3CU7 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   HUMAN COMPLEMENT COMPONENT 5

Authors :   F. Fredslund, G. R. Andersen

Date :   16 Apr 08 (Deposition) - 10 Jun 08 (Release) - 06 Nov 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.10

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: A,B  (1x)

Keywords :   Mg Domain, Complement, Inflammation, Anaphylatoxin, Cleavage On Pair Of Basic Residues, Complement Alternate Pathway, Complement Pathway, Cytolysis, Glycoprotein, Immune Response, Inflammatory Response, Innate Immunity, Membrane Attack Complex, Secreted, Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   F. Fredslund, N. S. Laursen, P. Roversi, L. Jenner, C. L. P. Oliveira, J. S. Pedersen, M. A. Nunn, S. M. Lea, R. Discipio, L. Sottrup-Jensen, G. R. Andersen
Structure Of And Influence Of A Tick Complement Inhibitor O Human Complement Component 5
Nat. Immunol. V. 9 753 2008
PubMed-ID: 18536718 | Reference-DOI: 10.1038/NI.1625

Molecule 1 - COMPLEMENT C5
	Chains	:	A, B
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	C3 AND PZP-LIKE ALPHA-2-MACROGLOBULIN DOMAIN-CONTAINING PROTEIN 4
	Tissue	:	BLOOD

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:	A	B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 15)

No.	Name	Count	Type	Full Name
1	CD	9	Ligand/Ion	CADMIUM ION
2	NAG	6	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Biological Unit 1 (1, 3)

No.	Name	Count	Type	Full Name
1	CD	-1	Ligand/Ion	CADMIUM ION
2	NAG	3	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Biological Unit 2 (1, 3)

No.	Name	Count	Type	Full Name
1	CD	-1	Ligand/Ion	CADMIUM ION
2	NAG	3	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Biological Unit 3 (1, 6)

No.	Name	Count	Type	Full Name
1	CD	-1	Ligand/Ion	CADMIUM ION
2	NAG	6	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Asymmetric Unit (11, 11)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASN A:909 , ASN A:911 , ILE A:922	BINDING SITE FOR RESIDUE NAG A 2001
02	AC2	SOFTWARE	ASN B:909 , ASN B:911 , ILE B:922	BINDING SITE FOR RESIDUE NAG B 2001
03	AC3	SOFTWARE	GLU A:247 , GLU B:247	BINDING SITE FOR RESIDUE CD A 2004
04	AC4	SOFTWARE	ASP A:471 , HIS A:473 , GLU A:480	BINDING SITE FOR RESIDUE CD A 2005
05	AC5	SOFTWARE	ASP A:264 , HIS A:753	BINDING SITE FOR RESIDUE CD A 2006
06	AC6	SOFTWARE	GLU A:339 , GLU A:764	BINDING SITE FOR RESIDUE CD A 2007
07	AC7	SOFTWARE	GLN A:886 , HIS A:894 , ALA A:1558 , GLU A:1589	BINDING SITE FOR RESIDUE CD A 2008
08	AC8	SOFTWARE	ASP B:471 , HIS B:473 , GLU B:480	BINDING SITE FOR RESIDUE CD B 2004
09	AC9	SOFTWARE	ASP B:264 , HIS B:753	BINDING SITE FOR RESIDUE CD B 2005
10	BC1	SOFTWARE	GLU B:339 , GLU B:764	BINDING SITE FOR RESIDUE CD B 2006
11	BC2	SOFTWARE	GLU A:1666 , GLN B:886 , HIS B:894	BINDING SITE FOR RESIDUE CD B 2007

Asymmetric Unit

No.	Residues
1	A:567	-	A:810
2	A:634	-	A:669
3	A:698	-	A:724
4	A:699	-	A:731
5	A:711	-	A:732
6	A:856	-	A:883
7	A:866	-	A:1527
8	A:1101	-	A:1159
9	A:1375	-	A:1505
10	A:1405	-	A:1474
11	A:1520	-	A:1525
12	A:1532	-	A:1606
13	A:1553	-	A:1676
14	A:1654	-	A:1657
15	B:567	-	B:810
16	B:634	-	B:669
17	B:698	-	B:724
18	B:699	-	B:731
19	B:711	-	B:732
20	B:856	-	B:883
21	B:866	-	B:1527
22	B:1101	-	B:1159
23	B:1375	-	B:1505
24	B:1405	-	B:1474
25	B:1520	-	B:1525

Asymmetric Unit

No.	Residues
1	Asn A:1221	-	Pro A:1222
2	Asn B:1221	-	Pro B:1222

Asymmetric Unit (18, 36)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_038735	V	145	I	CO5_HUMAN	Polymorphism	17216529	A/B	V	145	I
02	UniProt	VAR_048822	L	354	M	CO5_HUMAN	Polymorphism	34552775	A/B	L	354	M
03	UniProt	VAR_023946	T	389	I	CO5_HUMAN	Polymorphism	---	A/B	T	389	I
04	UniProt	VAR_038736	R	449	G	CO5_HUMAN	Polymorphism	2230213	A/B	R	449	G
05	UniProt	VAR_001996	F	518	S	CO5_HUMAN	Polymorphism	---	A/B	F	518	S
06	UniProt	VAR_014574	V	802	I	CO5_HUMAN	Polymorphism	17611	A/B	I	802	I
07	UniProt	VAR_071067	R	885	C	CO5_HUMAN	Polymorphism	373359894	A/B	R	885	C
08	UniProt	VAR_071068	R	885	H	CO5_HUMAN	Polymorphism	56040400	A/B	R	885	H
09	UniProt	VAR_038737	R	928	Q	CO5_HUMAN	Polymorphism	41309892	A/B	R	928	Q
10	UniProt	VAR_038738	G	933	V	CO5_HUMAN	Polymorphism	41309902	A/B	G	933	V
11	UniProt	VAR_048823	D	966	Y	CO5_HUMAN	Polymorphism	2230212	A/B	D	966	Y
12	UniProt	VAR_038739	I	1033	T	CO5_HUMAN	Polymorphism	41311881	A/B	I	1033	T
13	UniProt	VAR_038740	D	1037	N	CO5_HUMAN	Polymorphism	41311883	A/B	D	1037	N
14	UniProt	VAR_038741	Q	1043	K	CO5_HUMAN	Polymorphism	41311887	A/B	Q	1043	K
15	UniProt	VAR_014575	M	1053	L	CO5_HUMAN	Polymorphism	17609	A/B	M	1053	L
16	UniProt	VAR_014576	S	1310	N	CO5_HUMAN	Polymorphism	17610	A/B	S	1310	N
17	UniProt	VAR_048824	V	1365	A	CO5_HUMAN	Polymorphism	16910245	A/B	V	1365	A
18	UniProt	VAR_014577	E	1437	D	CO5_HUMAN	Polymorphism	17612	A/B	E	1437	D

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (18, 18)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_038735	V	145	I	CO5_HUMAN	Polymorphism	17216529	A	V	145	I
02	UniProt	VAR_048822	L	354	M	CO5_HUMAN	Polymorphism	34552775	A	L	354	M
03	UniProt	VAR_023946	T	389	I	CO5_HUMAN	Polymorphism	---	A	T	389	I
04	UniProt	VAR_038736	R	449	G	CO5_HUMAN	Polymorphism	2230213	A	R	449	G
05	UniProt	VAR_001996	F	518	S	CO5_HUMAN	Polymorphism	---	A	F	518	S
06	UniProt	VAR_014574	V	802	I	CO5_HUMAN	Polymorphism	17611	A	I	802	I
07	UniProt	VAR_071067	R	885	C	CO5_HUMAN	Polymorphism	373359894	A	R	885	C
08	UniProt	VAR_071068	R	885	H	CO5_HUMAN	Polymorphism	56040400	A	R	885	H
09	UniProt	VAR_038737	R	928	Q	CO5_HUMAN	Polymorphism	41309892	A	R	928	Q
10	UniProt	VAR_038738	G	933	V	CO5_HUMAN	Polymorphism	41309902	A	G	933	V
11	UniProt	VAR_048823	D	966	Y	CO5_HUMAN	Polymorphism	2230212	A	D	966	Y
12	UniProt	VAR_038739	I	1033	T	CO5_HUMAN	Polymorphism	41311881	A	I	1033	T
13	UniProt	VAR_038740	D	1037	N	CO5_HUMAN	Polymorphism	41311883	A	D	1037	N
14	UniProt	VAR_038741	Q	1043	K	CO5_HUMAN	Polymorphism	41311887	A	Q	1043	K
15	UniProt	VAR_014575	M	1053	L	CO5_HUMAN	Polymorphism	17609	A	M	1053	L
16	UniProt	VAR_014576	S	1310	N	CO5_HUMAN	Polymorphism	17610	A	S	1310	N
17	UniProt	VAR_048824	V	1365	A	CO5_HUMAN	Polymorphism	16910245	A	V	1365	A
18	UniProt	VAR_014577	E	1437	D	CO5_HUMAN	Polymorphism	17612	A	E	1437	D

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (18, 18)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_038735	V	145	I	CO5_HUMAN	Polymorphism	17216529	B	V	145	I
02	UniProt	VAR_048822	L	354	M	CO5_HUMAN	Polymorphism	34552775	B	L	354	M
03	UniProt	VAR_023946	T	389	I	CO5_HUMAN	Polymorphism	---	B	T	389	I
04	UniProt	VAR_038736	R	449	G	CO5_HUMAN	Polymorphism	2230213	B	R	449	G
05	UniProt	VAR_001996	F	518	S	CO5_HUMAN	Polymorphism	---	B	F	518	S
06	UniProt	VAR_014574	V	802	I	CO5_HUMAN	Polymorphism	17611	B	I	802	I
07	UniProt	VAR_071067	R	885	C	CO5_HUMAN	Polymorphism	373359894	B	R	885	C
08	UniProt	VAR_071068	R	885	H	CO5_HUMAN	Polymorphism	56040400	B	R	885	H
09	UniProt	VAR_038737	R	928	Q	CO5_HUMAN	Polymorphism	41309892	B	R	928	Q
10	UniProt	VAR_038738	G	933	V	CO5_HUMAN	Polymorphism	41309902	B	G	933	V
11	UniProt	VAR_048823	D	966	Y	CO5_HUMAN	Polymorphism	2230212	B	D	966	Y
12	UniProt	VAR_038739	I	1033	T	CO5_HUMAN	Polymorphism	41311881	B	I	1033	T
13	UniProt	VAR_038740	D	1037	N	CO5_HUMAN	Polymorphism	41311883	B	D	1037	N
14	UniProt	VAR_038741	Q	1043	K	CO5_HUMAN	Polymorphism	41311887	B	Q	1043	K
15	UniProt	VAR_014575	M	1053	L	CO5_HUMAN	Polymorphism	17609	B	M	1053	L
16	UniProt	VAR_014576	S	1310	N	CO5_HUMAN	Polymorphism	17610	B	S	1310	N
17	UniProt	VAR_048824	V	1365	A	CO5_HUMAN	Polymorphism	16910245	B	V	1365	A
18	UniProt	VAR_014577	E	1437	D	CO5_HUMAN	Polymorphism	17612	B	E	1437	D

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 3 (18, 36)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_038735	V	145	I	CO5_HUMAN	Polymorphism	17216529	A/B	V	145	I
02	UniProt	VAR_048822	L	354	M	CO5_HUMAN	Polymorphism	34552775	A/B	L	354	M
03	UniProt	VAR_023946	T	389	I	CO5_HUMAN	Polymorphism	---	A/B	T	389	I
04	UniProt	VAR_038736	R	449	G	CO5_HUMAN	Polymorphism	2230213	A/B	R	449	G
05	UniProt	VAR_001996	F	518	S	CO5_HUMAN	Polymorphism	---	A/B	F	518	S
06	UniProt	VAR_014574	V	802	I	CO5_HUMAN	Polymorphism	17611	A/B	I	802	I
07	UniProt	VAR_071067	R	885	C	CO5_HUMAN	Polymorphism	373359894	A/B	R	885	C
08	UniProt	VAR_071068	R	885	H	CO5_HUMAN	Polymorphism	56040400	A/B	R	885	H
09	UniProt	VAR_038737	R	928	Q	CO5_HUMAN	Polymorphism	41309892	A/B	R	928	Q
10	UniProt	VAR_038738	G	933	V	CO5_HUMAN	Polymorphism	41309902	A/B	G	933	V
11	UniProt	VAR_048823	D	966	Y	CO5_HUMAN	Polymorphism	2230212	A/B	D	966	Y
12	UniProt	VAR_038739	I	1033	T	CO5_HUMAN	Polymorphism	41311881	A/B	I	1033	T
13	UniProt	VAR_038740	D	1037	N	CO5_HUMAN	Polymorphism	41311883	A/B	D	1037	N
14	UniProt	VAR_038741	Q	1043	K	CO5_HUMAN	Polymorphism	41311887	A/B	Q	1043	K
15	UniProt	VAR_014575	M	1053	L	CO5_HUMAN	Polymorphism	17609	A/B	M	1053	L
16	UniProt	VAR_014576	S	1310	N	CO5_HUMAN	Polymorphism	17610	A/B	S	1310	N
17	UniProt	VAR_048824	V	1365	A	CO5_HUMAN	Polymorphism	16910245	A/B	V	1365	A
18	UniProt	VAR_014577	E	1437	D	CO5_HUMAN	Polymorphism	17612	A/B	E	1437	D

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (3, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ANAPHYLATOXIN_1	PS01177	Anaphylatoxin domain signature.	CO5_HUMAN	698-732	2	A:698-732 B:698-732
2	ANAPHYLATOXIN_2	PS01178	Anaphylatoxin domain profile.	CO5_HUMAN	698-732	2	A:698-732 B:698-732
3	NTR	PS50189	NTR domain profile.	CO5_HUMAN	1532-1676	2	A:1532-1676 B:1532-1532

Biological Unit 1 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ANAPHYLATOXIN_1	PS01177	Anaphylatoxin domain signature.	CO5_HUMAN	698-732	1	A:698-732 -
2	ANAPHYLATOXIN_2	PS01178	Anaphylatoxin domain profile.	CO5_HUMAN	698-732	1	A:698-732 -
3	NTR	PS50189	NTR domain profile.	CO5_HUMAN	1532-1676	1	A:1532-1676 -

Biological Unit 2 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ANAPHYLATOXIN_1	PS01177	Anaphylatoxin domain signature.	CO5_HUMAN	698-732	1	- B:698-732
2	ANAPHYLATOXIN_2	PS01178	Anaphylatoxin domain profile.	CO5_HUMAN	698-732	1	- B:698-732
3	NTR	PS50189	NTR domain profile.	CO5_HUMAN	1532-1676	1	- B:1532-1532

Biological Unit 3 (3, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ANAPHYLATOXIN_1	PS01177	Anaphylatoxin domain signature.	CO5_HUMAN	698-732	2	A:698-732 B:698-732
2	ANAPHYLATOXIN_2	PS01178	Anaphylatoxin domain profile.	CO5_HUMAN	698-732	2	A:698-732 B:698-732
3	NTR	PS50189	NTR domain profile.	CO5_HUMAN	1532-1676	2	A:1532-1676 B:1532-1532

Asymmetric Unit (41, 79)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.2	ENST00000223642	2	ENSE00000806456	chr9:123812554-123812460	95	CO5_HUMAN	1-22	22	2	A:20-22 B:20-22	3 3
1.3	ENST00000223642	3	ENSE00000724393	chr9:123808661-123808469	193	CO5_HUMAN	22-86	65	2	A:22-86 B:22-86	65 65
1.4	ENST00000223642	4	ENSE00000724389	chr9:123805444-123805282	163	CO5_HUMAN	87-141	55	2	A:87-141 B:87-141	55 55
1.5	ENST00000223642	5	ENSE00000724383	chr9:123800229-123800159	71	CO5_HUMAN	141-164	24	2	A:141-164 B:141-164	24 24
1.6a	ENST00000223642	6a	ENSE00000724378	chr9:123797172-123797081	92	CO5_HUMAN	165-195	31	2	A:165-195 B:165-195	31 31
1.7	ENST00000223642	7	ENSE00000724375	chr9:123794473-123794391	83	CO5_HUMAN	195-223	29	2	A:195-223 B:195-223	29 29
1.8	ENST00000223642	8	ENSE00000724372	chr9:123792765-123792675	91	CO5_HUMAN	223-253	31	2	A:223-253 B:223-253	31 31
1.9	ENST00000223642	9	ENSE00000724368	chr9:123789552-123789438	115	CO5_HUMAN	253-291	39	2	A:253-291 B:253-291	39 39
1.11	ENST00000223642	11	ENSE00000724364	chr9:123787858-123787732	127	CO5_HUMAN	292-334	43	2	A:292-334 B:292-334	43 43
1.12	ENST00000223642	12	ENSE00000806455	chr9:123785797-123785682	116	CO5_HUMAN	334-372	39	2	A:334-372 B:334-372	39 39
1.13	ENST00000223642	13	ENSE00000724360	chr9:123783972-123783787	186	CO5_HUMAN	373-434	62	2	A:373-434 B:373-434	62 62
1.14	ENST00000223642	14	ENSE00000724358	chr9:123782457-123782254	204	CO5_HUMAN	435-502	68	2	A:435-502 B:435-502	68 68
1.15	ENST00000223642	15	ENSE00000724356	chr9:123780130-123779921	210	CO5_HUMAN	503-572	70	2	A:503-572 B:503-572	70 70
1.16	ENST00000223642	16	ENSE00000724353	chr9:123779789-123779640	150	CO5_HUMAN	573-622	50	2	A:573-622 B:573-622	50 50
1.17	ENST00000223642	17	ENSE00000724350	chr9:123778661-123778532	130	CO5_HUMAN	623-666	44	2	A:623-666 B:623-666	44 44
1.18	ENST00000223642	18	ENSE00000724347	chr9:123777539-123777477	63	CO5_HUMAN	666-687	22	2	A:666-687 (gaps) B:666-687 (gaps)	22 22
1.19	ENST00000223642	19	ENSE00000724343	chr9:123776348-123776151	198	CO5_HUMAN	687-753	67	2	A:687-753 (gaps) B:687-753 (gaps)	67 67
1.20	ENST00000223642	20	ENSE00000724339	chr9:123770776-123770686	91	CO5_HUMAN	753-783	31	2	A:753-783 B:753-783	31 31
1.21a	ENST00000223642	21a	ENSE00000724335	chr9:123769255-123769182	74	CO5_HUMAN	783-808	26	2	A:783-808 B:783-808	26 26
1.22	ENST00000223642	22	ENSE00000724332	chr9:123768336-123768197	140	CO5_HUMAN	808-854	47	2	A:808-854 B:808-854	47 47
1.24	ENST00000223642	24	ENSE00000724329	chr9:123760052-123759825	228	CO5_HUMAN	855-930	76	2	A:855-930 (gaps) B:855-930 (gaps)	76 76
1.25	ENST00000223642	25	ENSE00000724327	chr9:123758578-123758518	61	CO5_HUMAN	931-951	21	2	A:931-951 B:931-951	21 21
1.26	ENST00000223642	26	ENSE00000724325	chr9:123753558-123753469	90	CO5_HUMAN	951-981	31	2	A:951-981 B:951-981	31 31
1.27b	ENST00000223642	27b	ENSE00000724322	chr9:123752058-123751846	213	CO5_HUMAN	981-1052	72	2	A:981-1052 B:981-1052	72 72
1.28	ENST00000223642	28	ENSE00000724320	chr9:123751399-123751324	76	CO5_HUMAN	1052-1077	26	2	A:1052-1077 B:1052-1077	26 26
1.29	ENST00000223642	29	ENSE00000724317	chr9:123745092-123744933	160	CO5_HUMAN	1077-1130	54	2	A:1077-1130 B:1077-1130	54 54
1.30a	ENST00000223642	30a	ENSE00000724315	chr9:123744217-123744122	96	CO5_HUMAN	1131-1162	32	2	A:1131-1162 B:1131-1162	32 32
1.31	ENST00000223642	31	ENSE00000724313	chr9:123742532-123742361	172	CO5_HUMAN	1163-1220	58	2	A:1163-1220 B:1163-1220	58 58
1.33	ENST00000223642	33	ENSE00000724312	chr9:123739183-123738978	206	CO5_HUMAN	1220-1288	69	2	A:1220-1288 B:1220-1288	69 69
1.34	ENST00000223642	34	ENSE00000724311	chr9:123737209-123737057	153	CO5_HUMAN	1289-1339	51	2	A:1289-1339 B:1289-1339	51 51
1.35	ENST00000223642	35	ENSE00000724308	chr9:123734270-123734208	63	CO5_HUMAN	1340-1360	21	2	A:1340-1360 B:1340-1360	21 21
1.36	ENST00000223642	36	ENSE00000724304	chr9:123732529-123732448	82	CO5_HUMAN	1361-1388	28	2	A:1361-1386 B:1361-1386	26 26
1.37	ENST00000223642	37	ENSE00000724301	chr9:123731396-123731339	58	CO5_HUMAN	1388-1407	20	2	A:1399-1407 B:1399-1407	9 9
1.38	ENST00000223642	38	ENSE00000724299	chr9:123726016-123725914	103	CO5_HUMAN	1407-1441	35	2	A:1407-1441 B:1407-1441	35 35
1.39	ENST00000223642	39	ENSE00000724298	chr9:123725245-123725171	75	CO5_HUMAN	1442-1466	25	2	A:1442-1466 B:1442-1466	25 25
1.40a	ENST00000223642	40a	ENSE00000724295	chr9:123725054-123724949	106	CO5_HUMAN	1467-1502	36	2	A:1467-1502 B:1467-1502	36 36
1.41	ENST00000223642	41	ENSE00000724292	chr9:123723843-123723760	84	CO5_HUMAN	1502-1530	29	2	A:1502-1530 B:1502-1530	29 29
1.42	ENST00000223642	42	ENSE00000724291	chr9:123722615-123722526	90	CO5_HUMAN	1530-1560	31	2	A:1530-1560 B:1530-1532	31 3
1.43a	ENST00000223642	43a	ENSE00000724290	chr9:123719646-123719563	84	CO5_HUMAN	1560-1588	29	1	A:1560-1588 -	29 -
1.44	ENST00000223642	44	ENSE00000724289	chr9:123716146-123716008	139	CO5_HUMAN	1588-1634	47	1	A:1588-1634 -	47 -
1.45	ENST00000223642	45	ENSE00000806454	chr9:123715146-123714616	531	CO5_HUMAN	1634-1676	43	1	A:1634-1676 -	43 -

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:1625
 aligned with CO5_HUMAN | P01031 from UniProtKB/Swiss-Prot  Length:1676

    Alignment length:1657
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699       709       719       729       739       749       759       769       779       789       799       809       819       829       839       849       859       869       879       889       899       909       919       929       939       949       959       969       979       989       999      1009      1019      1029      1039      1049      1059      1069      1079      1089      1099      1109      1119      1129      1139      1149      1159      1169      1179      1189      1199      1209      1219      1229      1239      1249      1259      1269      1279      1289      1299      1309      1319      1329      1339      1349      1359      1369      1379      1389      1399      1409      1419      1429      1439      1449      1459      1469      1479      1489      1499      1509      1519      1529      1539      1549      1559      1569      1579      1589      1599      1609      1619      1629      1639      1649      1659      1669       
           CO5_HUMAN     20 EQTYVISAPKIFRVGASENIVIQVYGYTEAFDATISIKSYPDKKFSYSSGHVHLSSENKFQNSAILTIQPKQLPGGQNPVSYVYLEVVSKHFSKSKRMPITYDNGFLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKEDFSTTGTAYFEVKEYVLPHFSVSIEPEYNFIGYKNFKNFEITIKARYFYNKVVTEADVYITFGIREDLKDDQKEMMQTAMQNTMLINGIAQVTFDSETAVKELSYYSLEDLNNKYLYIAVTVIESTGGFSEEAEIPGIKYVLSPYKLNLVATPLFLKPGIPYPIKVQVKDSLDQLVGGVPVTLNAQTIDVNQETSDLDPSKSVTRVDDGVASFVLNLPSGVTVLEFNVKTDAPDLPEENQAREGYRAIAYSSLSQSYLYIDWTDNHKALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDASYQSINIPVTQNMVPSSRLLVYYIVTGEQTAELVSDSVWLNIEEKCGNQLQVHLSPDADAYSPGQTVSLNMATGMDSWVALAAVDSAVYGVQRGAKKPLERVFQFLEKSDLGCGAGGGLNNANVFHLAGLTFLTNANADDSQENDEPCKEILRPRRTLQKKIEEIAAKYKHSVVKKCCYDGACVNNDETCEQRAARISLGPRCIKAFTECCVVASQLRANISHKDMQLGRLHMKTLLPVSKPEIRSYFPESWLWEVHLVPRRKQLQFALPDSLTTWEIQGVGISNTGICVADTVKAKVFKDVFLEMNIPYSVVRGEQIQLKGTVYNYRTSGMQFCVKMSAVEGICTSESPVIDHQGTKSSKCVRQKVEGSSSHLVTFTVLPLEIGLHNINFSLETWFGKEILVKTLRVVPEGVKRESYSGVTLDPRGIYGTISRRKEFPYRIPLDLVPKTEIKRILSVKGLLVGEILSAVLSQEGINILTHLPKGSAEAELMSVVPVFYVFHYLETGNHWNIFHSDPLIEKQKLKKKLKEGMLSIMSYRNADYSYSVWKGGSASTWLTAFALRVLGQVNKYVEQNQNSICNSLLWLVENYQLDNGSFKENSQYQPIKLQGTLPVEARENSLYLTAFTVIGIRKAFDICPLVKIDTALIKADNFLLENTLPAQSTFTLAISAYALSLGDKTHPQFRSIVSALKREALVKGNPPIYRFWKDNLQHKDSSVPNTGTARMVETTAYALLTSLNLKDINYVNPVIKWLSEEQRYGGGFYSTQDTINAIEGLTEYSLLVKQLRLSMDIDVSYKHKGALHNYKMTDKNFLGRPVEVLLNDDLIVSTGFGSGLATVHVTTVVHKTSTSEEVCSFYLKIDTQDIEASHYRGYGNSDYKRIVACASYKPSREESSSGSSHAVMDISLPTGISANEEDLKALVEGVDQLFTDYQIKDGHVILQLNSIPSSDFLCVRFRIFELFEVGFLSPATFTVYEYHRPDKQCTMFYSTSNIKIQKVCEGAACKCVEADCGQMQEELDLTISAETRKQTACKPEIAYAYKVSITSITVENVFVKYKATLLDIYKTGEAVAEKDSEITFIKKVTCTNAELVKGRQYLIMGKEALQIKYNFSFRYIYPLDSLTWIEYWPRDTTCSSCQAFLANLDEFAEDIFLNGC 1676
               SCOP domains d3cu7a1 A:20-120 Complement C5 MG1                                                                   d3cu7a2 A:121-222 Complement C5 MG2                                                                   d3cu7a3 A:223-348 Complement C5 MG3                                                                                           d3cu7a4 A:349-458 Complement C5 MG4                                                                           d3cu7a5 A:459-564 Complement C5 MG5                                                                       d3cu7a6 A:565-606,A:770-822               d3cu7a9 A:607-673 Complement C5 linker domain                           d3cu7aa A:679-743 C5a anaphylotoxin                                   d3cu7ab A:749-769    d3cu7a6 A:565-606,A:770-822 Complement C5 MG6        d3cu7a7 A:823-931 Complement C5 MG7                                                                          d3cu7ad A:932-981,A:1307-1369                     d3cu7ae A:982-1306 Thio-ester containing domain (TED) from Complement C5                                                                                                                                                                                                                                                             d3cu7ad A:932-981,A:1307-1369 Complement C5 CUB domain         d3cu7a8 A:1370-15            13 Complement C5 MG8                                                                                               d3cu7ac    d3cu7af A:1525-1676 Complement C5 domain                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee..ee....ee..eee........eeeeeee..eeeee..............ee..ee................eeeeeee...eeeeee.ee....eeeeee...ee....ee.eeeeee..........eeeeee.........eee.....eee...ee.......eeeeeeee.......eeeeeeee.ee.....ee..ee...ee........eeee.eee...ee..eeeeeeeeeee........eee........ee...eeee.....................eeeeeeeeee......eeeee...ee....eee.......ee.....eeeeeeeee.........eeeeeeeeee....eee...eeee......eeeeee.....eeeeeeeeee.....hhhhh.eeeeeeee.........eeee...........eeeeeee..........eeeeeeee..eeeeeeeee.......eeeeee.hhhhh.eeeeeeeeee......eeeeeeeeee...........ee...........eeeeeee....eeeee..ee............hhhhhhhhh..............hhhhhhhh.eeee...................-----.hhhhhhhhhh..hhhhhhhhhhhhh.....hhhhhhhh......hhhhhhhhhhhhhhhhh...-----...............ee...........eeee..eeeeeee.....eeeee.eeeee..eeee...eeeee...eeeeee....ee....eeeeeeeee..........ee.....ee.....----------..........eeee..eeeee.......eeeeeee..eeeeeee...ee...eeeeeeeeeee............eee..............eeeeeee...hhhhhhhhhh..............hhhhhh.hhhhhhhhhhhhhh.hhhhh..hhhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh....................hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.....hhhhhhhhhhhhhhheee.....eee................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh..........eee....................ee......eee........eeeeeeeeee..........eeeeeeee..------------..eeeeeeee.............eeeeee.....eehhhhhhhhhh..........ee..eeeeee........eeeeeeee..........eeeeeee..eeeeeeeeee..............hhhhhh...................hhhhhh....eeeeeeeee........eeeeeeeeeee...........eeee................eeee....................................hhhhhh.hhhhhhhh.... Sec.struct. author
             SAPs(SNPs) (1) -----------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M----------------------------------I-----------------------------------------------------------G--------------------------------------------------------------------S-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------C------------------------------------------Q----V--------------------------------Y------------------------------------------------------------------T---N-----K---------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N------------------------------------------------------A-----------------------------------------------------------------------D----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------H----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                PROSITE (1) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANAPHYLATOXIN_2  PDB: A:698-732    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NTR  PDB: A:1532-1676 UniProt: 1532-1676                                                                                                          PROSITE (1)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANAPHYLATOXIN_1  PDB: A:698-732    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) 1.2----------------------------------------------------------------Exon 1.4  PDB: A:87-141 UniProt: 87-141                -----------------------Exon 1.6a  PDB: A:165-195      ---------------------------Exon 1.8  PDB: A:223-253       --------------------------------------Exon 1.11  PDB: A:292-334 UniProt: 292-334 --------------------------------------Exon 1.13  PDB: A:373-434 UniProt: 373-434                    Exon 1.14  PDB: A:435-502 UniProt: 435-502                          Exon 1.15  PDB: A:503-572 UniProt: 503-572                            Exon 1.16  PDB: A:573-622 UniProt: 573-622        Exon 1.17  PDB: A:623-666 UniProt: 623-666  --------------------Exon 1.19  PDB: A:687-753 (gaps) UniProt: 687-753                  -----------------------------Exon 1.21a  PDB: A:783-808----------------------------------------------Exon 1.24  PDB: A:855-930 (gaps) UniProt: 855-930                           Exon 1.25            -----------------------------Exon 1.27b  PDB: A:981-1052 UniProt: 981-1052                           ------------------------Exon 1.29  PDB: A:1077-1130 UniProt: 1077-1130        Exon 1.30a  PDB: A:1131-1162    Exon 1.31  PDB: A:1163-1220 UniProt: 1163-1220            --------------------------------------------------------------------Exon 1.34  PDB: A:1289-1339 UniProt: 1289-1339     Exon 1.35            Exon 1.36  PDB: A:1361-1386 ------------------Exon 1.38  PDB: A:1407-1441        Exon 1.39                Exon 1.40a  PDB: A:1467-1502        ---------------------------Exon 1.42  PDB: A:1530-1560    ---------------------------Exon 1.44  PDB: A:1588-1634 UniProt: 1588-1634 ------------------------------------------ Transcript 1 (1)
           Transcript 1 (2) --Exon 1.3  PDB: A:22-86 UniProt: 22-86                            ------------------------------------------------------Exon 1.5  PDB: A:141-164------------------------------Exon 1.7  PDB: A:195-223     -----------------------------Exon 1.9  PDB: A:253-291               ------------------------------------------Exon 1.12  PDB: A:334-372              -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.18             -----------------------------------------------------------------Exon 1.20  PDB: A:753-783      ------------------------Exon 1.22  PDB: A:808-854 UniProt: 808-854     ------------------------------------------------------------------------------------------------Exon 1.26  PDB: A:951-981      ----------------------------------------------------------------------Exon 1.28  PDB: A:1052-107----------------------------------------------------------------------------------------------------------------------------------------------Exon 1.33  PDB: A:1220-1288 UniProt: 1220-1288                       ---------------------------------------------------------------------------------------------------Exon 1.37           ----------------------------------------------------------------------------------------------Exon 1.41  PDB: A:1502-1530  -----------------------------Exon 1.43a  PDB: A:1560-1588 ---------------------------------------------Exon 1.45  PDB: A:1634-1676                 Transcript 1 (2)
                3cu7 A   20 EQTYVISAPKIFRVGASENIVIQVYGYTEAFDATISIKSYPDKKFSYSSGHVHLSSENKFQNSAILTIQPKQLPGGQNPVSYVYLEVVSKHFSKSKRMPITYDNGFLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKEDFSTTGTAYFEVKEYVLPHFSVSIEPEYNFIGYKNFKNFEITIKARYFYNKVVTEADVYITFGIREDLKDDQKEMMQTAMQNTMLINGIAQVTFDSETAVKELSYYSLEDLNNKYLYIAVTVIESTGGFSEEAEIPGIKYVLSPYKLNLVATPLFLKPGIPYPIKVQVKDSLDQLVGGVPVTLNAQTIDVNQETSDLDPSKSVTRVDDGVASFVLNLPSGVTVLEFNVKTDAPDLPEENQAREGYRAIAYSSLSQSYLYIDWTDNHKALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDASYQSINIPVTQNMVPSSRLLVYYIVTGEQTAELVSDSVWLNIEEKCGNQLQVHLSPDADAYSPGQTVSLNMATGMDSWVALAAVDSAVYGVQRGAKKPLERVFQFLEKSDLGCGAGGGLNNANVFHLAGLTFLTNANADDSQENDEPCKEIL-----LQKKIEEIAAKYKHSVVKKCCYDGACVNNDETCEQRAARISLGPRCIKAFTECCVVASQLRANIS-----LGRLHMKTLLPVSKPEIRSYFPESWLWEVHLVPRRKQLQFALPDSLTTWEIQGIGISNTGICVADTVKAKVFKDVFLEMNIPYSVVRGEQIQLKGTVYNYRTSGMQFCVKMSAVEGICTSESP----------KCVRQKVEGSSSHLVTFTVLPLEIGLHNINFSLETWFGKEILVKTLRVVPEGVKRESYSGVTLDPRGIYGTISRRKEFPYRIPLDLVPKTEIKRILSVKGLLVGEILSAVLSQEGINILTHLPKGSAEAELMSVVPVFYVFHYLETGNHWNIFHSDPLIEKQKLKKKLKEGMLSIMSYRNADYSYSVWKGGSASTWLTAFALRVLGQVNKYVEQNQNSICNSLLWLVENYQLDNGSFKENSQYQPIKLQGTLPVEARENSLYLTAFTVIGIRKAFDICPLVKIDTALIKADNFLLENTLPAQSTFTLAISAYALSLGDKTHPQFRSIVSALKREALVKGNPPIYRFWKDNLQHKDSSVPNTGTARMVETTAYALLTSLNLKDINYVNPVIKWLSEEQRYGGGFYSTQDTINAIEGLTEYSLLVKQLRLSMDIDVSYKHKGALHNYKMTDKNFLGRPVEVLLNDDLIVSTGFGSGLATVHVTTVVHKTSTSEEVCSFYLKIDTQDI------------YKRIVACASYKPSREESSSGSSHAVMDISLPTGISANEEDLKALVEGVDQLFTDYQIKDGHVILQLNSIPSSDFLCVRFRIFELFEVGFLSPATFTVYEYHRPDKQCTMFYSTSNIKIQKVCEGAACKCVEADCGQMQEELDLTISAETRKQTACKPEIAYAYKVSITSITVENVFVKYKATLLDIYKTGEAVAEKDSEITFIKKVTCTNAELVKGRQYLIMGKEALQIKYNFSFRYIYPLDSLTWIEYWPRDTTCSSCQAFLANLDEFAEDIFLNGC 1676
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669   |   679       689       699       709       719       729       739   |   749       759       769       779       789       799       809       819       829       839       849       859       869 |       -  |    889       899       909       919       929       939       949       959       969       979       989       999      1009      1019      1029      1039      1049      1059      1069      1079      1089      1099      1109      1119      1129      1139      1149      1159      1169      1179      1189      1199      1209      1219      1229      1239      1249      1259      1269      1279      1289      1299      1309      1319      1329      1339      1349      1359      1369      1379      |  -      1399      1409      1419      1429      1439      1449      1459      1469      1479      1489      1499      1509      1519      1529      1539      1549      1559      1569      1579      1589      1599      1609      1619      1629      1639      1649      1659      1669       
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       673   679                                                             743   749                                                                                                                       871        882                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    1386         1399

Chain B from PDB  Type:PROTEIN  Length:1481
 aligned with CO5_HUMAN | P01031 from UniProtKB/Swiss-Prot  Length:1676

    Alignment length:1513
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699       709       719       729       739       749       759       769       779       789       799       809       819       829       839       849       859       869       879       889       899       909       919       929       939       949       959       969       979       989       999      1009      1019      1029      1039      1049      1059      1069      1079      1089      1099      1109      1119      1129      1139      1149      1159      1169      1179      1189      1199      1209      1219      1229      1239      1249      1259      1269      1279      1289      1299      1309      1319      1329      1339      1349      1359      1369      1379      1389      1399      1409      1419      1429      1439      1449      1459      1469      1479      1489      1499      1509      1519      1529   
           CO5_HUMAN     20 EQTYVISAPKIFRVGASENIVIQVYGYTEAFDATISIKSYPDKKFSYSSGHVHLSSENKFQNSAILTIQPKQLPGGQNPVSYVYLEVVSKHFSKSKRMPITYDNGFLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKEDFSTTGTAYFEVKEYVLPHFSVSIEPEYNFIGYKNFKNFEITIKARYFYNKVVTEADVYITFGIREDLKDDQKEMMQTAMQNTMLINGIAQVTFDSETAVKELSYYSLEDLNNKYLYIAVTVIESTGGFSEEAEIPGIKYVLSPYKLNLVATPLFLKPGIPYPIKVQVKDSLDQLVGGVPVTLNAQTIDVNQETSDLDPSKSVTRVDDGVASFVLNLPSGVTVLEFNVKTDAPDLPEENQAREGYRAIAYSSLSQSYLYIDWTDNHKALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDASYQSINIPVTQNMVPSSRLLVYYIVTGEQTAELVSDSVWLNIEEKCGNQLQVHLSPDADAYSPGQTVSLNMATGMDSWVALAAVDSAVYGVQRGAKKPLERVFQFLEKSDLGCGAGGGLNNANVFHLAGLTFLTNANADDSQENDEPCKEILRPRRTLQKKIEEIAAKYKHSVVKKCCYDGACVNNDETCEQRAARISLGPRCIKAFTECCVVASQLRANISHKDMQLGRLHMKTLLPVSKPEIRSYFPESWLWEVHLVPRRKQLQFALPDSLTTWEIQGVGISNTGICVADTVKAKVFKDVFLEMNIPYSVVRGEQIQLKGTVYNYRTSGMQFCVKMSAVEGICTSESPVIDHQGTKSSKCVRQKVEGSSSHLVTFTVLPLEIGLHNINFSLETWFGKEILVKTLRVVPEGVKRESYSGVTLDPRGIYGTISRRKEFPYRIPLDLVPKTEIKRILSVKGLLVGEILSAVLSQEGINILTHLPKGSAEAELMSVVPVFYVFHYLETGNHWNIFHSDPLIEKQKLKKKLKEGMLSIMSYRNADYSYSVWKGGSASTWLTAFALRVLGQVNKYVEQNQNSICNSLLWLVENYQLDNGSFKENSQYQPIKLQGTLPVEARENSLYLTAFTVIGIRKAFDICPLVKIDTALIKADNFLLENTLPAQSTFTLAISAYALSLGDKTHPQFRSIVSALKREALVKGNPPIYRFWKDNLQHKDSSVPNTGTARMVETTAYALLTSLNLKDINYVNPVIKWLSEEQRYGGGFYSTQDTINAIEGLTEYSLLVKQLRLSMDIDVSYKHKGALHNYKMTDKNFLGRPVEVLLNDDLIVSTGFGSGLATVHVTTVVHKTSTSEEVCSFYLKIDTQDIEASHYRGYGNSDYKRIVACASYKPSREESSSGSSHAVMDISLPTGISANEEDLKALVEGVDQLFTDYQIKDGHVILQLNSIPSSDFLCVRFRIFELFEVGFLSPATFTVYEYHRPDKQCTMFYSTSNIKIQKVCEGAACKCVEADC 1532
               SCOP domains d3cu7b1 B:20-120 Complement C5 MG1                                                                   d3cu7b2 B:121-222 Complement C5 MG2                                                                   d3cu7b3 B:223-348 Complement C5 MG3                                                                                           d3cu7b4 B:349-458 Complement C5 MG4                                                                           d3cu7b5 B:459-564 Complement C5 MG5                                                                       d3cu7b6 B:565-606,B:770-822               d3cu7b9 B:607-673 Complement C5 linker domain                           d3cu7ba B:679-743 C5a anaphylotoxin                                   d3cu7bb B:749-769    d3cu7b6 B:565-606,B:770-822 Complement C5 MG6        d3cu7b7 B:823-931 Complement C5 MG7                                                                          d3cu7bd B:932-981,B:1307-1369                     d3cu7be B:982-1306 Thio-ester containing domain (TED) from Complement C5                                                                                                                                                                                                                                                             d3cu7bd B:932-981,B:1307-1369 Complement C5 CUB domain         d3cu7b8 B:1370-15            13 Complement C5 MG8                                                                                               d3cu7bc B:1514-1532 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee..ee....ee..eee........eeeeeee..eeeee..............ee..ee................eeeeeee...eeeeee.ee....eeeeee...ee....ee.eeeeee..........eeeeee.........eee.....eee...ee.......eeeeeeee.......eeeeeeee.ee.....ee..ee...ee........eeee.eee...ee..eeeeeeeeeee........eee........ee...eeee.....................eeeeeeeeee......eeeee...ee....eee.......ee.....eeeeeeeee.........eeeeeeeeee....eee...eeee......eeeeee.....eeeeeeeeee.....hhhhh.eeeeeeee.........eeee...........eeeeeee..........eeeeeeee..eeeeeeeee.......eeeeee.hhhhh.eeeeeeeeee......eeeeeeeeee...........ee...........eeeeeee....eeeee..ee............hhhhhhhhh..............hhhhhhhh.eeee...................-----.hhhhhhhhhh..hhhhhhhhhhhhh.....hhhhhhhh......hhhhhhhhhhhhhhhhh...-----...............ee...........eeee..eeeeeee.....eeeee.eeeee..eeee...eeeee...eeeeee....ee....eeeeeeeee..........ee.....ee.....----------..........eeee..eeeee.......eeeeeee..eeeeeee...ee...eeeeeeeeeee............eee..............eeeeeee...hhhhhhhhhh..............hhhhhh.hhhhhhhhhhhhhh.hhhhh..hhhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh....................hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.....hhhhhhhhhhhhhhheee.....eee................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh..........eee....................ee......eee........eeeeeeeeee..........eeeeeeee..------------..eeeeeeee.............eeeeee.....eehhhhhhhhhh..........ee..eeeeee........eeeeeeee..........eeeeeee..eeeeeeeeee....................... Sec.struct. author
             SAPs(SNPs) (1) -----------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M----------------------------------I-----------------------------------------------------------G--------------------------------------------------------------------S-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------C------------------------------------------Q----V--------------------------------Y------------------------------------------------------------------T---N-----K---------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N------------------------------------------------------A-----------------------------------------------------------------------D----------------------------------------------------------------------------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------H----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                PROSITE (1) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANAPHYLATOXIN_2  PDB: B:698-732    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N PROSITE (1)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANAPHYLATOXIN_1  PDB: B:698-732    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) 1.2----------------------------------------------------------------Exon 1.4  PDB: B:87-141 UniProt: 87-141                -----------------------Exon 1.6a  PDB: B:165-195      ---------------------------Exon 1.8  PDB: B:223-253       --------------------------------------Exon 1.11  PDB: B:292-334 UniProt: 292-334 --------------------------------------Exon 1.13  PDB: B:373-434 UniProt: 373-434                    Exon 1.14  PDB: B:435-502 UniProt: 435-502                          Exon 1.15  PDB: B:503-572 UniProt: 503-572                            Exon 1.16  PDB: B:573-622 UniProt: 573-622        Exon 1.17  PDB: B:623-666 UniProt: 623-666  --------------------Exon 1.19  PDB: B:687-753 (gaps) UniProt: 687-753                  -----------------------------Exon 1.21a  PDB: B:783-808----------------------------------------------Exon 1.24  PDB: B:855-930 (gaps) UniProt: 855-930                           Exon 1.25            -----------------------------Exon 1.27b  PDB: B:981-1052 UniProt: 981-1052                           ------------------------Exon 1.29  PDB: B:1077-1130 UniProt: 1077-1130        Exon 1.30a  PDB: B:1131-1162    Exon 1.31  PDB: B:1163-1220 UniProt: 1163-1220            --------------------------------------------------------------------Exon 1.34  PDB: B:1289-1339 UniProt: 1289-1339     Exon 1.35            Exon 1.36  PDB: B:1361-1386 ------------------Exon 1.38  PDB: B:1407-1441        Exon 1.39                Exon 1.40a  PDB: B:1467-1502        ---------------------------1.4 Transcript 1 (1)
           Transcript 1 (2) --Exon 1.3  PDB: B:22-86 UniProt: 22-86                            ------------------------------------------------------Exon 1.5  PDB: B:141-164------------------------------Exon 1.7  PDB: B:195-223     -----------------------------Exon 1.9  PDB: B:253-291               ------------------------------------------Exon 1.12  PDB: B:334-372              -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.18             -----------------------------------------------------------------Exon 1.20  PDB: B:753-783      ------------------------Exon 1.22  PDB: B:808-854 UniProt: 808-854     ------------------------------------------------------------------------------------------------Exon 1.26  PDB: B:951-981      ----------------------------------------------------------------------Exon 1.28  PDB: B:1052-107----------------------------------------------------------------------------------------------------------------------------------------------Exon 1.33  PDB: B:1220-1288 UniProt: 1220-1288                       ---------------------------------------------------------------------------------------------------Exon 1.37           ----------------------------------------------------------------------------------------------Exon 1.41  PDB: B:1502-1530  -- Transcript 1 (2)
                3cu7 B   20 EQTYVISAPKIFRVGASENIVIQVYGYTEAFDATISIKSYPDKKFSYSSGHVHLSSENKFQNSAILTIQPKQLPGGQNPVSYVYLEVVSKHFSKSKRMPITYDNGFLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKEDFSTTGTAYFEVKEYVLPHFSVSIEPEYNFIGYKNFKNFEITIKARYFYNKVVTEADVYITFGIREDLKDDQKEMMQTAMQNTMLINGIAQVTFDSETAVKELSYYSLEDLNNKYLYIAVTVIESTGGFSEEAEIPGIKYVLSPYKLNLVATPLFLKPGIPYPIKVQVKDSLDQLVGGVPVTLNAQTIDVNQETSDLDPSKSVTRVDDGVASFVLNLPSGVTVLEFNVKTDAPDLPEENQAREGYRAIAYSSLSQSYLYIDWTDNHKALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDASYQSINIPVTQNMVPSSRLLVYYIVTGEQTAELVSDSVWLNIEEKCGNQLQVHLSPDADAYSPGQTVSLNMATGMDSWVALAAVDSAVYGVQRGAKKPLERVFQFLEKSDLGCGAGGGLNNANVFHLAGLTFLTNANADDSQENDEPCKEIL-----LQKKIEEIAAKYKHSVVKKCCYDGACVNNDETCEQRAARISLGPRCIKAFTECCVVASQLRANIS-----LGRLHMKTLLPVSKPEIRSYFPESWLWEVHLVPRRKQLQFALPDSLTTWEIQGIGISNTGICVADTVKAKVFKDVFLEMNIPYSVVRGEQIQLKGTVYNYRTSGMQFCVKMSAVEGICTSESP----------KCVRQKVEGSSSHLVTFTVLPLEIGLHNINFSLETWFGKEILVKTLRVVPEGVKRESYSGVTLDPRGIYGTISRRKEFPYRIPLDLVPKTEIKRILSVKGLLVGEILSAVLSQEGINILTHLPKGSAEAELMSVVPVFYVFHYLETGNHWNIFHSDPLIEKQKLKKKLKEGMLSIMSYRNADYSYSVWKGGSASTWLTAFALRVLGQVNKYVEQNQNSICNSLLWLVENYQLDNGSFKENSQYQPIKLQGTLPVEARENSLYLTAFTVIGIRKAFDICPLVKIDTALIKADNFLLENTLPAQSTFTLAISAYALSLGDKTHPQFRSIVSALKREALVKGNPPIYRFWKDNLQHKDSSVPNTGTARMVETTAYALLTSLNLKDINYVNPVIKWLSEEQRYGGGFYSTQDTINAIEGLTEYSLLVKQLRLSMDIDVSYKHKGALHNYKMTDKNFLGRPVEVLLNDDLIVSTGFGSGLATVHVTTVVHKTSTSEEVCSFYLKIDTQDI------------YKRIVACASYKPSREESSSGSSHAVMDISLPTGISANEEDLKALVEGVDQLFTDYQIKDGHVILQLNSIPSSDFLCVRFRIFELFEVGFLSPATFTVYEYHRPDKQCTMFYSTSNIKIQKVCEGAACKCVEADC 1532
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669   |   679       689       699       709       719       729       739   |   749       759       769       779       789       799       809       819       829       839       849       859       869 |       -  |    889       899       909       919       929       939       949       959       969       979       989       999      1009      1019      1029      1039      1049      1059      1069      1079      1089      1099      1109      1119      1129      1139      1149      1159      1169      1179      1189      1199      1209      1219      1229      1239      1249      1259      1269      1279      1289      1299      1309      1319      1329      1339      1349      1359      1369      1379      |  -      1399      1409      1419      1429      1439      1449      1459      1469      1479      1489      1499      1509      1519      1529   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       673   679                                                             743   749                                                                                                                       871        882                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    1386         1399

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "CATH Domain" information available for 3CU7)

(no "Pfam Domain" information available for 3CU7)

Asymmetric Unit(hide GO term definitions)

Chain A,B (CO5_HUMAN | P01031)

molecular function
	GO:0008009	chemokine activity	The function of a family of small chemotactic cytokines; their name is derived from their ability to induce directed chemotaxis in nearby responsive cells. All chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation. Some chemokines are considered pro-inflammatory and can be induced during an immune response to recruit cells of the immune system to a site of infection, while others are considered homeostatic and are involved in controlling the migration of cells during normal processes of tissue maintenance or development. Chemokines are found in all vertebrates, some viruses and some bacteria.
	GO:0004866	endopeptidase inhibitor activity	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0005102	receptor binding	Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
biological process
	GO:0007186	G-protein coupled receptor signaling pathway	A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription. The pathway can start from the plasma membrane, Golgi or nuclear membrane (PMID:24568158 and PMID:16902576).
	GO:0000187	activation of MAPK activity	The initiation of the activity of the inactive enzyme MAP kinase (MAPK).
	GO:0060326	cell chemotaxis	The directed movement of a motile cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).
	GO:0007166	cell surface receptor signaling pathway	A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription.
	GO:0006935	chemotaxis	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).
	GO:0006956	complement activation	Any process involved in the activation of any of the steps of the complement cascade, which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes; the initial steps of complement activation involve one of three pathways, the classical pathway, the alternative pathway, and the lectin pathway, all of which lead to the terminal complement pathway.
	GO:0006957	complement activation, alternative pathway	Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes.
	GO:0006958	complement activation, classical pathway	Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes.
	GO:0019835	cytolysis	The rupture of cell membranes and the loss of cytoplasm.
	GO:0002376	immune system process	Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats.
	GO:0001701	in utero embryonic development	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth. An example of this process is found in Mus musculus.
	GO:0006954	inflammatory response	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages.
	GO:0045087	innate immune response	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.
	GO:0010951	negative regulation of endopeptidase activity	Any process that decreases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.
	GO:0010760	negative regulation of macrophage chemotaxis	Any process that decreases the rate, frequency or extent of macrophage chemotaxis. Macrophage chemotaxis is the movement of a macrophage in response to an external stimulus.
	GO:0045766	positive regulation of angiogenesis	Any process that activates or increases angiogenesis.
	GO:0090197	positive regulation of chemokine secretion	Any process that increases the rate, frequency or extent of chemokine secretion, the regulated release of chemokines from a cell.
	GO:0098779	positive regulation of macromitophagy in response to mitochondrial depolarization	The macromitophagy process that is triggered by a detection of the loss of mitochondrial membrane potential.
	GO:0010575	positive regulation of vascular endothelial growth factor production	Any process that increases or activates the frequency, rate, or extent of production of vascular endothelial growth factor.
	GO:0030449	regulation of complement activation	Any process that modulates the frequency, rate or extent of complement activation.
	GO:0006950	response to stress	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).
cellular component
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
	GO:0005615	extracellular space	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
	GO:0005579	membrane attack complex	A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow.

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	3cu7
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(no "Related Entries Specified in the PDB File" available for 3CU7)

Description

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Ligands, Modified Residues, Ions (2, 15)

Sites (11, 11)

SS Bonds (25, 25)

Cis Peptide Bonds (2, 2)

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