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(-) Description

Title :  AXIAL LIGAND SWAPPING IN DOUBLE MUTANT MAINTAINS INTRADIOL-CLEAVAGE CHEMISTRY IN PROTOCATECHUATE 3,4-DIOXYGENASE
 
Authors :  V. M. Purpero, J. D. Lipscomb
Date :  09 Apr 10  (Deposition) - 27 Apr 11  (Release) - 27 Apr 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.78
Chains :  Asym. Unit :  A,B,C,D,E,F,M,N,O,P,Q,R
Biol. Unit 1:  A,B,C,D,E,F,M,N,O,P,Q,R  (2x)
Keywords :  Dioxygenase, Non-Heme, Iron, Intradiol, Catechol, Substrate Analogue, Protocatechuate, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  V. M. Purpero, J. D. Lipscomb
Axial Ligand Swapping In Double Mutant Maintains Intradiol-Cleavage Chemistry In Protocatechuate 3, 4-Dioxygenase
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN
    Chains: A, B, C, D, E, F
    EC Number: 1.13.11.3
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PCE VECTOR, PT7-7
    Expression System Strain: BL21 (DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: PCAG
    Organism Scientific: PSEUDOMONAS PUTIDA
    Organism Taxid: 303
    Strain: P. PUTIDA
    Synonym: 3,4-PCD
 
Molecule 2 - PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN
    Chains: M, N, O, P, Q, R
    EC Number: 1.13.11.3
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PCE VECTOR, PT7-7
    Expression System Strain: BL21 (DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: PCAH
    Mutation: YES
    Organism Scientific: PSEUDOMONAS PUTIDA
    Organism Taxid: 303
    Synonym: 3,4-PCD

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFMNOPQR
Biological Unit 1 (2x): ABCDEFMNOPQR

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 102)

Asymmetric Unit (6, 102)
No.NameCountTypeFull Name
1BME25Ligand/IonBETA-MERCAPTOETHANOL
2CAQ12Ligand/IonCATECHOL
3CL5Ligand/IonCHLORIDE ION
4FE6Ligand/IonFE (III) ION
5GOL42Ligand/IonGLYCEROL
6SO412Ligand/IonSULFATE ION
Biological Unit 1 (4, 182)
No.NameCountTypeFull Name
1BME50Ligand/IonBETA-MERCAPTOETHANOL
2CAQ24Ligand/IonCATECHOL
3CL-1Ligand/IonCHLORIDE ION
4FE-1Ligand/IonFE (III) ION
5GOL84Ligand/IonGLYCEROL
6SO424Ligand/IonSULFATE ION

(-) Sites  (101, 101)

