Chain A from PDB Type:PROTEIN Length:219
aligned with CASP6_HUMAN | P55212 from UniProtKB/Swiss-Prot Length:293
Alignment length:263
39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289
CASP6_HUMAN 30 MFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTKKLHFFPKS 292
SCOP domains d3s8ea_ A: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ................eeeeee....hhhhh.....hhhhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhh.......eeeeee......eee....eeehhhhhhhhh...hhhhh...eeeeee..--------------------------------.eee......eeeee....-------....hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh...-----.........eeee............ Sec.struct. author
SAPs(SNPs) -----K-------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -------------CASPASE_P20 PDB: A:43-163 UniProt: 43-167 ----------------------------CASPASE_P10 PDB: A:196-290 UniProt: 196-290 -- PROSITE (1)
PROSITE (2) ------------------------------------------------------------------------------CASPASE_HIS -------------------------------CASPASE_CYS ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.4b PDB: A:30-77 UniProt: 28-77 -------------------------Exon 1.6c PDB: A:103-161 UniProt: 103-161 Exon 1.7c PDB: A:162-214 (gaps) UniProt: 162-215 ----------------------------------------------------------------------------- Transcript 1 (1)
Transcript 1 (2) -----------------------------------------------Exon 1.5b PDB: A:77-103 ---------------------------------------------------------------------------------------------------------------Exon 1.8d PDB: A:222-292 (gaps) UniProt: 215-293 [INCOMPLETE] Transcript 1 (2)
3s8e A 30 MFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC--------------------------------SVYTLPAGADFLMCYSVAE-------TVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVDQRRVD-----SAIGKKQVPCFASMLTKKLHFFPKS 292
39 49 59 69 79 89 99 109 119 129 139 149 159 | - - - |199 209 | - | 229 239 249 259 | 269 279 289
163 196 214 222 262 268
Chain B from PDB Type:PROTEIN Length:214
aligned with CASP6_HUMAN | P55212 from UniProtKB/Swiss-Prot Length:293
Alignment length:262
39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289
CASP6_HUMAN 30 MFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTKKLHFFPK 291
SCOP domains d3s8eb_ B: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ................eeeeee....hhhhh.....hhhhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhh.......eeeeee......eee....eeehhhhhhhhh...hhhhh...eeeeee..--------------------------------.eee......eeeee...--------....hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..--------.......eeee........... Sec.struct. author
SAPs(SNPs) -----K-------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -------------CASPASE_P20 PDB: B:43-163 UniProt: 43-167 ----------------------------CASPASE_P10 PDB: B:196-290 UniProt: 196-290 - PROSITE (1)
PROSITE (2) ------------------------------------------------------------------------------CASPASE_HIS -------------------------------CASPASE_CYS ------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
Transcript 1 (1) Exon 1.4b PDB: B:30-77 UniProt: 28-77 -------------------------Exon 1.6c PDB: B:103-161 UniProt: 103-161 Exon 1.7c PDB: B:162-213 (gaps) UniProt: 162-215 ---------------------------------------------------------------------------- Transcript 1 (1)
Transcript 1 (2) -----------------------------------------------Exon 1.5b PDB: B:77-103 ---------------------------------------------------------------------------------------------------------------Exon 1.8d PDB: B:222-291 (gaps) UniProt: 215-293 [INCOMPLETE] Transcript 1 (2)
3s8e B 30 MFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC--------------------------------SVYTLPAGADFLMCYSVA--------TVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVDQRRV--------IGKKQVPCFASMLTKKLHFFPK 291
39 49 59 69 79 89 99 109 119 129 139 149 159 | - - - |199 209 | - | 229 239 249 259 | -| 279 289
163 196 213 222 261 270
Chain C from PDB Type:PROTEIN Length:219
aligned with CASP6_HUMAN | P55212 from UniProtKB/Swiss-Prot Length:293
Alignment length:263
39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289
CASP6_HUMAN 30 MFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTKKLHFFPKS 292
SCOP domains d3s8ec_ C: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ................eeeeee....hhhhh.....hhhhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhh.......eeeeee......eee....eeehhhhhhh.....hhhhh...eeeeee..--------------------------------..........eeeee....-------....hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh....-----........eeee............ Sec.struct. author
SAPs(SNPs) -----K-------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -------------CASPASE_P20 PDB: C:43-163 UniProt: 43-167 ----------------------------CASPASE_P10 PDB: C:196-290 UniProt: 196-290 -- PROSITE (1)
PROSITE (2) ------------------------------------------------------------------------------CASPASE_HIS -------------------------------CASPASE_CYS ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.4b PDB: C:30-77 UniProt: 28-77 -------------------------Exon 1.6c PDB: C:103-161 UniProt: 103-161 Exon 1.7c PDB: C:162-214 (gaps) UniProt: 162-215 ----------------------------------------------------------------------------- Transcript 1 (1)
Transcript 1 (2) -----------------------------------------------Exon 1.5b PDB: C:77-103 ---------------------------------------------------------------------------------------------------------------Exon 1.8d PDB: C:222-292 (gaps) UniProt: 215-293 [INCOMPLETE] Transcript 1 (2)
3s8e C 30 MFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC--------------------------------SVYTLPAGADFLMCYSVAE-------TVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVDQRRVDF-----AIGKKQVPCFASMLTKKLHFFPKS 292
39 49 59 69 79 89 99 109 119 129 139 149 159 | - - - |199 209 | - | 229 239 249 259 | 269 279 289
163 196 214 222 263 269
Chain D from PDB Type:PROTEIN Length:221
aligned with CASP6_HUMAN | P55212 from UniProtKB/Swiss-Prot Length:293
Alignment length:263
38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228 238 248 258 268 278 288
CASP6_HUMAN 29 EMFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTKKLHFFPK 291
SCOP domains d3s8ed_ D: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .................eeeeee....hhhhh.....hhhhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhh.......eeeeee......eee....eeehhhhhhhhh...hhhhh...eeeeee..---------------------------------.........eeeee....---........hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..------.........eeee........... Sec.struct. author
SAPs(SNPs) ------K-------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) --------------CASPASE_P20 PDB: D:43-163 UniProt: 43-167 ----------------------------CASPASE_P10 PDB: D:197-290 UniProt: 196-290 - PROSITE (1)
PROSITE (2) -------------------------------------------------------------------------------CASPASE_HIS -------------------------------CASPASE_CYS ------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
Transcript 1 (1) Exon 1.4b PDB: D:29-77 UniProt: 28-77 -------------------------Exon 1.6c PDB: D:103-161 UniProt: 103-161 Exon 1.7c PDB: D:162-214 (gaps) UniProt: 162-215 ---------------------------------------------------------------------------- Transcript 1 (1)
Transcript 1 (2) ------------------------------------------------Exon 1.5b PDB: D:77-103 ---------------------------------------------------------------------------------------------------------------Exon 1.8d PDB: D:218-291 (gaps) UniProt: 215-293 [INCOMPLETE] Transcript 1 (2)
3s8e D 29 EMFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC---------------------------------VYTLPAGADFLMCYSVAE---SHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVDQRRV------SAIGKKQVPCFASMLTKKLHFFPK 291
38 48 58 68 78 88 98 108 118 128 138 148 158 | - - - 198 208 | 218 228 238 248 258 | 268 278 288
163 197 214 218 261 268
Chain E from PDB Type:PROTEIN Length:219
aligned with CASP6_HUMAN | P55212 from UniProtKB/Swiss-Prot Length:293
Alignment length:263
39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289
CASP6_HUMAN 30 MFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTKKLHFFPKS 292
SCOP domains d3s8ee_ E: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ................eeeeee....hhhhh.....hhhhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhh.......eeeeee......eee....eeehhhhhhhhh...hhhhh...eeeeee..--------------------------------..ee......eeeeee....------....hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..------.........eeee............ Sec.struct. author
SAPs(SNPs) -----K-------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -------------CASPASE_P20 PDB: E:43-163 UniProt: 43-167 ----------------------------CASPASE_P10 PDB: E:196-290 UniProt: 196-290 -- PROSITE (1)
PROSITE (2) ------------------------------------------------------------------------------CASPASE_HIS -------------------------------CASPASE_CYS ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.4b PDB: E:30-77 UniProt: 28-77 -------------------------Exon 1.6c PDB: E:103-161 UniProt: 103-161 Exon 1.7c PDB: E:162-215 (gaps) UniProt: 162-215 ----------------------------------------------------------------------------- Transcript 1 (1)
Transcript 1 (2) -----------------------------------------------Exon 1.5b PDB: E:77-103 ---------------------------------------------------------------------------------------------------------------Exon 1.8d PDB: E:215-292 (gaps) UniProt: 215-293 [INCOMPLETE] Transcript 1 (2)
3s8e E 30 MFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC--------------------------------SVYTLPAGADFLMCYSVAEG------TVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVDQRRV------SAIGKKQVPCFASMLTKKLHFFPKS 292
39 49 59 69 79 89 99 109 119 129 139 149 159 | - - - |199 209 | - | 229 239 249 259 | 269 279 289
163 196 215 222 261 268
Chain F from PDB Type:PROTEIN Length:222
aligned with CASP6_HUMAN | P55212 from UniProtKB/Swiss-Prot Length:293
Alignment length:263
39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289
CASP6_HUMAN 30 MFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTKKLHFFPKS 292
SCOP domains d3s8ef_ F: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ................eeeeee....hhhhh.....hhhhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhh.......eeeeee......eee....eeehhhhhhhhh...hhhhh...eeeeee..--------------------------------.ee.......eeeeee...-------....hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh.....--..........eeee............ Sec.struct. author
SAPs(SNPs) -----K-------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -------------CASPASE_P20 PDB: F:43-163 UniProt: 43-167 ----------------------------CASPASE_P10 PDB: F:196-290 UniProt: 196-290 -- PROSITE (1)
PROSITE (2) ------------------------------------------------------------------------------CASPASE_HIS -------------------------------CASPASE_CYS ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.4b PDB: F:30-77 UniProt: 28-77 -------------------------Exon 1.6c PDB: F:103-161 UniProt: 103-161 Exon 1.7c PDB: F:162-214 (gaps) UniProt: 162-215 ----------------------------------------------------------------------------- Transcript 1 (1)
Transcript 1 (2) -----------------------------------------------Exon 1.5b PDB: F:77-103 ---------------------------------------------------------------------------------------------------------------Exon 1.8d PDB: F:222-292 (gaps) UniProt: 215-293 [INCOMPLETE] Transcript 1 (2)
3s8e F 30 MFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC--------------------------------SVYTLPAGADFLMCYSVAE-------TVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVDQRRVDFC--PSAIGKKQVPCFASMLTKKLHFFPKS 292
39 49 59 69 79 89 99 109 119 129 139 149 159 | - - - |199 209 | - | 229 239 249 259 | 269 279 289
163 196 214 222 264 |
267
Chain G from PDB Type:PROTEIN Length:216
aligned with CASP6_HUMAN | P55212 from UniProtKB/Swiss-Prot Length:293
Alignment length:264
38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228 238 248 258 268 278 288
CASP6_HUMAN 29 EMFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTKKLHFFPKS 292
SCOP domains d3s8eg_ G: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .................eeeeee....hhhhh.....hhhhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhh.......eeeeee......eee....eeehhhhhhhhh...hhhhh...eeeeee..---------------------------------.........eeeee...-------.....hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..--------.......eeee............ Sec.struct. author
SAPs(SNPs) ------K-------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) --------------CASPASE_P20 PDB: G:43-163 UniProt: 43-167 ----------------------------CASPASE_P10 PDB: G:197-290 UniProt: 196-290 -- PROSITE (1)
PROSITE (2) -------------------------------------------------------------------------------CASPASE_HIS -------------------------------CASPASE_CYS ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.4b PDB: G:29-77 UniProt: 28-77 -------------------------Exon 1.6c PDB: G:103-161 UniProt: 103-161 Exon 1.7c PDB: G:162-213 (gaps) UniProt: 162-215 ----------------------------------------------------------------------------- Transcript 1 (1)
Transcript 1 (2) ------------------------------------------------Exon 1.5b PDB: G:77-103 ---------------------------------------------------------------------------------------------------------------Exon 1.8d PDB: G:221-292 (gaps) UniProt: 215-293 [INCOMPLETE] Transcript 1 (2)
3s8e G 29 EMFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC---------------------------------VYTLPAGADFLMCYSVA-------ETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVDQRRV--------IGKKQVPCFASMLTKKLHFFPKS 292
38 48 58 68 78 88 98 108 118 128 138 148 158 | - - - 198 208 | - | 228 238 248 258 | - | 278 288
163 197 213 221 261 270
Chain H from PDB Type:PROTEIN Length:217
aligned with CASP6_HUMAN | P55212 from UniProtKB/Swiss-Prot Length:293
Alignment length:263
39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289
CASP6_HUMAN 30 MFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTKKLHFFPKS 292
SCOP domains d3s8eh_ H: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ................eeeeee....hhhhh.....hhhhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhh.......eeeeee......eee....eeehhhhhhhhh...hhhhh...eeeeee..---------------------------------.........eeeee..------.......hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..-------........eeee............ Sec.struct. author
SAPs(SNPs) -----K-------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -------------CASPASE_P20 PDB: H:43-163 UniProt: 43-167 ----------------------------CASPASE_P10 PDB: H:197-290 UniProt: 196-290 -- PROSITE (1)
PROSITE (2) ------------------------------------------------------------------------------CASPASE_HIS -------------------------------CASPASE_CYS ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.4b PDB: H:30-77 UniProt: 28-77 -------------------------Exon 1.6c PDB: H:103-161 UniProt: 103-161 Exon 1.7c PDB: H:162-212 (gaps) UniProt: 162-215 ----------------------------------------------------------------------------- Transcript 1 (1)
Transcript 1 (2) -----------------------------------------------Exon 1.5b PDB: H:77-103 ---------------------------------------------------------------------------------------------------------------Exon 1.8d PDB: H:219-292 (gaps) UniProt: 215-293 [INCOMPLETE] Transcript 1 (2)
3s8e H 30 MFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC---------------------------------VYTLPAGADFLMCYSV------HRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVDQRRV-------AIGKKQVPCFASMLTKKLHFFPKS 292
39 49 59 69 79 89 99 109 119 129 139 149 159 | - - - 199 209 | 219 229 239 249 259 | 269 279 289
163 197 212 219 261 269
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |