTWARE	ASP A:96 , THR C:168 , PHE C:170 , ASP C:172 , SER C:174	BINDING SITE FOR RESIDUE CA C1579
08	AC8	SOFTWARE	TRP A:32 , VAL C:327 , TRP C:436	BINDING SITE FOR RESIDUE CL C1580
09	AC9	SOFTWARE	ARG C:229 , THR C:447 , GLY C:449 , GLN C:450 , HOH C:2193	BINDING SITE FOR RESIDUE SO4 C1581
10	BC1	SOFTWARE	MET C:522 , ARG C:525 , HOH C:2242	BINDING SITE FOR RESIDUE ACT C1582
11	BC2	SOFTWARE	PRO C:303 , ARG C:307 , ARG C:487 , LYS C:488	BINDING SITE FOR RESIDUE ACT C1583
12	BC3	SOFTWARE	THR D:304 , LYS D:486 , ARG D:487	BINDING SITE FOR RESIDUE GOL D 631
13	BC4	SOFTWARE	ASP B:96 , THR D:168 , PHE D:170 , ASP D:172 , SER D:174	BINDING SITE FOR RESIDUE CA D1579
14	BC5	SOFTWARE	ARG B:31 , TRP B:32 , ASN D:326 , VAL D:327 , TRP D:436	BINDING SITE FOR RESIDUE CL D1580
15	BC6	SOFTWARE	PRO D:151 , ARG D:161	BINDING SITE FOR RESIDUE ACT D1581
16	BC7	SOFTWARE	MET D:522 , ARG D:525	BINDING SITE FOR RESIDUE ACT D1582
17	BC8	SOFTWARE	PRO D:303 , ARG D:487	BINDING SITE FOR RESIDUE ACT D1583
18	BC9	SOFTWARE	PRO A:101 , GLU A:102 , PRO A:103 , HOH A:2098 , ARG C:148 , SER C:149 , PRO C:151 , HOH C:2041	BINDING SITE FOR LIGAND CSO C 150 BOUND TO SER C 149
19	CC1	SOFTWARE	ASN C:189 , ASN C:192 , LEU C:196 , ALA C:198 , VAL C:199 , GLN C:201 , HOH C:2069	BINDING SITE FOR MONO-SACCHARIDE NAG C1620 BOUND TO ASN C 189
20	CC2	SOFTWARE	ASN C:225 , SER C:227 , ALA C:228 , TRP C:369 , LEU C:373	BINDING SITE FOR MONO-SACCHARIDE NAG C1630 BOUND TO ASN C 225
21	CC3	SOFTWARE	TRP B:32 , LEU B:33 , ASN C:317 , VAL C:320 , ARG C:504 , HOH C:2148 , HOH C:2244 , HOH C:2246 , HOH C:2247 , HOH C:2248 , HOH C:2249 , HOH C:2250 , HOH C:2251 , HOH C:2253 , HOH C:2254 , LYS D:308 , PHE D:439 , GLY D:441 , LYS D:505 , MAN D:2644 , FUC D:2645	BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG C1640 THROUGH FUC C1645 BOUND TO ASN C 317
22	CC4	SOFTWARE	PRO B:101 , GLU B:102 , PRO B:103 , HOH B:2098 , ARG D:148 , SER D:149 , PRO D:151 , GLN D:163	BINDING SITE FOR LIGAND CSO D 150 BOUND TO SER D 149
23	CC5	SOFTWARE	ASN D:189 , ASN D:192 , ALA D:198 , VAL D:199 , GLN D:201 , HOH D:2049 , HOH D:2051 , HOH D:2193	BINDING SITE FOR MONO-SACCHARIDE NAG D2620 BOUND TO ASN D 189
24	CC6	SOFTWARE	ASN D:225 , ALA D:228 , TRP D:369	BINDING SITE FOR MONO-SACCHARIDE NAG D2630 BOUND TO ASN D 225
25	CC7	SOFTWARE	TRP A:32 , LEU A:33 , HOH A:2044 , LYS C:308 , PHE C:439 , GLY C:441 , LYS C:505 , MAN C:1644 , FUC C:1645 , HOH C:2137 , HOH C:2186 , HOH C:2188 , HOH C:2253 , HOH C:2254 , ASN D:317 , SER D:319 , VAL D:320 , ARG D:504 , HOH D:2194	BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG D2640 THROUGH FUC D2645 BOUND TO ASN D 317

SS Bonds (8, 8)

Cis Peptide Bonds (8, 8)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (8, 16)

PROSITE Motifs (1, 2)

Exons (9, 20)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:102
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:102
                                   179       189       199       209       219       229       239       249       259       269  
           PERM_HUMAN   170 QDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAA 271
               SCOP domains ------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......................ee...............................hhhhhhhhhh..hhhhh.eeeeeehhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ---C-----------------------------------------------------------------------------T-------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------ PROSITE
           Transcript 1 (1) Exon 1.4a     -------------------------------------------Exon 1.5  PDB: A:61-105 UniProt: 227-295      Transcript 1 (1)
           Transcript 1 (2) -------------Exon 1.4c  PDB: A:17-60 UniProt: 183-226    --------------------------------------------- Transcript 1 (2)
                 4c1m A   4 QDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAA 105
                                    13        23        33        43        53        63        73        83        93       103

Chain B from PDB  Type:PROTEIN  Length:105
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:105
                                   176       186       196       206       216       226       236       246       256       266     
           PERM_HUMAN   167 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAA 271
               SCOP domains --------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........................ee...............................hhhhhhhhhh..hhhhh.eeeeeehhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------C-----------------------------------------------------------------------------T-------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4a        -------------------------------------------Exon 1.5  PDB: B:61-105 UniProt: 227-295      Transcript 1 (1)
           Transcript 1 (2) ----------------Exon 1.4c  PDB: B:17-60 UniProt: 183-226    --------------------------------------------- Transcript 1 (2)
                 4c1m B   1 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAA 105
                                    10        20        30        40        50        60        70        80        90       100

Chain C from PDB  Type:PROTEIN  Length:467
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:467
                                   288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       
           PERM_HUMAN   279 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREAS 745
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............ee.............ee...................ee.......hhhhhh.hhhhhhhh................................hhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhh..eee.............eee.hhh..hhhhhhhh..hhhhhhhhhhheee........hhhhhh...........hhhhhhhhhhhhh...hhhhhhhhh......hhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh...........hhhhhhhhh..hhhhhhhhhh...eee.............eee.hhh....hhhhh... Sec.struct. author
             SAPs(SNPs) (1) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q-------------------------------------------------------------------------------------------------------------------------W----------------------------------C------------------------------------------------------------------------------Q---------------------------------V---------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------PEROXIDASE_--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5         Exon 1.6  PDB: C:130-236 UniProt: 296-402                                                                  ------------------------------------------------------------------------------------------------------------------------------------------Exon 1.10  PDB: C:375-432 UniProt: 541-598                ------------------------------------------------------------------------------Exon 1.12  PDB: C:511-579 UniProt: 677-745                            Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------------------------------------Exon 1.7  PDB: C:236-289 UniProt: 402-455             Exon 1.9  PDB: C:290-375 UniProt: 456-541                                             --------------------------------------------------------Exon 1.11  PDB: C:432-511 UniProt: 598-677                                      -------------------------------------------------------------------- Transcript 1 (2)
                 4c1m C 113 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRScPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREAS 579
                                   122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       
                                                               150-CSO

Chain D from PDB  Type:PROTEIN  Length:467
 aligned with PERM_HUMAN | P05164 from UniProtKB/Swiss-Prot  Length:745

    Alignment length:467
                                   288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       
           PERM_HUMAN   279 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREAS 745
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...................................................ee.......hhhhhh.hhhhhhhh...............................hhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhh..eee.............eee.hhh...hhhhhhh..hhhhhhhhhhheee........hhhhhh...........hhhhhhhhhhhhh...hhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh...........hhhhhhhhh..hhhhhhhhhh...eee.............eee.hhh....hhhhh... Sec.struct. author
             SAPs(SNPs) (1) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q-------------------------------------------------------------------------------------------------------------------------W----------------------------------C------------------------------------------------------------------------------Q---------------------------------V---------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------PEROXIDASE_--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5         Exon 1.6  PDB: D:130-236 UniProt: 296-402                                                                  ------------------------------------------------------------------------------------------------------------------------------------------Exon 1.10  PDB: D:375-432 UniProt: 541-598                ------------------------------------------------------------------------------Exon 1.12  PDB: D:511-579 UniProt: 677-745                            Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------------------------------------Exon 1.7  PDB: D:236-289 UniProt: 402-455             Exon 1.9  PDB: D:290-375 UniProt: 456-541                                             --------------------------------------------------------Exon 1.11  PDB: D:432-511 UniProt: 598-677                                      -------------------------------------------------------------------- Transcript 1 (2)
                 4c1m D 113 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRScPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREAS 579
                                   122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       
                                                               150-CSO

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (30, 30)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (PERM_HUMAN | P05164)

molecular function
	GO:0003682	chromatin binding	Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
	GO:0020037	heme binding	Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
	GO:0008201	heparin binding	Interacting selectively and non-covalently with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0004601	peroxidase activity	Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
biological process
	GO:0007568	aging	A developmental process that is a deterioration and loss of function over time. Aging includes loss of functions such as resistance to disease, homeostasis, and fertility, as well as wear and tear. Aging includes cellular senescence, but is more inclusive. May precede death and may succeed developmental maturation (GO:0021700).
	GO:0006952	defense response	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
	GO:0050832	defense response to fungus	Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
	GO:0042744	hydrogen peroxide catabolic process	The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2).
	GO:0002149	hypochlorous acid biosynthetic process	The chemical reactions and pathways resulting in the formation of hypochlorous acid.
	GO:0034374	low-density lipoprotein particle remodeling	The acquisition, loss or modification of a protein or lipid within a low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters from LDL to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride to LDL.
	GO:0043066	negative regulation of apoptotic process	Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
	GO:0044130	negative regulation of growth of symbiont in host	Any process in which the symbiont stops, prevents or reduces its increase in size or mass within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
	GO:0019430	removal of superoxide radicals	Any process, acting at the cellular level, involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2).
	GO:0002679	respiratory burst involved in defense response	A phase of elevated metabolic activity, during which oxygen consumption increases made as part of a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.
	GO:0032094	response to food	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat.
	GO:1990268	response to gold nanoparticle	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gold nanoparticle stimulus.
	GO:0032496	response to lipopolysaccharide	Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
	GO:0009612	response to mechanical stimulus	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus.
	GO:0006979	response to oxidative stress	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
	GO:0001878	response to yeast	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a yeast species.
cellular component
	GO:0042582	azurophil granule	Primary lysosomal granule found in neutrophil granulocytes. Contains a wide range of hydrolytic enzymes and is released into the extracellular fluid.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0005615	extracellular space	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
	GO:0005764	lysosome	A small lytic vacuole that has cell cycle-independent morphology and is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.
	GO:0005739	mitochondrion	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
	GO:0030141	secretory granule	A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules.

Visualization

Interactive Views

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		ACT	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		BMA	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		CA	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		CL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		CSO	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		FUC	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		GOL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		HEM	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		MAN	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		NAG	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		NIH	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		SO4	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]
		AC8	[ RasMol ]	+environment [ RasMol ]
		AC9	[ RasMol ]	+environment [ RasMol ]
		BC1	[ RasMol ]	+environment [ RasMol ]
		BC2	[ RasMol ]	+environment [ RasMol ]
		BC3	[ RasMol ]	+environment [ RasMol ]
		BC4	[ RasMol ]	+environment [ RasMol ]
		BC5	[ RasMol ]	+environment [ RasMol ]
		BC6	[ RasMol ]	+environment [ RasMol ]
		BC7	[ RasMol ]	+environment [ RasMol ]
		BC8	[ RasMol ]	+environment [ RasMol ]
		BC9	[ RasMol ]	+environment [ RasMol ]
		CC1	[ RasMol ]	+environment [ RasMol ]
		CC2	[ RasMol ]	+environment [ RasMol ]
		CC3	[ RasMol ]	+environment [ RasMol ]
		CC4	[ RasMol ]	+environment [ RasMol ]
		CC5	[ RasMol ]	+environment [ RasMol ]
		CC6	[ RasMol ]	+environment [ RasMol ]
		CC7	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Asn C:549 - Asn C:550	[ RasMol ]
		Asn D:549 - Asn D:550	[ RasMol ]
		Glu C:354 - Pro C:355	[ RasMol ]
		Glu D:354 - Pro D:355	[ RasMol ]
		Pro C:123 - Pro C:124	[ RasMol ]
		Pro D:123 - Pro D:124	[ RasMol ]
		Tyr C:557 - Pro C:558	[ RasMol ]
		Tyr D:557 - Pro D:558	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (12, 35)

Sites (25, 25)

SS Bonds (8, 8)

Cis Peptide Bonds (8, 8)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (8, 16)

PROSITE Motifs (1, 2)

Exons (9, 20)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (30, 30)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File