Asymmetric Unit (101, 101)
No.NameEvidenceResiduesDescription
001AC1SOFTWAREASN A:37 , THR A:105 , HIS A:107 , GOL A:204 , HOH A:1194BINDING SITE FOR RESIDUE SO4 A 201
002AC2SOFTWARETHR A:98 , PHE A:99 , ASP A:100 , HOH A:2124BINDING SITE FOR RESIDUE BME A 202
003AC3SOFTWARETHR A:169 , ILE A:171 , ARG A:184 , PHE A:185 , ASP A:186 , ARG A:188 , HOH A:2061 , HOH A:2062BINDING SITE FOR RESIDUE GOL A 203
004AC4SOFTWARETRP A:36 , ASN A:37 , THR A:95 , ALA A:96 , TRP A:104 , THR A:105 , SO4 A:201 , HOH A:1768BINDING SITE FOR RESIDUE GOL A 204
005AC5SOFTWAREARG A:38 , LEU A:39 , LYS A:41 , ASN A:84 , LEU A:85 , ASN A:87 , ASN A:90BINDING SITE FOR RESIDUE GOL A 205
006AC6SOFTWARELEU A:23 , ASN A:28 , PRO A:29 , HOH A:222 , ASN M:366 , PHE M:367 , GLY M:424 , VAL M:426BINDING SITE FOR RESIDUE GOL A 206
007AC7SOFTWAREASN A:152 , PRO A:164 , ARG A:167 , HOH A:1266BINDING SITE FOR RESIDUE CAQ A 207
008AC8SOFTWARELEU A:21 , ALA A:22 , LEU A:23 , GLU A:24 , THR A:30 , GLU A:34 , TRP A:36 , HOH A:1136 , HOH A:1674BINDING SITE FOR RESIDUE GOL A 208
009AC9SOFTWARETYR M:408 , HIS M:447 , HIS M:460 , TYR M:462 , CAQ M:539BINDING SITE FOR RESIDUE FE M 600
010BC1SOFTWAREGLN M:503 , ILE M:505 , ARG M:522 , PHE M:523 , ASP M:524BINDING SITE FOR RESIDUE GOL M 12
011BC2SOFTWAREARG M:407 , LEU M:419BINDING SITE FOR RESIDUE GOL M 16
012BC3SOFTWAREARG M:409 , PRO M:421BINDING SITE FOR RESIDUE BME M 28
013BC4SOFTWAREPRO M:515 , ARG O:307 , GLN O:341BINDING SITE FOR RESIDUE BME M 30
014BC5SOFTWAREARG M:333 , HOH M:1220 , PRO N:322 , ILE N:328BINDING SITE FOR RESIDUE GOL M 10
015BC6SOFTWAREARG M:450 , PRO M:453 , HOH M:2057 , HOH M:2254 , SER O:338 , PRO O:340BINDING SITE FOR RESIDUE GOL M 14
016BC7SOFTWARETYR A:16 , ASP M:413 , HIS M:447 , PRO M:448 , TRP M:449 , ARG M:450 , MET M:516 , CAQ M:539 , HOH M:2287 , HOH M:2303BINDING SITE FOR RESIDUE BME M 1
017BC8SOFTWAREASP M:432 , SER M:433BINDING SITE FOR RESIDUE CL M 2
018BC9SOFTWAREPRO A:15 , TYR A:16 , BME M:1 , TYR M:408 , HIS M:447 , TRP M:449 , ARG M:457 , HIS M:460 , TYR M:462 , FE M:600 , HOH M:861 , HOH M:2030 , HOH M:2117BINDING SITE FOR RESIDUE CAQ M 539
019CC1SOFTWAREPHE M:356 , CYS M:429 , LEU M:430 , HOH M:917BINDING SITE FOR RESIDUE BME M 540
020CC2SOFTWAREASN B:37 , THR B:105 , HIS B:107 , HOH B:2181BINDING SITE FOR RESIDUE SO4 B 201
021CC3SOFTWARETHR B:98 , PHE B:99 , ASP B:100 , HOH B:2116 , HOH B:2193BINDING SITE FOR RESIDUE BME B 202
022CC4SOFTWARELEU B:23 , ASN B:28 , PRO B:29 , HOH B:949 , ASN N:366 , PHE N:367 , GLY N:424 , VAL N:426 , HOH N:873BINDING SITE FOR RESIDUE GOL B 203
023CC5SOFTWAREGLY B:60 , ARG B:188BINDING SITE FOR RESIDUE BME B 204
024CC6SOFTWARETHR B:169 , ILE B:171 , ARG B:184 , PHE B:185 , ASP B:186 , ARG B:188 , HOH B:2083 , HOH B:2084BINDING SITE FOR RESIDUE GOL B 205
025CC7SOFTWAREARG B:167 , HOH B:1873BINDING SITE FOR RESIDUE CAQ B 206
026CC8SOFTWAREARG B:38 , LEU B:39 , ASN B:84 , LEU B:85 , ASN B:87 , ASN B:90BINDING SITE FOR RESIDUE GOL B 207
027CC9SOFTWARECAQ N:3 , TYR N:408 , HIS N:447 , HIS N:460 , TYR N:462BINDING SITE FOR RESIDUE FE N 600
028DC1SOFTWAREARG N:409 , LEU N:419 , PRO N:421 , HOH N:830BINDING SITE FOR RESIDUE SO4 N 11
029DC2SOFTWAREARG N:307 , GLN N:341 , ARG N:531 , PRO R:515BINDING SITE FOR RESIDUE BME N 18
030DC3SOFTWAREARG N:333 , HOH N:1079 , ILE O:328BINDING SITE FOR RESIDUE GOL N 26
031DC4SOFTWARESER M:338 , PRO M:340 , ARG N:450 , HOH N:1404 , MET Q:516BINDING SITE FOR RESIDUE BME N 8
032DC5SOFTWAREGLN N:503 , ILE N:505 , LYS N:507 , ARG N:522 , PHE N:523 , ASP N:524BINDING SITE FOR RESIDUE GOL N 1
033DC6SOFTWAREPRO B:15 , TYR B:16 , HOH B:2031 , TYR N:408 , HIS N:447 , TRP N:449 , ARG N:457 , HIS N:460 , TYR N:462 , HOH N:563 , FE N:600BINDING SITE FOR RESIDUE CAQ N 3
034DC7SOFTWAREARG N:450BINDING SITE FOR RESIDUE CL N 539
035DC8SOFTWAREASN C:37 , ARG C:38 , THR C:105 , HIS C:107 , GOL C:203BINDING SITE FOR RESIDUE SO4 C 201
036DC9SOFTWAREARG C:38 , LEU C:39 , ALA C:40 , LYS C:41 , ASN C:84 , LEU C:85 , ASN C:87 , ALA C:88 , PHE C:89 , ASN C:90BINDING SITE FOR RESIDUE GOL C 202
037EC1SOFTWARETRP C:36 , THR C:95 , ALA C:96 , TRP C:104 , THR C:105 , SO4 C:201 , HOH C:2056BINDING SITE FOR RESIDUE GOL C 203
038EC2SOFTWAREGLU C:168 , THR C:169 , ILE C:171 , ARG C:184 , PHE C:185 , ASP C:186 , ARG C:188BINDING SITE FOR RESIDUE GOL C 204
039EC3SOFTWARETHR C:98 , PHE C:99 , ASP C:100 , HOH C:2129BINDING SITE FOR RESIDUE BME C 205
040EC4SOFTWAREPRO C:164 , ARG C:167 , GLU C:168 , HOH C:923BINDING SITE FOR RESIDUE CAQ C 206
041EC5SOFTWARELEU C:21 , ALA C:22 , LEU C:23 , GLU C:24 , GLU C:34 , TRP C:36 , HOH C:1634 , HOH C:1974BINDING SITE FOR RESIDUE GOL C 207
042EC6SOFTWARECAQ O:4 , TYR O:408 , HIS O:447 , HIS O:460 , TYR O:462BINDING SITE FOR RESIDUE FE O 600
043EC7SOFTWAREARG O:450 , CL O:541 , HOH O:1779 , HOH O:2187BINDING SITE FOR RESIDUE SO4 O 12
044EC8SOFTWAREGLU D:176 , PHE O:356 , CYS O:429 , LEU O:430 , HOH O:1397 , HOH O:2176BINDING SITE FOR RESIDUE GOL O 17
045EC9SOFTWARELEU C:23 , ASN C:28 , PRO C:29 , HOH O:148 , ASN O:366 , PHE O:367 , ARG O:409 , GLY O:424 , VAL O:426 , HOH O:557BINDING SITE FOR RESIDUE GOL O 29
046FC1SOFTWARESER N:338 , PRO N:340 , ARG O:450 , MET R:516BINDING SITE FOR RESIDUE BME O 9
047FC2SOFTWAREGLN O:503 , ILE O:505 , LYS O:507 , ARG O:522 , PHE O:523 , ASP O:524BINDING SITE FOR RESIDUE GOL O 1
048FC3SOFTWAREILE M:328 , ARG O:333 , HOH O:1292BINDING SITE FOR RESIDUE GOL O 539
049FC4SOFTWAREPRO C:15 , TYR C:16 , TYR O:408 , HIS O:447 , TRP O:449 , ARG O:457 , HIS O:460 , TYR O:462 , FE O:600 , HOH O:698 , HOH O:2032 , HOH O:2091BINDING SITE FOR RESIDUE CAQ O 4
050FC5SOFTWARETHR O:321 , PRO O:322 , ASP O:323 , LYS O:493 , HOH O:553BINDING SITE FOR RESIDUE BME O 540
051FC6SOFTWARESO4 O:12 , TRP O:449 , ARG O:450BINDING SITE FOR RESIDUE CL O 541
052FC7SOFTWAREARG O:383 , PRO O:391BINDING SITE FOR RESIDUE BME O 542
053FC8SOFTWAREASN D:37 , THR D:105 , HIS D:107 , BME D:207 , HOH D:1068BINDING SITE FOR RESIDUE SO4 D 201
054FC9SOFTWARETHR D:98 , PHE D:99 , ASP D:100 , HOH D:2036 , HOH D:2122BINDING SITE FOR RESIDUE BME D 202
055GC1SOFTWAREARG D:38 , LEU D:39 , LYS D:41 , ASN D:84 , LEU D:85 , ASN D:87 , ASN D:90 , HOH D:1227BINDING SITE FOR RESIDUE GOL D 203
056GC2SOFTWARETHR D:169 , ILE D:171 , ARG D:184 , PHE D:185 , ASP D:186 , ARG D:188 , HOH D:1590 , HOH D:2114BINDING SITE FOR RESIDUE GOL D 204
057GC3SOFTWAREGLN C:33 , ASN C:84 , HOH C:865 , ARG D:174 , HIS O:353 , GLY O:355BINDING SITE FOR RESIDUE GOL D 205
058GC4SOFTWARELEU D:23 , ASN D:28 , PRO D:29 , HOH D:222 , HOH D:257 , ASN P:366 , PHE P:367 , GLY P:424 , VAL P:426BINDING SITE FOR RESIDUE GOL D 206
059GC5SOFTWARETRP D:36 , ASN D:37 , THR D:95 , ALA D:96 , TRP D:104 , THR D:105 , SO4 D:201 , HOH D:1448 , HOH D:1498BINDING SITE FOR RESIDUE BME D 207
060GC6SOFTWAREASN D:152 , PRO D:164 , ARG D:167 , HOH D:1190BINDING SITE FOR RESIDUE CAQ D 208
061GC7SOFTWARETYR P:408 , HIS P:447 , HIS P:460 , TYR P:462 , CAQ P:542BINDING SITE FOR RESIDUE FE P 600
062GC8SOFTWAREALA P:358BINDING SITE FOR RESIDUE BME P 5
063GC9SOFTWAREARG P:450 , PRO P:453 , PRO P:515 , MET P:516 , HOH P:2077 , SER R:338 , ILE R:339 , PRO R:340BINDING SITE FOR RESIDUE GOL P 17
064HC1SOFTWAREGLN P:503 , ILE P:505 , ARG P:522 , PHE P:523 , ASP P:524 , HOH P:2169BINDING SITE FOR RESIDUE GOL P 1
065HC2SOFTWARETYR D:16 , SO4 P:2 , ASP P:413 , ARG P:414 , HIS P:447 , PRO P:448 , TRP P:449 , ARG P:450BINDING SITE FOR RESIDUE BME P 539
066HC3SOFTWAREPHE P:356 , CYS P:429 , LEU P:430 , HOH P:1172BINDING SITE FOR RESIDUE GOL P 540
067HC4SOFTWAREHIS P:534 , PHE P:535 , GLU P:536BINDING SITE FOR RESIDUE BME P 541
068HC5SOFTWAREARG P:450 , BME P:539BINDING SITE FOR RESIDUE SO4 P 2
069HC6SOFTWAREPRO D:15 , TYR D:16 , TYR P:408 , HIS P:447 , TRP P:449 , ARG P:457 , HIS P:460 , TYR P:462 , FE P:600 , HOH P:815 , HOH P:2033 , HOH P:2094BINDING SITE FOR RESIDUE CAQ P 542
070HC7SOFTWAREARG P:333 , HOH P:1001BINDING SITE FOR RESIDUE BME P 543
071HC8SOFTWAREASN E:37 , THR E:105 , HIS E:107 , BME E:208 , HOH E:2299BINDING SITE FOR RESIDUE SO4 E 201
072HC9SOFTWAREGLU E:168 , THR E:169 , ILE E:171 , ARG E:184 , ASP E:186 , ARG E:188 , HOH E:1822 , HOH E:2148BINDING SITE FOR RESIDUE GOL E 202
073IC1SOFTWARETYR E:56 , GLY E:60 , ARG E:188 , HOH E:2177BINDING SITE FOR RESIDUE GOL E 203
074IC2SOFTWAREALA E:25 , PHE E:99 , ASP E:100 , LYS Q:411BINDING SITE FOR RESIDUE BME E 204
075IC3SOFTWAREARG E:38 , LEU E:39 , ALA E:40 , LYS E:41 , ASN E:84 , LEU E:85 , ASN E:87 , ASN E:90BINDING SITE FOR RESIDUE GOL E 205
076IC4SOFTWARELEU E:23 , ASN E:28 , PRO E:29 , HOH E:1218 , ASN Q:366 , PHE Q:367 , GLY Q:424 , VAL Q:426 , HOH Q:821BINDING SITE FOR RESIDUE GOL E 206
077IC5SOFTWAREPRO E:164 , ARG E:167 , HOH E:1521BINDING SITE FOR RESIDUE CAQ E 207
078IC6SOFTWARETRP E:36 , ASN E:37 , THR E:95 , ALA E:96 , GLU E:103 , TRP E:104 , THR E:105 , SO4 E:201 , HOH E:1562BINDING SITE FOR RESIDUE BME E 208
079IC7SOFTWARECAQ Q:6 , TYR Q:408 , HIS Q:447 , HIS Q:460 , TYR Q:462BINDING SITE FOR RESIDUE FE Q 600
080IC8SOFTWAREARG Q:409 , LEU Q:419 , PRO Q:421 , HOH Q:691 , HOH Q:1756BINDING SITE FOR RESIDUE SO4 Q 10
081IC9SOFTWAREASN O:514 , PRO O:515 , ARG Q:307 , GLN Q:341 , ARG Q:531 , GLU Q:536 , HOH Q:1457 , HOH Q:1529BINDING SITE FOR RESIDUE GOL Q 15
082JC1SOFTWAREGLN Q:503 , ILE Q:505 , ARG Q:522 , PHE Q:523 , ASP Q:524BINDING SITE FOR RESIDUE GOL Q 1
083JC2SOFTWARELYS M:390 , ARG Q:383 , ASP Q:434BINDING SITE FOR RESIDUE SO4 Q 539
084JC3SOFTWAREPRO E:15 , TYR E:16 , TYR Q:408 , HIS Q:447 , TRP Q:449 , ARG Q:457 , HIS Q:460 , TYR Q:462 , FE Q:600 , HOH Q:618 , HOH Q:2045BINDING SITE FOR RESIDUE CAQ Q 6
085JC4SOFTWARESER P:338 , PRO P:340 , ARG Q:450BINDING SITE FOR RESIDUE GOL Q 540
086JC5SOFTWAREARG Q:450BINDING SITE FOR RESIDUE CL Q 541
087JC6SOFTWAREASN F:37 , ARG F:38 , THR F:105 , HIS F:107 , GOL F:203 , HOH F:1200BINDING SITE FOR RESIDUE SO4 F 201
088JC7SOFTWAREGLU F:168 , ILE F:171 , ARG F:184 , PHE F:185 , ASP F:186BINDING SITE FOR RESIDUE GOL F 202
089JC8SOFTWAREASN F:37 , THR F:95 , ALA F:96 , TRP F:104 , THR F:105 , SO4 F:201 , BME F:207 , HOH F:2064 , HOH F:2070BINDING SITE FOR RESIDUE GOL F 203
090JC9SOFTWAREARG F:38 , LEU F:39 , ALA F:40 , LYS F:41 , ASN F:84 , LEU F:85 , ASN F:87 , ASN F:90BINDING SITE FOR RESIDUE GOL F 204
091KC1SOFTWAREPRO F:29 , ASN R:366 , PHE R:367BINDING SITE FOR RESIDUE BME F 205
092KC2SOFTWAREPRO F:164 , ARG F:167 , HOH F:1181BINDING SITE FOR RESIDUE CAQ F 206
093KC3SOFTWARETHR F:98 , PHE F:99 , ASP F:100 , GOL F:203 , HOH F:1149 , HOH F:2074BINDING SITE FOR RESIDUE BME F 207
094KC4SOFTWARECAQ R:1 , TYR R:408 , HIS R:447 , HIS R:460 , TYR R:462BINDING SITE FOR RESIDUE FE R 600
095KC5SOFTWAREGLN R:503 , ILE R:505 , LYS R:507 , ARG R:522 , PHE R:523 , ASP R:524BINDING SITE FOR RESIDUE GOL R 15
096KC6SOFTWAREASN R:305 , GLN R:530 , LYS R:532BINDING SITE FOR RESIDUE BME R 21
097KC7SOFTWAREILE P:328 , ARG R:333 , HOH R:1543BINDING SITE FOR RESIDUE GOL R 23
098KC8SOFTWAREPRO P:515 , ARG R:307 , PRO R:340 , GLN R:341 , ARG R:531 , GLU R:536 , HOH R:549 , HOH R:1528BINDING SITE FOR RESIDUE GOL R 13
099KC9SOFTWAREARG R:409 , LEU R:419 , PRO R:421 , HOH R:1680BINDING SITE FOR RESIDUE SO4 R 3
100LC1SOFTWAREPRO F:15 , TYR F:16 , TYR R:408 , HIS R:447 , TRP R:449 , ARG R:457 , HIS R:460 , TYR R:462 , FE R:600 , HOH R:750 , HOH R:2037BINDING SITE FOR RESIDUE CAQ R 1
101LC2SOFTWAREARG R:383BINDING SITE FOR RESIDUE BME R 540

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3MI5)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3MI5)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3MI5)

(-) PROSITE Motifs  (1, 12)

Asymmetric Unit (1, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1INTRADIOL_DIOXYGENASPS00083 Intradiol ring-cleavage dioxygenases signature.PCXA_PSEPU52-80
 
 
 
 
 		  6A:51-79
B:51-79
C:51-79
D:51-79
E:51-79
F:51-79
PCXB_PSEPU81-109
 
 
 
 
 		  6M:380-408
N:380-408
O:380-408
P:380-408
Q:380-408
R:380-408
Biological Unit 1 (1, 24)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1INTRADIOL_DIOXYGENASPS00083 Intradiol ring-cleavage dioxygenases signature.PCXA_PSEPU52-80
 
 
 
 
 		  12A:51-79
B:51-79
C:51-79
D:51-79
E:51-79
F:51-79
PCXB_PSEPU81-109
 
 
 
 
 		  12M:380-408
N:380-408
O:380-408
P:380-408
Q:380-408
R:380-408

(-) Exons   (0, 0)

(no "Exon" information available for 3MI5)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:200
 aligned with PCXA_PSEPU | P00436 from UniProtKB/Swiss-Prot  Length:201

    Alignment length:200
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201
           PCXA_PSEPU     2 PIELLPETPSQTAGPYVHIGLALEAAGNPTRDQEIWNRLAKPDAPGEHILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNAAGVPMAPHINISLFARGINIHLHTRLYFDDEAQANAKCPVLNLIEQPQRRETLIAKRCEVDGKTAYRFDIRIQGEGETVFFDF 201
               SCOP domains d3mi5a_ A: Protocatechuate-3,4-dioxygenase, alpha chain                                                                                                                                                  SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................hhhhhhhhhhh....................eeeeeeeee..........eeeee....................eeeee......eeeeeee....ee.....ee...eeeeee.......eeeeeee..hhhhhhh..hhhhh.hhhhhh..eeeeeee..eeeee..ee.........ee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------INTRADIOL_DIOXYGENAS         ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mi5 A   1 PIELLPETPSQTAGPYVHIGLALEAAGNPTRDQEIWNRLAKPDAPGEHILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNAAGVPMAPHINISLFARGINIHLHTRLYFDDEAQANAKCPVLNLIEQPQRRETLIAKRCEVDGKTAYRFDIRIQGEGETVFFDF 200
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200


Chain B from PDB  Type:PROTEIN  Length:200
 aligned with PCXA_PSEPU | P00436 from UniProtKB/Swiss-Prot  Length:201

    Alignment length:200
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201
           PCXA_PSEPU     2 PIELLPETPSQTAGPYVHIGLALEAAGNPTRDQEIWNRLAKPDAPGEHILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNAAGVPMAPHINISLFARGINIHLHTRLYFDDEAQANAKCPVLNLIEQPQRRETLIAKRCEVDGKTAYRFDIRIQGEGETVFFDF 201
               SCOP domains d3mi5b_ B: Protocatechuate-3,4-dioxygenase, alpha chain                                                                                                                                                  SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................hhhhhhhhhhh....................eeeeeeeee..........eeeee....................eeeee......eeeeeee................eeeeee.......eeeeeee..hhhhhhh..hhhhh.hhhhhh..eeeeeee..eeeee..ee.........ee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------INTRADIOL_DIOXYGENAS         ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mi5 B   1 PIELLPETPSQTAGPYVHIGLALEAAGNPTRDQEIWNRLAKPDAPGEHILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNAAGVPMAPHINISLFARGINIHLHTRLYFDDEAQANAKCPVLNLIEQPQRRETLIAKRCEVDGKTAYRFDIRIQGEGETVFFDF 200
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200


Chain C from PDB  Type:PROTEIN  Length:200
 aligned with PCXA_PSEPU | P00436 from UniProtKB/Swiss-Prot  Length:201

    Alignment length:200
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201
           PCXA_PSEPU     2 PIELLPETPSQTAGPYVHIGLALEAAGNPTRDQEIWNRLAKPDAPGEHILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNAAGVPMAPHINISLFARGINIHLHTRLYFDDEAQANAKCPVLNLIEQPQRRETLIAKRCEVDGKTAYRFDIRIQGEGETVFFDF 201
               SCOP domains d3mi5c_ C: Protocatechuate-3,4-dioxygenase, alpha chain                                                                                                                                                  SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................hhhhhhhhhhh....................eeeeeeeee..........eeeee....................eeeee......eeeeeee................eeeeee.......eeeeeee..hhhhhhh..hhhhh.hhhhhh..eeeeeee..eeeee..ee.........ee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------INTRADIOL_DIOXYGENAS         ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mi5 C   1 PIELLPETPSQTAGPYVHIGLALEAAGNPTRDQEIWNRLAKPDAPGEHILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNAAGVPMAPHINISLFARGINIHLHTRLYFDDEAQANAKCPVLNLIEQPQRRETLIAKRCEVDGKTAYRFDIRIQGEGETVFFDF 200
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200


Chain D from PDB  Type:PROTEIN  Length:200
 aligned with PCXA_PSEPU | P00436 from UniProtKB/Swiss-Prot  Length:201

    Alignment length:200
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201
           PCXA_PSEPU     2 PIELLPETPSQTAGPYVHIGLALEAAGNPTRDQEIWNRLAKPDAPGEHILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNAAGVPMAPHINISLFARGINIHLHTRLYFDDEAQANAKCPVLNLIEQPQRRETLIAKRCEVDGKTAYRFDIRIQGEGETVFFDF 201
               SCOP domains d3mi5d_ D: Protocatechuate-3,4-dioxygenase, alpha chain                                                                                                                                                  SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................hhhhhhhhhhh....................eeeeeeeee..........eeeee....................eeeee......eeeeeee....ee.....ee...eeeeee.......eeeeeee..hhhhhhh..hhhhh.hhhhhh..eeeeeee..eeeee..ee.........ee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------INTRADIOL_DIOXYGENAS         ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mi5 D   1 PIELLPETPSQTAGPYVHIGLALEAAGNPTRDQEIWNRLAKPDAPGEHILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNAAGVPMAPHINISLFARGINIHLHTRLYFDDEAQANAKCPVLNLIEQPQRRETLIAKRCEVDGKTAYRFDIRIQGEGETVFFDF 200
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200


Chain E from PDB  Type:PROTEIN  Length:200
 aligned with PCXA_PSEPU | P00436 from UniProtKB/Swiss-Prot  Length:201

    Alignment length:200
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201
           PCXA_PSEPU     2 PIELLPETPSQTAGPYVHIGLALEAAGNPTRDQEIWNRLAKPDAPGEHILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNAAGVPMAPHINISLFARGINIHLHTRLYFDDEAQANAKCPVLNLIEQPQRRETLIAKRCEVDGKTAYRFDIRIQGEGETVFFDF 201
               SCOP domains d3mi5e_ E: Protocatechuate-3,4-dioxygenase, alpha chain                                                                                                                                                  SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............hhhhhhhhhhhh....................eeeeeeeee..........eeeee....................eeeee......eeeeeee....ee.....ee..eeeeeee.......eeeeeee..hhhhhhhh.hhhhh.hhhhhh..eeeeeee..eeeee..ee.........ee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------INTRADIOL_DIOXYGENAS         ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mi5 E   1 PIELLPETPSQTAGPYVHIGLALEAAGNPTRDQEIWNRLAKPDAPGEHILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNAAGVPMAPHINISLFARGINIHLHTRLYFDDEAQANAKCPVLNLIEQPQRRETLIAKRCEVDGKTAYRFDIRIQGEGETVFFDF 200
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200


Chain F from PDB  Type:PROTEIN  Length:200
 aligned with PCXA_PSEPU | P00436 from UniProtKB/Swiss-Prot  Length:201

    Alignment length:200
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201
           PCXA_PSEPU     2 PIELLPETPSQTAGPYVHIGLALEAAGNPTRDQEIWNRLAKPDAPGEHILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNAAGVPMAPHINISLFARGINIHLHTRLYFDDEAQANAKCPVLNLIEQPQRRETLIAKRCEVDGKTAYRFDIRIQGEGETVFFDF 201
               SCOP domains d3mi5f_ F: Protocatechuate-3,4-dioxygenase, alpha chain                                                                                                                                                  SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ----------------------Dioxygenase_C-3mi5F01 F:23-192                                                                                                                                            -------- Pfam domains (1)
           Pfam domains (2) ----------------------Dioxygenase_C-3mi5F02 F:23-192                                                                                                                                            -------- Pfam domains (2)
           Pfam domains (3) ----------------------Dioxygenase_C-3mi5F03 F:23-192                                                                                                                                            -------- Pfam domains (3)
           Pfam domains (4) ----------------------Dioxygenase_C-3mi5F04 F:23-192                                                                                                                                            -------- Pfam domains (4)
           Pfam domains (5) ----------------------Dioxygenase_C-3mi5F05 F:23-192                                                                                                                                            -------- Pfam domains (5)
           Pfam domains (6) ----------------------Dioxygenase_C-3mi5F06 F:23-192                                                                                                                                            -------- Pfam domains (6)
         Sec.struct. author ................hhhhhhhhhhh....................eeeeeeeee..........eeeee....................eeeee......eeeeeee....ee.....ee...eeeeee.......eeeeeee..hhhhhhh..hhhhh.hhhhhh..eeeeeee..eeeee..ee.........ee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------INTRADIOL_DIOXYGENAS         ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mi5 F   1 PIELLPETPSQTAGPYVHIGLALEAAGNPTRDQEIWNRLAKPDAPGEHILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNAAGVPMAPHINISLFARGINIHLHTRLYFDDEAQANAKCPVLNLIEQPQRRETLIAKRCEVDGKTAYRFDIRIQGEGETVFFDF 200
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200


Chain M from PDB  Type:PROTEIN  Length:238
 aligned with PCXB_PSEPU | P00437 from UniProtKB/Swiss-Prot  Length:239

    Alignment length:238
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231        
           PCXB_PSEPU     2 PAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPNFSHLGFGAHDHDLLLNFNNGGLPIGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFGISGPSIATKLITQLYFEGDPLIPMCPIVKSIANPEAVQQLIAKLDMNNANPMDCLAYRFDIVLRGQRKTHFENC 239
               SCOP domains d3mi5m_ M: Protocatechuate-3,4-dioxygenase, beta chain                                                                                                                                                                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eee...............hhhhh........ee...hhhhhh.............................eeeeeeeeee.........eeeee.........................eeeee.....eeeeeee....eee.....eee...eeeee........eeeeeee....hhhhh.hhhhh.hhhhhhh.eeee.hhhh.....eeee..eee..eee...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------INTRADIOL_DIOXYGENAS         ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mi5 M 301 PAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPNFSHLGFGAHDHDLLLNFNNGGLPIGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPHPWRNGPNDWRPAHIYFGISGPSIATKLITQLYFEGDPLIPMCPIVKSIANPEAVQQLIAKLDMNNANPMDCLAYRFDIVLRGQRKTHFENC 538
                                   310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530        


Chain N from PDB  Type:PROTEIN  Length:238
 aligned with PCXB_PSEPU | P00437 from UniProtKB/Swiss-Prot  Length:239

    Alignment length:238
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231        
           PCXB_PSEPU     2 PAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPNFSHLGFGAHDHDLLLNFNNGGLPIGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFGISGPSIATKLITQLYFEGDPLIPMCPIVKSIANPEAVQQLIAKLDMNNANPMDCLAYRFDIVLRGQRKTHFENC 239
               SCOP domains d3mi5n_ N: Protocatechuate-3,4-dioxygenase, beta chain                                                                                                                                                                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......ee...............hhhhh........ee...hhhhhh.............................eeeeeeeeee.........eeeee.........................eeeee.....eeeeeee....eee.....eee..eeeeee........eeeeeee....hhhhh.hhhhh.hhhhhhh.eeee.hhhh.....eeee..eee..ee....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------INTRADIOL_DIOXYGENAS         ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mi5 N 301 PAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPNFSHLGFGAHDHDLLLNFNNGGLPIGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPHPWRNGPNDWRPAHIYFGISGPSIATKLITQLYFEGDPLIPMCPIVKSIANPEAVQQLIAKLDMNNANPMDCLAYRFDIVLRGQRKTHFENC 538
                                   310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530        


Chain O from PDB  Type:PROTEIN  Length:238
 aligned with PCXB_PSEPU | P00437 from UniProtKB/Swiss-Prot  Length:239

    Alignment length:238
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231        
           PCXB_PSEPU     2 PAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPNFSHLGFGAHDHDLLLNFNNGGLPIGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFGISGPSIATKLITQLYFEGDPLIPMCPIVKSIANPEAVQQLIAKLDMNNANPMDCLAYRFDIVLRGQRKTHFENC 239
               SCOP domains d3mi5o_ O: Protocatechuate-3,4-dioxygenase, beta chain                                                                                                                                                                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......ee...............hhhhh........ee...hhhhhh.............................eeeeeeeeee.........eeeee.........................eeeee.....eeeeeee....eee.....eee..eeeeee........eeeeeee....hhhhh.hhhhh.hhhhhhh.eeee.hhhh.....eeee..eee..ee....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------INTRADIOL_DIOXYGENAS         ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mi5 O 301 PAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPNFSHLGFGAHDHDLLLNFNNGGLPIGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPHPWRNGPNDWRPAHIYFGISGPSIATKLITQLYFEGDPLIPMCPIVKSIANPEAVQQLIAKLDMNNANPMDCLAYRFDIVLRGQRKTHFENC 538
                                   310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530        


Chain P from PDB  Type:PROTEIN  Length:238
 aligned with PCXB_PSEPU | P00437 from UniProtKB/Swiss-Prot  Length:239

    Alignment length:238
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231        
           PCXB_PSEPU     2 PAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPNFSHLGFGAHDHDLLLNFNNGGLPIGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFGISGPSIATKLITQLYFEGDPLIPMCPIVKSIANPEAVQQLIAKLDMNNANPMDCLAYRFDIVLRGQRKTHFENC 239
               SCOP domains d3mi5p_ P: Protocatechuate-3,4-dioxygenase, beta chain                                                                                                                                                                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eee...............hhhhh........ee...hhhhhh.............................eeeeeeeeee.........eeeee.........................eeeee.....eeeeeee....eee.....eee...eeeee........eeeeeee....hhhhh.hhhhh.hhhhhhh.eeee.hhhh.....eeee..eee..eee...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------INTRADIOL_DIOXYGENAS         ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mi5 P 301 PAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPNFSHLGFGAHDHDLLLNFNNGGLPIGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPHPWRNGPNDWRPAHIYFGISGPSIATKLITQLYFEGDPLIPMCPIVKSIANPEAVQQLIAKLDMNNANPMDCLAYRFDIVLRGQRKTHFENC 538
                                   310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530        


Chain Q from PDB  Type:PROTEIN  Length:238
 aligned with PCXB_PSEPU | P00437 from UniProtKB/Swiss-Prot  Length:239

    Alignment length:238
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231        
           PCXB_PSEPU     2 PAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPNFSHLGFGAHDHDLLLNFNNGGLPIGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFGISGPSIATKLITQLYFEGDPLIPMCPIVKSIANPEAVQQLIAKLDMNNANPMDCLAYRFDIVLRGQRKTHFENC 239
               SCOP domains d3mi5q_ Q: Protocatechuate-3,4-dioxygenase, beta chain                                                                                                                                                                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......ee...............hhhhh........ee...hhhhhh.............................eeeeeeeeee.........eeeee.........................eeeee.....eeeeeee....eee.....eee..eeeeee........eeeeeee....hhhhh.hhhhh.hhhhhhh.eeee.hhhh.....eeee..eee..ee....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------INTRADIOL_DIOXYGENAS         ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mi5 Q 301 PAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPNFSHLGFGAHDHDLLLNFNNGGLPIGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPHPWRNGPNDWRPAHIYFGISGPSIATKLITQLYFEGDPLIPMCPIVKSIANPEAVQQLIAKLDMNNANPMDCLAYRFDIVLRGQRKTHFENC 538
                                   310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530        


Chain R from PDB  Type:PROTEIN  Length:238
 aligned with PCXB_PSEPU | P00437 from UniProtKB/Swiss-Prot  Length:239

    Alignment length:238
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231        
           PCXB_PSEPU     2 PAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPNFSHLGFGAHDHDLLLNFNNGGLPIGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFGISGPSIATKLITQLYFEGDPLIPMCPIVKSIANPEAVQQLIAKLDMNNANPMDCLAYRFDIVLRGQRKTHFENC 239
               SCOP domains d3mi5r_ R: Protocatechuate-3,4-dioxygenase, beta chain                                                                                                                                                                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -------PCDO_beta_N-3mi5R07 R:308-343       --Dioxygenase_C-3mi5R01 R:346-530                                                                                                                                                          -------- Pfam domains (1)
           Pfam domains (2) -------PCDO_beta_N-3mi5R08 R:308-343       --Dioxygenase_C-3mi5R02 R:346-530                                                                                                                                                          -------- Pfam domains (2)
           Pfam domains (3) -------PCDO_beta_N-3mi5R09 R:308-343       --Dioxygenase_C-3mi5R03 R:346-530                                                                                                                                                          -------- Pfam domains (3)
           Pfam domains (4) -------PCDO_beta_N-3mi5R10 R:308-343       --Dioxygenase_C-3mi5R04 R:346-530                                                                                                                                                          -------- Pfam domains (4)
           Pfam domains (5) -------PCDO_beta_N-3mi5R11 R:308-343       --Dioxygenase_C-3mi5R05 R:346-530                                                                                                                                                          -------- Pfam domains (5)
           Pfam domains (6) -------PCDO_beta_N-3mi5R12 R:308-343       --Dioxygenase_C-3mi5R06 R:346-530                                                                                                                                                          -------- Pfam domains (6)
         Sec.struct. author ......ee...............hhhhh........ee...hhhhhh.............................eeeeeeeeee.........eeeee.........................eeeee.....eeeeeee....eee.....eee..eeeeee........eeeeeee....hhhhh.hhhhh.hhhhhhh.eeee.hhhh.....eeee..eee..ee....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------INTRADIOL_DIOXYGENAS         ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mi5 R 301 PAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPNFSHLGFGAHDHDLLLNFNNGGLPIGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPHPWRNGPNDWRPAHIYFGISGPSIATKLITQLYFEGDPLIPMCPIVKSIANPEAVQQLIAKLDMNNANPMDCLAYRFDIVLRGQRKTHFENC 538
                                   310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 12)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3MI5)

(-) Pfam Domains  (2, 18)

Asymmetric Unit
(-)
Clan: Transthyretin (88)
(-)
Clan: no clan defined [family: PCDO_beta_N] (26)

(-) Gene Ontology  (13, 24)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (PCXA_PSEPU | P00436)
molecular function
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0051213    dioxygenase activity    Catalysis of an oxidation-reduction (redox) reaction in which both atoms of oxygen from one molecule of O2 are incorporated into the (reduced) product(s) of the reaction. The two atoms of oxygen may be distributed between two different products.
    GO:0008199    ferric iron binding    Interacting selectively and non-covalently with ferric iron, Fe(III).
    GO:0005506    iron ion binding    Interacting selectively and non-covalently with iron (Fe) ions.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016702    oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor.
    GO:0018578    protocatechuate 3,4-dioxygenase activity    Catalysis of the reaction: 3,4-dihydroxybenzoate + O2 = 3-carboxy-cis,cis-muconate.
biological process
    GO:0019439    aromatic compound catabolic process    The chemical reactions and pathways resulting in the breakdown of aromatic compounds, any substance containing an aromatic carbon ring.
    GO:0042952    beta-ketoadipate pathway    A pathway of aromatic compound degradation by ortho-cleavage; one branch converts protocatechuate, derived from phenolic compounds, to beta-ketoadipate, and the other branch converts catechol, generated from various aromatic hydrocarbons, amino aromatics, and lignin monomers, also to beta-ketoadipate. Two additional steps accomplish the conversion of beta-ketoadipate to tricarboxylic acid cycle intermediates.
    GO:0006725    cellular aromatic compound metabolic process    The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Chain M,N,O,P,Q,R   (PCXB_PSEPU | P00437)
molecular function
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0051213    dioxygenase activity    Catalysis of an oxidation-reduction (redox) reaction in which both atoms of oxygen from one molecule of O2 are incorporated into the (reduced) product(s) of the reaction. The two atoms of oxygen may be distributed between two different products.
    GO:0008199    ferric iron binding    Interacting selectively and non-covalently with ferric iron, Fe(III).
    GO:0005506    iron ion binding    Interacting selectively and non-covalently with iron (Fe) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016702    oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor.
    GO:0018578    protocatechuate 3,4-dioxygenase activity    Catalysis of the reaction: 3,4-dihydroxybenzoate + O2 = 3-carboxy-cis,cis-muconate.
biological process
    GO:0019619    3,4-dihydroxybenzoate catabolic process    The chemical reactions and pathways resulting in the breakdown of 3,4-dihydroxybenzoate.
    GO:0019439    aromatic compound catabolic process    The chemical reactions and pathways resulting in the breakdown of aromatic compounds, any substance containing an aromatic carbon ring.
    GO:0042952    beta-ketoadipate pathway    A pathway of aromatic compound degradation by ortho-cleavage; one branch converts protocatechuate, derived from phenolic compounds, to beta-ketoadipate, and the other branch converts catechol, generated from various aromatic hydrocarbons, amino aromatics, and lignin monomers, also to beta-ketoadipate. Two additional steps accomplish the conversion of beta-ketoadipate to tricarboxylic acid cycle intermediates.
    GO:0006725    cellular aromatic compound metabolic process    The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PCXA_PSEPU | P00436: 1ykk 1ykl 1ykm 1ykn 1yko 1ykp 2pcd 3lkt 3lmx 3lxv 3mfl 3mi1 3mv4 3mv6 3pca 3pcb 3pcc 3pcd 3pce 3pcf 3pcg 3pch 3pci 3pcj 3pck 3pcl 3pcm 3pcn 3t63 3t67 4who 4whp 4whq 4whr 4whs
        PCXB_PSEPU | P00437: 1ykk 1ykl 1ykm 1ykn 1yko 1ykp 2pcd 3lkt 3lmx 3lxv 3mfl 3mi1 3mv4 3mv6 3pca 3pcb 3pcc 3pcd 3pce 3pcf 3pcg 3pch 3pci 3pcj 3pck 3pcl 3pcm 3pcn 3t63 3t67 4who 4whp 4whq 4whr 4whs

(-) Related Entries Specified in the PDB File

3ini Y447H/H462Y HOLOENZYME
3mfl Y447H/H462Y COMPLEXED WITH HPCA