Chain A from PDB Type:PROTEIN Length:134
aligned with CASP6_HUMAN | P55212 from UniProtKB/Swiss-Prot Length:293
Alignment length:134
40 50 60 70 80 90 100 110 120 130 140 150 160
CASP6_HUMAN 31 FDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACR 164
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...............eeeeee........hhhhhhhhhhhhhhhhhhhhhh..eeeeee...hhhhhhhhhhhhh........eeeeee.....hhhhhhhhhhhhhhhhhh.....hhhhh...eeeeee... Sec.struct. author
SAPs(SNPs) ----K-------------------------------------------------------------------------T------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ------------CASPASE_P20 PDB: A:43-164 UniProt: 43-167 PROSITE (1)
PROSITE (2) -----------------------------------------------------------------------------CASPASE_HIS -------------------------------CASPASE_CYS PROSITE (2)
Transcript 1 (1) Exon 1.4b PDB: A:31-77 UniProt: 28-77 -------------------------Exon 1.6c PDB: A:103-161 UniProt: 103-161 1.7 Transcript 1 (1)
Transcript 1 (2) ----------------------------------------------Exon 1.5b PDB: A:77-103 ------------------------------------------------------------- Transcript 1 (2)
3qnw A 31 FDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACR 164
40 50 60 70 80 90 100 110 120 130 140 150 160
Chain B from PDB Type:PROTEIN Length:93
aligned with CASP6_HUMAN | P55212 from UniProtKB/Swiss-Prot Length:293
Alignment length:93
209 219 229 239 249 259 269 279 289
CASP6_HUMAN 200 LPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTKKLHFFPKS 292
SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeeee...............hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh.................eeee............ Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) --------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) --------------------------------------------------------------------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.7c ----------------------------------------------------------------------------- Transcript 1 (1)
Transcript 1 (2) ---------------Exon 1.8d PDB: B:215-292 UniProt: 215-293 [INCOMPLETE] Transcript 1 (2)
3qnw B 200 LPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTKKLHFFPKS 292
209 219 229 239 249 259 269 279 289
Chain C from PDB Type:PROTEIN Length:133
aligned with CASP6_HUMAN | P55212 from UniProtKB/Swiss-Prot Length:293
Alignment length:133
40 50 60 70 80 90 100 110 120 130 140 150 160
CASP6_HUMAN 31 FDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC 163
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...............eeeeeee.......hhhhhhhhhhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhh.......eeeeeee....hhhhhhhhhhhhhhhhhh.....hhhhh...eeeeee.. Sec.struct. author
SAPs(SNPs) ----K-------------------------------------------------------------------------T------------------------------------------------------ SAPs(SNPs)
PROSITE (1) ------------CASPASE_P20 PDB: C:43-163 UniProt: 43-167 PROSITE (1)
PROSITE (2) -----------------------------------------------------------------------------CASPASE_HIS -------------------------------CASPASE_CY PROSITE (2)
Transcript 1 (1) Exon 1.4b PDB: C:31-77 UniProt: 28-77 -------------------------Exon 1.6c PDB: C:103-161 UniProt: 103-161 1. Transcript 1 (1)
Transcript 1 (2) ----------------------------------------------Exon 1.5b PDB: C:77-103 ------------------------------------------------------------ Transcript 1 (2)
3qnw C 31 FDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC 163
40 50 60 70 80 90 100 110 120 130 140 150 160
Chain D from PDB Type:PROTEIN Length:92
aligned with CASP6_HUMAN | P55212 from UniProtKB/Swiss-Prot Length:293
Alignment length:92
209 219 229 239 249 259 269 279 289
CASP6_HUMAN 200 LPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTKKLHFFPK 291
SCOP domains -------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeeee...............hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.......hhhhh......eeee........... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) -------------------------------------------------------------------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.7c ---------------------------------------------------------------------------- Transcript 1 (1)
Transcript 1 (2) ---------------Exon 1.8d PDB: D:215-291 UniProt: 215-293 [INCOMPLETE] Transcript 1 (2)
3qnw D 200 LPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTKKLHFFPK 291
209 219 229 239 249 259 269 279 289
Chain E from PDB Type:PROTEIN Length:133
aligned with CASP6_HUMAN | P55212 from UniProtKB/Swiss-Prot Length:293
Alignment length:133
40 50 60 70 80 90 100 110 120 130 140 150 160
CASP6_HUMAN 31 FDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC 163
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...............eeeeeee.......hhhhhhhhhhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhh........eeeeeee....hhhhhhhhhhhhhhhhhh.....hhhhh...eeeeee.. Sec.struct. author
SAPs(SNPs) ----K-------------------------------------------------------------------------T------------------------------------------------------ SAPs(SNPs)
PROSITE (1) ------------CASPASE_P20 PDB: E:43-163 UniProt: 43-167 PROSITE (1)
PROSITE (2) -----------------------------------------------------------------------------CASPASE_HIS -------------------------------CASPASE_CY PROSITE (2)
Transcript 1 (1) Exon 1.4b PDB: E:31-77 UniProt: 28-77 -------------------------Exon 1.6c PDB: E:103-161 UniProt: 103-161 1. Transcript 1 (1)
Transcript 1 (2) ----------------------------------------------Exon 1.5b PDB: E:77-103 ------------------------------------------------------------ Transcript 1 (2)
3qnw E 31 FDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC 163
40 50 60 70 80 90 100 110 120 130 140 150 160
Chain F from PDB Type:PROTEIN Length:86
aligned with CASP6_HUMAN | P55212 from UniProtKB/Swiss-Prot Length:293
Alignment length:91
211 221 231 241 251 261 271 281 291
CASP6_HUMAN 202 AGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTKKLHFFPKS 292
SCOP domains ------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeeee...............hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh...-----..........eeee............ Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ------------------------------------------------------------------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.7c ----------------------------------------------------------------------------- Transcript 1 (1)
Transcript 1 (2) -------------Exon 1.8d PDB: F:215-292 (gaps) UniProt: 215-293 [INCOMPLETE] Transcript 1 (2)
3qnw F 202 AGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRV-----PSAIGKKQVPCFASMLTKKLHFFPKS 292
211 221 231 241 251 261 | 271 281 291
261 267
Chain G from PDB Type:PROTEIN Length:133
aligned with CASP6_HUMAN | P55212 from UniProtKB/Swiss-Prot Length:293
Alignment length:133
40 50 60 70 80 90 100 110 120 130 140 150 160
CASP6_HUMAN 31 FDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC 163
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...............eeeeee........hhhhhhhhhhhhhhhhhhhhhh..eeeeee...hhhhhhhhhhhhh........eeeeee.....hhhhhhhhhhhhhhhhhhhhh..hhhhh...eeeeee.. Sec.struct. author
SAPs(SNPs) ----K-------------------------------------------------------------------------T------------------------------------------------------ SAPs(SNPs)
PROSITE (1) ------------CASPASE_P20 PDB: G:43-163 UniProt: 43-167 PROSITE (1)
PROSITE (2) -----------------------------------------------------------------------------CASPASE_HIS -------------------------------CASPASE_CY PROSITE (2)
Transcript 1 (1) Exon 1.4b PDB: G:31-77 UniProt: 28-77 -------------------------Exon 1.6c PDB: G:103-161 UniProt: 103-161 1. Transcript 1 (1)
Transcript 1 (2) ----------------------------------------------Exon 1.5b PDB: G:77-103 ------------------------------------------------------------ Transcript 1 (2)
3qnw G 31 FDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC 163
40 50 60 70 80 90 100 110 120 130 140 150 160
Chain H from PDB Type:PROTEIN Length:84
aligned with CASP6_HUMAN | P55212 from UniProtKB/Swiss-Prot Length:293
Alignment length:90
211 221 231 241 251 261 271 281 291
CASP6_HUMAN 202 AGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTKKLHFFPK 291
SCOP domains ------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....eeeee...............hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh....------........eeee........... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE (1) ------------------------------------------------------------------------------------------ PROSITE (1)
PROSITE (2) ------------------------------------------------------------------------------------------ PROSITE (2)
Transcript 1 (1) Exon 1.7c ---------------------------------------------------------------------------- Transcript 1 (1)
Transcript 1 (2) -------------Exon 1.8d PDB: H:215-291 (gaps) UniProt: 215-293 [INCOMPLETE] Transcript 1 (2)
3qnw H 202 AGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVD------AIGKKQVPCFASMLTKKLHFFPK 291
211 221 231 241 251 261| 271 281 291
262 269
Chain X from PDB Type:PROTEIN Length:5
SCOP domains ----- SCOP domains
CATH domains ----- CATH domains
Pfam domains ----- Pfam domains
Sec.struct. author ..... Sec.struct. author
SAPs(SNPs) ----- SAPs(SNPs)
PROSITE ----- PROSITE
Transcript ----- Transcript
3qnw X 1 xVADx 5
| |
1-PHQ
5-CF0
Chain Y from PDB Type:PROTEIN Length:5
SCOP domains ----- SCOP domains
CATH domains ----- CATH domains
Pfam domains ----- Pfam domains
Sec.struct. author ..... Sec.struct. author
SAPs(SNPs) ----- SAPs(SNPs)
PROSITE ----- PROSITE
Transcript ----- Transcript
3qnw Y 1 xVADx 5
| |
| |
1-PHQ
5-CF0
Chain Z from PDB Type:PROTEIN Length:5
SCOP domains ----- SCOP domains
CATH domains ----- CATH domains
Pfam domains ----- Pfam domains
Sec.struct. author ..... Sec.struct. author
SAPs(SNPs) ----- SAPs(SNPs)
PROSITE ----- PROSITE
Transcript ----- Transcript
3qnw Z 1 xVADx 5
| |
| |
1-PHQ
5-CF0
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |