Chain A from PDB Type:PROTEIN Length:167
aligned with D0VX18_PETMA | D0VX18 from UniProtKB/TrEMBL Length:178
Alignment length:167
19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169
D0VX18_PETMA 10 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRWISQHPGLVFGYLNLDPDSARCSGTNTPVRAVTEASTSPSKC 176
SCOP domains d3g3aa_ A: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eee..eee..................eee.....................eee.....................eee.....................eee.........hhhhhhhhhhhhhh...ee.................hhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3g3a A 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRWISQHPGLVFGYLNLDPDSARCSGTNTPVRAVTEASTSPSKC 167
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160
Chain B from PDB Type:PROTEIN Length:126
aligned with LYSC_CHICK | P00698 from UniProtKB/Swiss-Prot Length:147
Alignment length:127
28 38 48 58 68 78 88 98 108 118 128 138
LYSC_CHICK 19 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGC 145
SCOP domains d3g3ab_ B: Lysozyme SCOP domains
CATH domains 3g3aB00 B:1-127 [code=1.10.530.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.....eee.....eee....ee.....................hhhhh..hhhhhhhhhhhhhhh-hhhhhhhhhhhh...hhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) LACTALBUMIN_LYSOZYME_2 PDB: B:1-127 UniProt: 19-147 PROSITE (1)
PROSITE (2) ---------------------------------------------------------------------------LACTALBUMIN_LYSOZYM--------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.1a PDB: B:1-28 -----------------------------------------------------Exon 1.3 UniProt: 100-126 ------------------- Transcript 1 (1)
Transcript 1 (2) ---------------------------Exon 1.2 PDB: B:28-82 UniProt: 46-100 -------------------------Exon 1.4a Transcript 1 (2)
3g3a B 1 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDG-GMNAWVAWRNRCKGTDVQAWIRGC 127
10 20 30 40 50 60 70 80 90 100 | | 110 120
102 |
104
Chain C from PDB Type:PROTEIN Length:167
aligned with D0VX18_PETMA | D0VX18 from UniProtKB/TrEMBL Length:178
Alignment length:167
19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169
D0VX18_PETMA 10 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRWISQHPGLVFGYLNLDPDSARCSGTNTPVRAVTEASTSPSKC 176
SCOP domains d3g3ac_ C: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......ee...eee..................eee.....................eee.....................eee.....................eee.........hhhhhhhhhhhhhh...ee.....hhhhh.......hhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3g3a C 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRWISQHPGLVFGYLNLDPDSARCSGTNTPVRAVTEASTSPSKC 167
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160
Chain D from PDB Type:PROTEIN Length:126
aligned with LYSC_CHICK | P00698 from UniProtKB/Swiss-Prot Length:147
Alignment length:127
28 38 48 58 68 78 88 98 108 118 128 138
LYSC_CHICK 19 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGC 145
SCOP domains d3g3ad_ D: Lysozyme SCOP domains
CATH domains 3g3aD00 D:1-127 [code=1.10.530.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.....eee.....eee....ee...................hhhhhhh..hhhhhhhhhhhhhhh-hhhhhhhhhhhh...hhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) LACTALBUMIN_LYSOZYME_2 PDB: D:1-127 UniProt: 19-147 PROSITE (1)
PROSITE (2) ---------------------------------------------------------------------------LACTALBUMIN_LYSOZYM--------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.1a PDB: D:1-28 -----------------------------------------------------Exon 1.3 UniProt: 100-126 ------------------- Transcript 1 (1)
Transcript 1 (2) ---------------------------Exon 1.2 PDB: D:28-82 UniProt: 46-100 -------------------------Exon 1.4a Transcript 1 (2)
3g3a D 1 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDG-GMNAWVAWRNRCKGTDVQAWIRGC 127
10 20 30 40 50 60 70 80 90 100 | | 110 120
102 |
104
Chain E from PDB Type:PROTEIN Length:167
aligned with D0VX18_PETMA | D0VX18 from UniProtKB/TrEMBL Length:178
Alignment length:167
19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169
D0VX18_PETMA 10 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRWISQHPGLVFGYLNLDPDSARCSGTNTPVRAVTEASTSPSKC 176
SCOP domains d3g3ae_ E: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eee..eee..................eee.....................eee.....................eee.....................eee.........hhhhhhhhhhhhhh...ee.................hhhhh.....hhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3g3a E 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRWISQHPGLVFGYLNLDPDSARCSGTNTPVRAVTEASTSPSKC 167
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160
Chain F from PDB Type:PROTEIN Length:126
aligned with LYSC_CHICK | P00698 from UniProtKB/Swiss-Prot Length:147
Alignment length:127
28 38 48 58 68 78 88 98 108 118 128 138
LYSC_CHICK 19 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGC 145
SCOP domains d3g3af_ F: Lysozyme SCOP domains
CATH domains 3g3aF00 F:1-127 [code=1.10.530.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.....eee.....eee....ee...................hhhhhhh..hhhhhhhhhhhhhhh-hhhhhhhhhhhh...hhhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) LACTALBUMIN_LYSOZYME_2 PDB: F:1-127 UniProt: 19-147 PROSITE (1)
PROSITE (2) ---------------------------------------------------------------------------LACTALBUMIN_LYSOZYM--------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.1a PDB: F:1-28 -----------------------------------------------------Exon 1.3 UniProt: 100-126 ------------------- Transcript 1 (1)
Transcript 1 (2) ---------------------------Exon 1.2 PDB: F:28-82 UniProt: 46-100 -------------------------Exon 1.4a Transcript 1 (2)
3g3a F 1 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDG-GMNAWVAWRNRCKGTDVQAWIRGC 127
10 20 30 40 50 60 70 80 90 100 | | 110 120
102 |
104
Chain G from PDB Type:PROTEIN Length:165
aligned with D0VX18_PETMA | D0VX18 from UniProtKB/TrEMBL Length:178
Alignment length:167
19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169
D0VX18_PETMA 10 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRWISQHPGLVFGYLNLDPDSARCSGTNTPVRAVTEASTSPSKC 176
SCOP domains d3g 3ag_ G: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...--.eee..eee..................eee.....................eee.....................eee.....................eee.........hhhhhhhhhhhhhh...ee.................hhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3g3a G 1 ACP--CSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRWISQHPGLVFGYLNLDPDSARCSGTNTPVRAVTEASTSPSKC 167
| | 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160
3 6
Chain H from PDB Type:PROTEIN Length:124
aligned with LYSC_CHICK | P00698 from UniProtKB/Swiss-Prot Length:147
Alignment length:127
28 38 48 58 68 78 88 98 108 118 128 138
LYSC_CHICK 19 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGC 145
SCOP domains d3g3ah_ H: Lysozyme SCOP domains
CATH domains 3g3aH00 H:1-127 [code=1.10.530.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.....eee.....eee....ee...................hhhhhhh..hhhhhhhhhhhhh---hhhhhhhhhhhh...hhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) LACTALBUMIN_LYSOZYME_2 PDB: H:1-127 UniProt: 19-147 PROSITE (1)
PROSITE (2) ---------------------------------------------------------------------------LACTALBUMIN_LYSOZYM--------------------------------- PROSITE (2)
Transcript 1 (1) Exon 1.1a PDB: H:1-28 -----------------------------------------------------Exon 1.3 UniProt: 100-126 ------------------- Transcript 1 (1)
Transcript 1 (2) ---------------------------Exon 1.2 PDB: H:28-82 UniProt: 46-100 -------------------------Exon 1.4a Transcript 1 (2)
3g3a H 1 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVS---GMNAWVAWRNRCKGTDVQAWIRGC 127
10 20 30 40 50 60 70 80 90 100 | 110 120
100 104
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |