Chain A from PDB Type:PROTEIN Length:169
aligned with D0VX19_PETMA | D0VX19 from UniProtKB/TrEMBL Length:170
Alignment length:169
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161
D0VX19_PETMA 2 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLNNPWDCACSDILYLSRWISQHPWLVFGYLNLDHDSARCSGTNTPVRAVTKASTSPSKCPG 170
SCOP domains d3g3ba_ A: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eee..eee..................eee.....................eee.....................eee.....................eee.........hhhhhhhhhhhhh....ee.................hhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3g3b A 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLNNPWDCACSDILYLSRWISQHPWLVFGYLNLDHDSARCSGTNTPVRAVTKASTSPSKCPG 169
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160
Chain B from PDB Type:PROTEIN Length:127
aligned with LYSC_CHICK | P00698 from UniProtKB/Swiss-Prot Length:147
Alignment length:127
28 38 48 58 68 78 88 98 108 118 128 138
LYSC_CHICK 19 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGC 145
SCOP domains d3g3bb_ B: Lysozyme SCOP domains
CATH domains 3g3bB00 B:1-127 [code=1.10.530.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.....eee.....eee....ee...................hhhhhh...hhhhhhhhhhhh...hhhhhhhhhhhhh...hhhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) LACTALBUMIN_LYSOZYME_2 PDB: B:1-127 UniProt: 19-147 PROSITE (1)
PROSITE (2) ---------------------------------------------------------------------------LACTALBUMIN_LYSOZYM--------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.1a PDB: B:1-28 -----------------------------------------------------Exon 1.3 PDB: B:82-108 ------------------- Transcript 1 (1)
Transcript 1 (2) ---------------------------Exon 1.2 PDB: B:28-82 UniProt: 46-100 -------------------------Exon 1.4a Transcript 1 (2)
3g3b B 1 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGC 127
10 20 30 40 50 60 70 80 90 100 110 120
Chain C from PDB Type:PROTEIN Length:167
aligned with D0VX19_PETMA | D0VX19 from UniProtKB/TrEMBL Length:170
Alignment length:167
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161
D0VX19_PETMA 2 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLNNPWDCACSDILYLSRWISQHPWLVFGYLNLDHDSARCSGTNTPVRAVTKASTSPSKC 168
SCOP domains d3g3bc_ C: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eee..eee..................eee.....................eee.....................eee.....................eee.........hhhhhhhhhhhhh....ee.................hhhhh.......... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3g3b C 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLNNPWDCACSDILYLSRWISQHPWLVFGYLNLDHDSARCSGTNTPVRAVTKASTSPSKC 167
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160
Chain D from PDB Type:PROTEIN Length:124
aligned with LYSC_CHICK | P00698 from UniProtKB/Swiss-Prot Length:147
Alignment length:127
28 38 48 58 68 78 88 98 108 118 128 138
LYSC_CHICK 19 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGC 145
SCOP domains d3g3bd_ D: Lysozyme SCOP domains
CATH domains 3g3bD00 D:1-127 [code=1.10.530.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.....eee.....eee....ee...................hhhhhhh..hhhhhhhhhhhh.---hhhhhhhhhhhh...hhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) LACTALBUMIN_LYSOZYME_2 PDB: D:1-127 UniProt: 19-147 PROSITE (1)
PROSITE (2) ---------------------------------------------------------------------------LACTALBUMIN_LYSOZYM--------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.1a PDB: D:1-28 -----------------------------------------------------Exon 1.3 UniProt: 100-126 ------------------- Transcript 1 (1)
Transcript 1 (2) ---------------------------Exon 1.2 PDB: D:28-82 UniProt: 46-100 -------------------------Exon 1.4a Transcript 1 (2)
3g3b D 1 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVS---GMNAWVAWRNRCKGTDVQAWIRGC 127
10 20 30 40 50 60 70 80 90 100 | 110 120
100 104
Chain E from PDB Type:PROTEIN Length:159
aligned with D0VX19_PETMA | D0VX19 from UniProtKB/TrEMBL Length:170
Alignment length:164
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161
D0VX19_PETMA 2 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLNNPWDCACSDILYLSRWISQHPWLVFGYLNLDHDSARCSGTNTPVRAVTKASTSP 165
SCOP domains d3g3be_ E: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eee..eee..................eee.....................eee.....................eee.....................eee.......-----hhhhhhhhhhh...........................hhhhh.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3g3b E 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLNNPWD-----ILYLSRWISQHPWLVFGYLNLDHDSARCSGTNTPVRAVTKASTSP 164
10 20 30 40 50 60 70 80 90 100 110 | 120 130 140 150 160
114 120
Chain F from PDB Type:PROTEIN Length:125
aligned with LYSC_CHICK | P00698 from UniProtKB/Swiss-Prot Length:147
Alignment length:127
28 38 48 58 68 78 88 98 108 118 128 138
LYSC_CHICK 19 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGC 145
SCOP domains d3g3bf_ F: Lysozyme SCOP domains
CATH domains 3g3bF00 F:1-127 [code=1.10.530.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.....eee.....eee....ee...................hhhhhhh..hhhhhhhhhhhhh.--hhhhhhhhhhhh...hhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) LACTALBUMIN_LYSOZYME_2 PDB: F:1-127 UniProt: 19-147 PROSITE (1)
PROSITE (2) ---------------------------------------------------------------------------LACTALBUMIN_LYSOZYM--------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.1a PDB: F:1-28 -----------------------------------------------------Exon 1.3 UniProt: 100-126 ------------------- Transcript 1 (1)
Transcript 1 (2) ---------------------------Exon 1.2 PDB: F:28-82 UniProt: 46-100 -------------------------Exon 1.4a Transcript 1 (2)
3g3b F 1 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSD--GMNAWVAWRNRCKGTDVQAWIRGC 127
10 20 30 40 50 60 70 80 90 100| | 110 120
101 |
104
Chain G from PDB Type:PROTEIN Length:71
aligned with D0VX19_PETMA | D0VX19 from UniProtKB/TrEMBL Length:170
Alignment length:146
21 31 41 51 61 71 81 91 101 111 121 131 141 151
D0VX19_PETMA 12 TTVDCSGKSLASVPTGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLNNPWDCACSDILYLSRWISQHPWLVFGYLNLDHDSARCSGTNTPVRA 157
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...-------..----------.ee..------------------.eee..--------------..-..ee...-----------........eee....---------hhhhhhhhh....ee...........-----..... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3g3b G 11 TTV-------AS----------VLYLY------------------TRLDLD--------------LT-LTQLSLN-----------FDNLRSLTHIWLLNN---------LYLSRWISQHPWLVFGYLNLDHDSAR-----TPVRA 156
| -|| - | | - - | 60| - || 80 | - |100 110| -| 130 140 | - |
13 21| 33 37 56 61 76| | 85 97 111 121 146 152
22 77 |
79
Chain H from PDB Type:PROTEIN Length:123
aligned with LYSC_CHICK | P00698 from UniProtKB/Swiss-Prot Length:147
Alignment length:127
28 38 48 58 68 78 88 98 108 118 128 138
LYSC_CHICK 19 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGC 145
SCOP domains d3g3bh_ H: Lysozyme SCOP domains
CATH domains 3g3bH00 H:1-127 [code=1.10.530.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.....eee.....eee....ee...................hhhhhhh..hhhhhhhhhhhh----hhhhhhhhhhhh...hhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) LACTALBUMIN_LYSOZYME_2 PDB: H:1-127 UniProt: 19-147 PROSITE (1)
PROSITE (2) ---------------------------------------------------------------------------LACTALBUMIN_LYSOZYM--------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.1a PDB: H:1-28 -----------------------------------------------------Exon 1.3 UniProt: 100-126 ------------------- Transcript 1 (1)
Transcript 1 (2) ---------------------------Exon 1.2 PDB: H:28-82 UniProt: 46-100 -------------------------Exon 1.4a Transcript 1 (2)
3g3b H 1 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIV----GMNAWVAWRNRCKGTDVQAWIRGC 127
10 20 30 40 50 60 70 80 90 |- | 110 120
99 104
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |