Chain A from PDB Type:PROTEIN Length:381
aligned with DEGP_ECOLI | P0C0V0 from UniProtKB/Swiss-Prot Length:474
Alignment length:440
44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 404 414 424 434 444 454 464 474
DEGP_ECOLI 35 AQQMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ 474
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhh..eeeeeee-------------------------------------------------....eeeeeeeee....eeeeehhhhh...eeeee.....eeeeeeeeee....eeeeee............hhhhh....eeeeeehhhhh..eeeeeeeeeeee..........eeee...........eee.....eeeeeeeee.........eeeeehhhhhhhhhhhhhh.........eeeee.hhhhhhhh.......eeeeee...hhhhhhh.....eeeee..ee..hhhhhhhhhhh.....eeeeeeee..eeeeeeee....----------.eee..eee........eeeee................ee.ee..ee..hhhhhhhhhh.....eeeee......eeeee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDZ PDB: A:254-345 UniProt: 280-371 -----PDZ PDB: A:351-440 UniProt: 377-466 -------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3otp A 9 AQQMPSLAPMLEKVMPSVVSINVE-------------------------------------------------QKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQS----------FNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ 448
18 28 | - - - - - | 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 |- 368 378 388 398 408 418 428 438 448
32 82 357 368
Chain B from PDB Type:PROTEIN Length:392
aligned with DEGP_ECOLI | P0C0V0 from UniProtKB/Swiss-Prot Length:474
Alignment length:438
46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326 336 346 356 366 376 386 396 406 416 426 436 446 456 466
DEGP_ECOLI 37 QMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ 474
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....hhhhhhhhh..eeeeeeee..----------------------------------------------..eeeeeeeeeee....eeeeehhhhh.eeeeeee.....eeeeeeeeee....eeeeee............hhhhh....eeeeeehhhhh..eeeeeeeeeeee..........eeee...........eee.....eeeeeeeee.........eeeeehhhhhhhhhhhhhhh....ee..eeeee.hhhhhhhh.......eeeeee...hhhhhhh.....eeeee..ee..hhhhhhhhhhhh....eeeeeee....eeeeeee.ee.....eehhhhhh....eeeee......eeeeee.....hhhhh.....eeeee..ee..hhhhhhhhhh.....eeeeeee..ee..eee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDZ PDB: B:254-345 UniProt: 280-371 -----PDZ PDB: B:351-440 UniProt: 377-466 -------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3otp B 11 QMPSLAPMLEKVMPSVVSINVEGST----------------------------------------------QKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ 448
20 30 | - - - - - | 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440
35 82
Chain C from PDB Type:PROTEIN Length:382
aligned with DEGP_ECOLI | P0C0V0 from UniProtKB/Swiss-Prot Length:474
Alignment length:438
46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326 336 346 356 366 376 386 396 406 416 426 436 446 456 466
DEGP_ECOLI 37 QMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ 474
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....hhhhhhhhh..eeeeeeee..----------------------------------------------..eeeeeeeeeee....eeeeehhhhh.eeeeeee.....eeeeeeeeee....eeeeee............hhhhh....eeeeeehhhhh..eeeeeeeeeeee..........eeee...........eee.....eeeeeeeee.........eeeeehhhhhhhhhhhhhhh........eeeee.hhhhhhhh.......eeeeee...hhhhhhh.....eeeee..ee..hhhhhhhhhhhh....eeeeeeee..eeeeeeee....----------.eee..eeeee......eeeee....hhhhhh......ee.ee..ee..hhhhhhhhhh.....eeee.........eee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDZ PDB: C:254-345 UniProt: 280-371 -----PDZ PDB: C:351-440 UniProt: 377-466 -------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3otp C 11 QMPSLAPMLEKVMPSVVSINVEGST----------------------------------------------QKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQS----------FNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ 448
20 30 | - - - - - | 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 | - 370 380 390 400 410 420 430 440
35 82 357 368
Chain D from PDB Type:PROTEIN Length:388
aligned with DEGP_ECOLI | P0C0V0 from UniProtKB/Swiss-Prot Length:474
Alignment length:438
46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326 336 346 356 366 376 386 396 406 416 426 436 446 456 466
DEGP_ECOLI 37 QMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ 474
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....hhhhhhhhh..eeeeeeee..----------------------------------------------..eeeeeeeeeee....eeeeehhhhh.eeeeeee.....eeeeeeeeee....eeeeee............hhhhh....eeeeeehhhhh..eeeeeeeeeeee..........eeee...........eee.....eeeeeeeee.........eeeeehhhhhhhhhhhhhhh........eeeee.hhhhhhhh.......eeeeee...hhhhhhh.....eeeee..ee..hhhhhhhhhh......eeeeeeee..eeeeeeee....----..hhhhhh....eeeee......eeeeee.....hhhhh.....ee.ee..ee..hhhhhhhhhh.....eeee.ee..ee..eee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDZ PDB: D:254-345 UniProt: 280-371 -----PDZ PDB: D:351-440 UniProt: 377-466 -------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3otp D 11 QMPSLAPMLEKVMPSVVSINVEGST----------------------------------------------QKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQS----VDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ 448
20 30 | - - - - - | 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 | - | 370 380 390 400 410 420 430 440
35 82 357 362
Chain E from PDB Type:PROTEIN Length:388
aligned with DEGP_ECOLI | P0C0V0 from UniProtKB/Swiss-Prot Length:474
Alignment length:438
46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326 336 346 356 366 376 386 396 406 416 426 436 446 456 466
DEGP_ECOLI 37 QMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ 474
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....hhhhhhhhh..eeeeeeee..----------------------------------------------..eeeeeeeeeee....eeeeehhhhh.eeeeeee.....eeeeeeeeee....eeeeee............hhhhh....eeeeeehhhhh..eeeeeeeeeeee..........eeee...........eee.....eeeeeeeee.........eeeeehhhhhhhhhhhhhhh....ee..eeeee.hhhhhhhh.......eeeeee...hhhhhhh.....eeeee..ee..hhhhhhhhhh......eeeeeeee..eeeeeeee.ee...----hhhhhh....eeeee......eeeeee...............ee.ee..ee..hhhhhhhhhh.....eeee.ee..ee..eee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDZ PDB: E:254-345 UniProt: 280-371 -----PDZ PDB: E:351-440 UniProt: 377-466 -------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3otp E 11 QMPSLAPMLEKVMPSVVSINVEGST----------------------------------------------QKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQ----SSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ 448
20 30 | - - - - - | 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 |- | 370 380 390 400 410 420 430 440
35 82 359 364
Chain F from PDB Type:PROTEIN Length:378
aligned with DEGP_ECOLI | P0C0V0 from UniProtKB/Swiss-Prot Length:474
Alignment length:438
46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326 336 346 356 366 376 386 396 406 416 426 436 446 456 466
DEGP_ECOLI 37 QMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ 474
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains (1) ---------------------- ------Trypsin_2-3otpF13 F:88-224 ------------------------------------------------------------------------------------------------------------------------------------- PDZ-3otpF01 F:368-437 ----------- Pfam domains (1)
Pfam domains (2) ---------------------- ------Trypsin_2-3otpF14 F:88-224 ------------------------------------------------------------------------------------------------------------------------------------- PDZ-3otpF02 F:368-437 ----------- Pfam domains (2)
Pfam domains (3) ---------------------- ------Trypsin_2-3otpF15 F:88-224 ------------------------------------------------------------------------------------------------------------------------------------- PDZ-3otpF03 F:368-437 ----------- Pfam domains (3)
Pfam domains (4) ---------------------- ------Trypsin_2-3otpF16 F:88-224 ------------------------------------------------------------------------------------------------------------------------------------- PDZ-3otpF04 F:368-437 ----------- Pfam domains (4)
Pfam domains (5) ---------------------- ------Trypsin_2-3otpF17 F:88-224 ------------------------------------------------------------------------------------------------------------------------------------- PDZ-3otpF05 F:368-437 ----------- Pfam domains (5)
Pfam domains (6) ---------------------- ------Trypsin_2-3otpF18 F:88-224 ------------------------------------------------------------------------------------------------------------------------------------- PDZ-3otpF06 F:368-437 ----------- Pfam domains (6)
Pfam domains (7) ---------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PDZ-3otpF07 F:368-437 ----------- Pfam domains (7)
Pfam domains (8) ---------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PDZ-3otpF08 F:368-437 ----------- Pfam domains (8)
Pfam domains (9) ---------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PDZ-3otpF09 F:368-437 ----------- Pfam domains (9)
Pfam domains (10) ---------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PDZ-3otpF10 F:368-437 ----------- Pfam domains (10)
Pfam domains (11) ---------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PDZ-3otpF11 F:368-437 ----------- Pfam domains (11)
Pfam domains (12) ---------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PDZ-3otpF12 F:368-437 ----------- Pfam domains (12)
Sec.struct. author ....hhhhhhhhh..eeeeeee-------------------------------------------------....eeeeeeeee....eeeeehhhhh...eeeee.....eeeeeeeeee....eeeeee............hhhhh....eeeeeehhhhh..eeeeeeeeeeee..........eeee...........eee.....eeeeeeeee.........eeeeehhhhhhhhhhhhhh.....ee..eeeee.hhhhhhhh.......eeeeee...hhhhhhh.....eeeee..ee..hhhhhhhhhhh.....eeeeeeee..eeeeeeee.ee.----------.eee..eee........eeeee..........-.....ee.ee..ee..hhhhhhhhhh.....eeee.........eee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDZ PDB: F:254-345 UniProt: 280-371 -----PDZ PDB: F:351-440 UniProt: 377-466 -------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3otp F 11 QMPSLAPMLEKVMPSVVSINVE-------------------------------------------------QKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQS----------FNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQI-LKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ 448
20 30 | - - - - - | 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 | - 370 380 390 |-| 410 420 430 440
32 82 357 368 399 |
401
Chain G from PDB Type:PROTEIN Length:10
aligned with B8YK79_CHICK | B8YK79 from UniProtKB/TrEMBL Length:147
Alignment length:31
55 65 75
B8YK79_CHICK 46 WVCAAKFESNFNTQATNRNTDGSTDYGILQI 76
SCOP domains ------------------------------- SCOP domains
CATH domains ------------------------------- CATH domains
Pfam domains ------------------------------- Pfam domains
Sec.struct. author .eee.---------------------..ee. Sec.struct. author
SAPs(SNPs) ------------------------------- SAPs(SNPs)
PROSITE ------------------------------- PROSITE
Transcript ------------------------------- Transcript
3otp G 28 WVSAA---------------------GILQI 58
| - - | 57
32 54
Chain G from PDB Type:PROTEIN Length:10
aligned with LYSC_CHICK | P00698 from UniProtKB/Swiss-Prot Length:147
Alignment length:31
55 65 75
LYSC_CHICK 46 WVCAAKFESNFNTQATNRNTDGSTDYGILQI 76
SCOP domains ------------------------------- SCOP domains
CATH domains ------------------------------- CATH domains
Pfam domains ------------------------------- Pfam domains
Sec.struct. author .eee.---------------------..ee. Sec.struct. author
SAPs(SNPs) ------------------------------- SAPs(SNPs)
PROSITE ------------------------------- PROSITE
Transcript 1 (1) 1------------------------------ Transcript 1 (1)
Transcript 1 (2) Exon 1.2 PDB: G:28-58 (gaps) Transcript 1 (2)
3otp G 28 WVSAA---------------------GILQI 58
| - - | 57
32 54
Chain H from PDB Type:PROTEIN Length:10
aligned with B8YK79_CHICK | B8YK79 from UniProtKB/TrEMBL Length:147
Alignment length:31
55 65 75
B8YK79_CHICK 46 WVCAAKFESNFNTQATNRNTDGSTDYGILQI 76
SCOP domains ------------------------------- SCOP domains
CATH domains ------------------------------- CATH domains
Pfam domains ------------------------------- Pfam domains
Sec.struct. author .eee.---------------------..ee. Sec.struct. author
SAPs(SNPs) ------------------------------- SAPs(SNPs)
PROSITE ------------------------------- PROSITE
Transcript ------------------------------- Transcript
3otp H 28 WVSAA---------------------GILQI 58
| - - | 57
32 54
Chain H from PDB Type:PROTEIN Length:10
aligned with LYSC_CHICK | P00698 from UniProtKB/Swiss-Prot Length:147
Alignment length:31
55 65 75
LYSC_CHICK 46 WVCAAKFESNFNTQATNRNTDGSTDYGILQI 76
SCOP domains ------------------------------- SCOP domains
CATH domains ------------------------------- CATH domains
Pfam domains ------------------------------- Pfam domains
Sec.struct. author .eee.---------------------..ee. Sec.struct. author
SAPs(SNPs) ------------------------------- SAPs(SNPs)
PROSITE ------------------------------- PROSITE
Transcript 1 (1) 1------------------------------ Transcript 1 (1)
Transcript 1 (2) Exon 1.2 PDB: H:28-58 (gaps) Transcript 1 (2)
3otp H 28 WVSAA---------------------GILQI 58
| - - | 57
32 54
Chain I from PDB Type:PROTEIN Length:16
aligned with B8YK79_CHICK | B8YK79 from UniProtKB/TrEMBL Length:147
Alignment length:31
55 65 75
B8YK79_CHICK 46 WVCAAKFESNFNTQATNRNTDGSTDYGILQI 76
SCOP domains ------------------------------- SCOP domains
CATH domains ------------------------------- CATH domains
Pfam domains ------------------------------- Pfam domains
Sec.struct. author .eee.---------------........ee. Sec.struct. author
SAPs(SNPs) ------------------------------- SAPs(SNPs)
PROSITE ------------------------------- PROSITE
Transcript ------------------------------- Transcript
3otp I 28 WVSAA---------------DGSTDYGILQI 58
| - -| 57
32 48
Chain I from PDB Type:PROTEIN Length:16
aligned with LYSC_CHICK | P00698 from UniProtKB/Swiss-Prot Length:147
Alignment length:31
55 65 75
LYSC_CHICK 46 WVCAAKFESNFNTQATNRNTDGSTDYGILQI 76
SCOP domains ------------------------------- SCOP domains
CATH domains ------------------------------- CATH domains
Pfam domains ------------------------------- Pfam domains
Sec.struct. author .eee.---------------........ee. Sec.struct. author
SAPs(SNPs) ------------------------------- SAPs(SNPs)
PROSITE ------------------------------- PROSITE
Transcript 1 (1) 1------------------------------ Transcript 1 (1)
Transcript 1 (2) Exon 1.2 PDB: I:28-58 (gaps) Transcript 1 (2)
3otp I 28 WVSAA---------------DGSTDYGILQI 58
| - -| 57
32 48
Chain J from PDB Type:PROTEIN Length:10
aligned with B8YK79_CHICK | B8YK79 from UniProtKB/TrEMBL Length:147
Alignment length:31
55 65 75
B8YK79_CHICK 46 WVCAAKFESNFNTQATNRNTDGSTDYGILQI 76
SCOP domains ------------------------------- SCOP domains
CATH domains ------------------------------- CATH domains
Pfam domains ------------------------------- Pfam domains
Sec.struct. author .eee.---------------------..ee. Sec.struct. author
SAPs(SNPs) ------------------------------- SAPs(SNPs)
PROSITE ------------------------------- PROSITE
Transcript ------------------------------- Transcript
3otp J 28 WVSAA---------------------GILQI 58
| - - | 57
32 54
Chain J from PDB Type:PROTEIN Length:10
aligned with LYSC_CHICK | P00698 from UniProtKB/Swiss-Prot Length:147
Alignment length:31
55 65 75
LYSC_CHICK 46 WVCAAKFESNFNTQATNRNTDGSTDYGILQI 76
SCOP domains ------------------------------- SCOP domains
CATH domains ------------------------------- CATH domains
Pfam domains ------------------------------- Pfam domains
Sec.struct. author .eee.---------------------..ee. Sec.struct. author
SAPs(SNPs) ------------------------------- SAPs(SNPs)
PROSITE ------------------------------- PROSITE
Transcript 1 (1) 1------------------------------ Transcript 1 (1)
Transcript 1 (2) Exon 1.2 PDB: J:28-58 (gaps) Transcript 1 (2)
3otp J 28 WVSAA---------------------GILQI 58
| - - | 57
32 54
Chain K from PDB Type:PROTEIN Length:10
aligned with B8YK79_CHICK | B8YK79 from UniProtKB/TrEMBL Length:147
Alignment length:31
55 65 75
B8YK79_CHICK 46 WVCAAKFESNFNTQATNRNTDGSTDYGILQI 76
SCOP domains ------------------------------- SCOP domains
CATH domains ------------------------------- CATH domains
Pfam domains ------------------------------- Pfam domains
Sec.struct. author .eee.---------------------..ee. Sec.struct. author
SAPs(SNPs) ------------------------------- SAPs(SNPs)
PROSITE ------------------------------- PROSITE
Transcript ------------------------------- Transcript
3otp K 28 WVSAA---------------------GILQI 58
| - - | 57
32 54
Chain K from PDB Type:PROTEIN Length:10
aligned with LYSC_CHICK | P00698 from UniProtKB/Swiss-Prot Length:147
Alignment length:31
55 65 75
LYSC_CHICK 46 WVCAAKFESNFNTQATNRNTDGSTDYGILQI 76
SCOP domains ------------------------------- SCOP domains
CATH domains ------------------------------- CATH domains
Pfam domains ------------------------------- Pfam domains
Sec.struct. author .eee.---------------------..ee. Sec.struct. author
SAPs(SNPs) ------------------------------- SAPs(SNPs)
PROSITE ------------------------------- PROSITE
Transcript 1 (1) 1------------------------------ Transcript 1 (1)
Transcript 1 (2) Exon 1.2 PDB: K:28-58 (gaps) Transcript 1 (2)
3otp K 28 WVSAA---------------------GILQI 58
| - - | 57
32 54
Chain L from PDB Type:PROTEIN Length:10
aligned with B8YK79_CHICK | B8YK79 from UniProtKB/TrEMBL Length:147
Alignment length:31
55 65 75
B8YK79_CHICK 46 WVCAAKFESNFNTQATNRNTDGSTDYGILQI 76
SCOP domains ------------------------------- SCOP domains
CATH domains ------------------------------- CATH domains
Pfam domains (1) Lys-3 otpL0 Pfam domains (1)
Pfam domains (2) Lys-3 otpL0 Pfam domains (2)
Pfam domains (3) Lys-3 otpL0 Pfam domains (3)
Pfam domains (4) Lys-3 otpL0 Pfam domains (4)
Pfam domains (5) Lys-3 otpL0 Pfam domains (5)
Pfam domains (6) Lys-3 otpL0 Pfam domains (6)
Sec.struct. author .eee.---------------------..ee. Sec.struct. author
SAPs(SNPs) ------------------------------- SAPs(SNPs)
PROSITE ------------------------------- PROSITE
Transcript ------------------------------- Transcript
3otp L 28 WVSAA---------------------GILQI 58
| - - | 57
32 54
Chain L from PDB Type:PROTEIN Length:10
aligned with LYSC_CHICK | P00698 from UniProtKB/Swiss-Prot Length:147
Alignment length:31
55 65 75
LYSC_CHICK 46 WVCAAKFESNFNTQATNRNTDGSTDYGILQI 76
SCOP domains ------------------------------- SCOP domains
CATH domains ------------------------------- CATH domains
Pfam domains (1) Lys-3 otpL0 Pfam domains (1)
Pfam domains (2) Lys-3 otpL0 Pfam domains (2)
Pfam domains (3) Lys-3 otpL0 Pfam domains (3)
Pfam domains (4) Lys-3 otpL0 Pfam domains (4)
Pfam domains (5) Lys-3 otpL0 Pfam domains (5)
Pfam domains (6) Lys-3 otpL0 Pfam domains (6)
Sec.struct. author .eee.---------------------..ee. Sec.struct. author
SAPs(SNPs) ------------------------------- SAPs(SNPs)
PROSITE ------------------------------- PROSITE
Transcript 1 (1) 1------------------------------ Transcript 1 (1)
Transcript 1 (2) Exon 1.2 PDB: L:28-58 (gaps) Transcript 1 (2)
3otp L 28 WVSAA---------------------GILQI 58
| - - | 57
32 54
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |