3B3R - JenaLib

Asymmetric Unit (6, 6)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLU A:179 , GLN A:180 , ARG A:283 , HIS A:331 , TRP A:333 , ASN A:334 , HOH A:536	BINDING SITE FOR RESIDUE SO4 A 514
2	AC2	SOFTWARE	ARG A:254 , THR A:256 , LYS A:257 , ASP A:258 , HOH A:1010	BINDING SITE FOR RESIDUE SO4 A 515
3	AC3	SOFTWARE	ILE A:16 , GLY A:17 , GLY A:19 , TYR A:20 , GLY A:21 , LEU A:39 , GLU A:40 , MET A:41 , TYR A:107 , GLY A:109 , ARG A:110 , GLY A:111 , GLY A:114 , GLY A:115 , VAL A:118 , ASN A:119 , GLY A:120 , GLY A:121 , MET A:122 , ILE A:218 , HIS A:248 , GLN A:249 , VAL A:250 , GLY A:288 , ALA A:289 , GLY A:290 , TYR A:446 , ASP A:474 , GLY A:475 , ASN A:485 , PRO A:486 , PHE A:487 , GOL A:512 , HOH A:516 , HOH A:517 , HOH A:606 , HOH A:667 , HOH A:675 , HOH A:680 , HOH A:686 , HOH A:690 , HOH A:691 , HOH A:907 , HOH A:1135	BINDING SITE FOR RESIDUE FAE A 510
4	AC4	SOFTWARE	ALA A:363 , PRO A:364 , PRO A:366 , GOL A:512 , HOH A:601 , HOH A:671 , HOH A:841 , HOH A:1058	BINDING SITE FOR RESIDUE GOL A 511
5	AC5	SOFTWARE	GLY A:120 , MET A:122 , ILE A:218 , PRO A:344 , GLN A:361 , LEU A:377 , TYR A:446 , GLN A:447 , ASN A:485 , FAE A:510 , GOL A:511 , HOH A:573 , HOH A:841 , HOH A:907	BINDING SITE FOR RESIDUE GOL A 512
6	AC6	SOFTWARE	LEU A:237 , ILE A:244 , HOH A:570 , HOH A:703 , HOH A:1013 , HOH A:1128	BINDING SITE FOR RESIDUE GOL A 513

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 1)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:503
 aligned with CHOD_STRS0 | P12676 from UniProtKB/Swiss-Prot  Length:546

    Alignment length:503
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540   
           CHOD_STRS0    41 AADNGGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLGSFLWLDVVNRNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILPRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDTEWYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHGKQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRARDTGTLPNLNSEVGAGWGPNGNIMTARANHMWNPTGAHQSSIPALGIDAWDNSDSSVFAEIAPMPAGLETWVSLYLAITKNPQRGTFVYDAATDRAKLNWTRDQNAPAVNAAKALFDRINKANGTIYRYDLFGTQLKAFADDFCYHPLGGCVLGKATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDV 543
               SCOP domains -----d3b3ra1 A:9-318,A:451-506 Cholesterol oxidase of GMC family                                                                                                                                                                                                                                                           d3b3ra2 A:319-450 Cholesterol oxidase                                                                                               d3b3ra1 A:9-318,A:451-506                                SCOP domains
               CATH domains 3b3rA01 A:4-155,A:218-322,A:385-401,A:443-505  [code=3.50.50.60, no name defined]                                                                       3b3rA02 A:156-213,A:323-384,A:406-442                     ----3b3rA01 A:4-155,A:218-322,A:385-401,A:443-505  [code=3.50.50.60, no name defined]                        3b3rA02 A:156-213,A:323-384,A:406-442                         3b3rA01          ----3b3rA02 A:156-213,A:323-384,A:406-4423b3rA01 A:4-155,A:218-322,A:385-401,A:443-505                  - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeeee..hhhhhhhhhhhhhh...eeeee.....................hhhhh...........hhhhhhhhh.........eeeee....eeeee...hhhhhh........hhhhhhhhh...hhhhhhhhhhhhhhhhhh....hhhhhhhh..hhhhhhhhhhhhhh...eee.....hhhhhhhhhh.....hhhhh...............hhhhhhhhh..eeeee.eeeeeeee.....eeeeeeee.....eeeeeeeeeeeeee.hhhhhhhhhhhhhhhh...................eeeeee................eeeee.......eeeeee.........eeeeeeee.......eeee....eeee..hhhhhhhhhhhhhhhhhhhhhhhh.ee...........ee..ee........................eee.hhhhh.......hhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------GMC_OXRED_1             -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3b3r A   4 SADNGGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLGSFLWLDVVNRNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILPRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDTEWYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHGKQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRARDTGTLPNLNSEVGAGWGPNGNIMTARANHMWNPTGAHQSSIPALGIDAWDNSDSSVFAQIAPMPAGLETWVSLYLAITKNPQRGTFVYDAATDRAKLNWTRDQNAPAVNAAKALFDRINKANGTIYRYDLFGTQLKAFADDFCYQPLGGCVLGKATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDV 506
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (2, 2)

CATH Domains (2, 2)

Pfam Domains (0, 0)

Gene Ontology (11, 11)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A (CHOD_STRS0 | P12676)

molecular function
	GO:0016995	cholesterol oxidase activity	Catalysis of the reaction: cholesterol + O2 = cholest-5-en-3-one + H2O2.
	GO:0050660	flavin adenine dinucleotide binding	Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
	GO:0016853	isomerase activity	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
	GO:0004769	steroid delta-isomerase activity	Catalysis of the reaction: a 3-oxo-delta(5)-steroid = a 3-oxo-delta(4)-steroid.
biological process
	GO:0008203	cholesterol metabolic process	The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues.
	GO:0006629	lipid metabolic process	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
	GO:0008202	steroid metabolic process	The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.
cellular component
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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	3b3r
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	CHOD_STRS0 \| P12676
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	1.1.3.6
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 6)

Sites (6, 6)