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(-) Description

Title :  G4 MUTANT OF PAS, ARYLSULFATASE FROM PSEUDOMONAS AERUGINOSA, IN COMPLEX WITH PHENYLPHOSPHONIC ACID
 
Authors :  C. M. Miton, S. Jonas, M. F. Mohammed, G. Fischer, B. V. Loo, B. Kintses, M N. Tokuriki, F. Hollfelder
Date :  08 Apr 14  (Deposition) - 13 May 15  (Release) - 13 May 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Hydrolase, Catalytic Promiscuity, Directed Evolution, Neutral Drift, Sulfatase, Superfamily (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. M. Miton, S. Jonas, M. F. Mohammed, G. Fischer, B. V. Loo, B. Kintses
G4 Mutant Of Pas, Arylsulfatase From Pseudomonas Aeruginosa, I
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ARYLSULFATASE
    Chains: A, B
    EC Number: 3.1.6.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PRSF-DUET
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Mutation: YES
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 287

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 11)

Asymmetric Unit (4, 11)
No.NameCountTypeFull Name
1CA2Ligand/IonCALCIUM ION
2DDZ2Mod. Amino Acid3,3-DIHYDROXY L-ALANINE
3SO42Ligand/IonSULFATE ION
4SV75Ligand/IonPHENYLPHOSPHONIC ACID
Biological Unit 1 (3, 4)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2DDZ1Mod. Amino Acid3,3-DIHYDROXY L-ALANINE
3SO41Ligand/IonSULFATE ION
4SV72Ligand/IonPHENYLPHOSPHONIC ACID
Biological Unit 2 (3, 5)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2DDZ1Mod. Amino Acid3,3-DIHYDROXY L-ALANINE
3SO41Ligand/IonSULFATE ION
4SV73Ligand/IonPHENYLPHOSPHONIC ACID

(-) Sites  (9, 9)

Asymmetric Unit (9, 9)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:13 , ASP A:14 , DDZ A:51 , ASP A:317 , ASN A:318BINDING SITE FOR RESIDUE CA A1529
2AC2SOFTWAREHIS A:452 , THR A:456 , HOH A:2107 , ASN B:455BINDING SITE FOR RESIDUE SO4 A1530
3AC3SOFTWAREDDZ A:51 , MET A:72 , LYS A:113 , HIS A:115 , GLY A:138 , THR A:160 , HIS A:211 , LYS A:375BINDING SITE FOR RESIDUE SV7 A1531
4AC4SOFTWARELYS A:275 , VAL A:357 , TRP A:358BINDING SITE FOR RESIDUE SV7 A1532
5AC5SOFTWAREASP B:13 , ASP B:14 , DDZ B:51 , ASP B:317 , ASN B:318BINDING SITE FOR RESIDUE CA B1529
6AC6SOFTWAREASN A:455 , ARG B:438 , HIS B:452 , THR B:456 , HOH B:2100 , HOH B:2102BINDING SITE FOR RESIDUE SO4 B1530
7AC7SOFTWAREASP A:229 , TRP A:265 , ARG A:273 , ARG B:236 , GLN B:237 , LEU B:240 , LYS B:244 , HOH B:2067BINDING SITE FOR RESIDUE SV7 B1531
8AC8SOFTWAREARG A:236 , GLN A:237 , LYS A:244 , HOH A:2070 , ASP B:229 , TRP B:265 , ARG B:273BINDING SITE FOR RESIDUE SV7 B1532
9AC9SOFTWAREDDZ B:51 , MET B:72 , HIS B:115 , GLY B:138 , ALA B:139 , THR B:160 , HIS B:211 , LYS B:375BINDING SITE FOR RESIDUE SV7 B1533

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4CXS)

(-) Cis Peptide Bonds  (9, 9)

Asymmetric Unit
No.Residues
1Ala A:209 -Pro A:210
2Trp A:212 -Pro A:213
3Gly A:332 -Pro A:333
4Ala A:369 -Pro A:370
5Ala A:480 -Pro A:481
6Ala B:209 -Pro B:210
7Trp B:212 -Pro B:213
8Ala B:369 -Pro B:370
9Ala B:480 -Pro B:481

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4CXS)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4CXS)

(-) Exons   (0, 0)

(no "Exon" information available for 4CXS)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:522
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeee........hhhh....hhhhhhhhhhheee..ee...hhhhhhhhhh...hhhhhh........................hhhhhhhhh..eeeeeee.....hhhhh.......eeeee..................hhhhhh....eee..ee........hhhhhhhhhhhhhhhh......eeeeee..........hhhhhhhhh....hhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeeeee...........hhhhh.hhhhhhhhhh..hhhhh........hhhhhhhhhhh.........hhhhhh..eeee.........ee...ee..hhhhhhhhhhh......ee..ee........hhhhhh...........eeeeee..eeeeee..eeeee.........eeeee..............hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4cxs A   3 KRPNFLVIVADDLGFSDIGTFGGEIATPNLDALAIAGLRLTDFHTASAaSPTRSMLLTGTDHHIAGIGTMAEALLEGKPGYEGHLNERVVALPELLREAGYQTLMAGKWHLGLKPEQTPHARGFERSFALLPGAANHYGFEPPYDESTPRILKGTPALYVEDERYLDTLPEGFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPREIVEKYRGRYDAGPEALRQERLARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLEAFPKFGPDLLDFLDRHYDNSLENIGRANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGAISHAFATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGETEAAHDENTVTGWGLFGMRAIRQGDWKAVYLPAPVGPATWQLYDLARDPGEIHDLADSQPGKLAELIEHWKRYVSDTGVV 527
                                    12        22        32        42        52        62        72   ||   85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525  
                                                                           51-DDZ                   76|                                                                                                                                                                                                                                                                                                                                                                                                                                                               
                                                                                                     80                                                                                                                                                                                                                                                                                                                                                                                                                                                               


Chain B from PDB  Type:PROTEIN  Length:515
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee........hhhh....hhhhhhhhhhheee..ee...hhhhhhhh.....hhhhhh..................hhhhhhhhh..eeeeeee.....hhhhh.......eeeee..................hhhhhh....eee..ee........hhhhhhhhhhhhhhhh......eeeeee..........hhhhhhhhh....hhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeeeee................hhhhhhhhhh..hhhhh........hhhhhhhhhhh.........hhhhhh..eeee.........ee...ee..hhhhhhhhhhh......ee..ee........hhhhhh...........eeeeee..eeeeee..eeeee.........eeeee..............hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cxs B   3 KRPNFLVIVADDLGFSDIGTFGGEIATPNLDALAIAGLRLTDFHTASAaSPTRSMLLTGTDHHIAGIGTMAEAGYEGHLNERVVALPELLREAGYQTLMAGKWHLGLKPEQTPHARGFERSFALLPGAANHYGFEPPYDESTPRILKGTPALYVEDERYLDTLPEGFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPREIVEKYRGRYDAGPEALRQERLARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLEAFKFGPDLLDFLDRHYDNSLENIGRANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGAISHAFATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGETEAAHDENTVTGWGLFGMRAIRQGDWKAVYLPAPVGPATWQLYDLARDPGEIHDLADSQPGKLAELIEHWKRYVSDTGVV 527
                                    12        22        32        42        52        62        72  ||    91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321      |332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522     
                                                                           51-DDZ                  75|                                                                                                                                                                                                                                                328|                                                                                                                                                                                                     
                                                                                                    85                                                                                                                                                                                                                                                 330
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4CXS)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4CXS)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4CXS)

(-) Gene Ontology  (8, 8)

Asymmetric Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Ala A:209 - Pro A:210   [ RasMol ]  
    Ala A:369 - Pro A:370   [ RasMol ]  
    Ala A:480 - Pro A:481   [ RasMol ]  
    Ala B:209 - Pro B:210   [ RasMol ]  
    Ala B:369 - Pro B:370   [ RasMol ]  
    Ala B:480 - Pro B:481   [ RasMol ]  
    Gly A:332 - Pro A:333   [ RasMol ]  
    Trp A:212 - Pro A:213   [ RasMol ]  
    Trp B:212 - Pro B:213   [ RasMol ]  
 
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        ARS_PSEAE | P51691: 1hdh 4cxk 4cxu 4cyr 4cys 5aj9

(-) Related Entries Specified in the PDB File

4cxk G9 MUTANT OF PAS, ARYLSULFATASE FROM PSEUDOMONAS AERUGINOSA
4cxu G4 MUTANT OF PAS, ARYLSULFATASE FROM PSEUDOMONAS AERUGINOSA, IN COMPLEX WITH 3-BR-PHENOLPHENYLPHOSPHONATE