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(-) Description

Title :  SNAPSHOTS OF CATALYSIS IN THE E1 SUBUNIT OF THE PYRUVATE DEHYDROGENASE MULTI-ENZYME COMPLEX
 
Authors :  X. Y. Pei, C. M. Titman, R. A. W. Frank, F. J. Leeper, B. F. Luisi
Date :  18 Jul 08  (Deposition) - 13 Jan 09  (Release) - 13 Jan 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J
Biol. Unit 1:  A,B,C,D,I  (1x)
Biol. Unit 2:  E,F,G,H,J  (1x)
Keywords :  Oxidoreductase, Pyruvate, Dehydrogenase, Dihydrolipoyl, Acetyl Transferase, Multienzyme Complex, Transferase, Glycolysis, Phosphoprotein, Thiamine Pyrophosphate, Acyltransferase, Oxidoreductase/Transferase Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  X. Y. Pei, C. M. Titman, R. A. Frank, F. J. Leeper, B. F. Luisi
Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate Dehydrogenase Multienzyme Complex
Structure V. 16 1860 2008
PubMed-ID: 19081062  |  Reference-DOI: 10.1016/J.STR.2008.10.009
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA
    Chains: A, C, E, G
    EC Number: 1.2.4.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PKBSTE1A
    Expression System Strain: TG1 RECO
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: PDHA
    Organism Scientific: BACILLUS STEAROTHERMOPHILUS
 
Molecule 2 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA
    Chains: B, D, F, H
    EC Number: 1.2.4.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PKBSTE1B
    Expression System Strain: TG1 RECO
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: PDHB
    Organism Scientific: BACILLUS STEAROTHERMOPHILUS
 
Molecule 3 - DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX
    Chains: I, J
    EC Number: 2.3.1.12
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PKBSTE1A
    Expression System Strain: TG1 RECO
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: PDHC
    Organism Scientific: BACILLUS STEAROTHERMOPHILUS
    Synonym: E2, DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX

 Structural Features

(-) Chains, Units

  12345678910
Asymmetric Unit : ABCDEFGHIJ
Biological Unit 1 (1x): ABCD    I 
Biological Unit 2 (1x):     EFGH J

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 16)

Asymmetric Unit (4, 16)
No.NameCountTypeFull Name
1K4Ligand/IonPOTASSIUM ION
2MG6Ligand/IonMAGNESIUM ION
3PYR2Ligand/IonPYRUVIC ACID
4TPW4Ligand/Ion2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-METHYLTHIOPHEN-2-YL}ETHYL TRIHYDROGEN DIPHOSPHATE
Biological Unit 1 (2, 4)
No.NameCountTypeFull Name
1K-1Ligand/IonPOTASSIUM ION
2MG-1Ligand/IonMAGNESIUM ION
3PYR2Ligand/IonPYRUVIC ACID
4TPW2Ligand/Ion2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-METHYLTHIOPHEN-2-YL}ETHYL TRIHYDROGEN DIPHOSPHATE
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1K-1Ligand/IonPOTASSIUM ION
2MG-1Ligand/IonMAGNESIUM ION
3PYR-1Ligand/IonPYRUVIC ACID
4TPW2Ligand/Ion2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-METHYLTHIOPHEN-2-YL}ETHYL TRIHYDROGEN DIPHOSPHATE

(-) Sites  (16, 16)

Asymmetric Unit (16, 16)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:173 , ASN A:202 , PHE A:204 , TPW A:1370BINDING SITE FOR RESIDUE MG A1368
02AC2SOFTWARETYR A:102 , ARG A:103 , ILE A:142 , ILE A:144 , GLY A:172 , ASP A:173 , GLY A:174 , GLY A:175 , GLN A:178 , ASN A:202 , PHE A:204 , ALA A:205 , ILE A:206 , ARG A:267 , MG A:1368 , HOH A:1489 , GLU D:28 , LEU D:57 , GLU D:59 , GLN D:81 , PHE D:85 , PYR D:502BINDING SITE FOR RESIDUE TPW A1370
03AC3SOFTWAREILE B:112 , THR B:113 , ALA B:160 , ASP B:163 , ASP B:165 , HOH B:1344BINDING SITE FOR RESIDUE K B1325
04AC4SOFTWAREGLU A:183 , HOH A:1375 , HOH A:1436 , GLU B:88 , HOH B:1436 , HOH C:1421 , HOH D:1439BINDING SITE FOR RESIDUE MG B1326
05AC5SOFTWAREPHE B:82 , HIS B:128 , HOH B:1379 , PHE C:74 , ILE C:142 , TPW C:1370 , HOH C:1401BINDING SITE FOR RESIDUE PYR B 502
06AC6SOFTWAREASP C:173 , ASN C:202 , PHE C:204 , TPW C:1370BINDING SITE FOR RESIDUE MG C1368
07AC7SOFTWAREGLU B:28 , LEU B:57 , GLU B:59 , GLN B:81 , PHE B:85 , PYR B:502 , TYR C:102 , ARG C:103 , ILE C:142 , ILE C:144 , GLY C:172 , ASP C:173 , GLY C:174 , GLY C:175 , GLN C:178 , ASN C:202 , PHE C:204 , ALA C:205 , ILE C:206 , HIS C:271 , MG C:1368 , HOH C:1442BINDING SITE FOR RESIDUE TPW C1370
08AC8SOFTWAREILE D:112 , THR D:113 , ALA D:160 , ASP D:163 , ASP D:165 , HOH D:1328BINDING SITE FOR RESIDUE K D1325
09AC9SOFTWAREILE A:142 , TPW A:1370 , GLN D:81 , PHE D:82 , PHE D:85 , HIS D:128BINDING SITE FOR RESIDUE PYR D 502
10BC1SOFTWARETYR E:102 , ARG E:103 , ILE E:142 , ILE E:144 , GLY E:172 , ASP E:173 , GLY E:174 , GLY E:175 , ASN E:202 , PHE E:204 , ALA E:205 , ILE E:206 , MG E:1368 , HOH E:1462 , GLU H:28 , LEU H:57 , GLU H:59 , GLN H:81 , PHE H:85 , GLU H:88BINDING SITE FOR RESIDUE TPW E1370
11BC2SOFTWAREGLY E:172 , ASP E:173 , GLN E:200 , ASN E:202 , TPW E:1370BINDING SITE FOR RESIDUE MG E1368
12BC3SOFTWAREILE F:112 , THR F:113 , ALA F:160 , ASP F:163 , ASP F:165BINDING SITE FOR RESIDUE K F1325
13BC4SOFTWAREASP G:180 , GLU G:183 , HOH H:1372 , HOH H:1376BINDING SITE FOR RESIDUE MG G1326
14BC5SOFTWAREGLU F:28 , LEU F:57 , GLU F:59 , GLN F:81 , PHE F:85 , TYR G:102 , ARG G:103 , ILE G:142 , ILE G:144 , GLY G:172 , ASP G:173 , GLY G:174 , GLY G:175 , GLN G:178 , ASN G:202 , PHE G:204 , ALA G:205 , ILE G:206 , HIS G:271 , MG G:1367BINDING SITE FOR RESIDUE TPW G1370
15BC6SOFTWAREASP G:173 , ASN G:202 , PHE G:204 , TPW G:1370BINDING SITE FOR RESIDUE MG G1367
16BC7SOFTWAREILE H:112 , THR H:113 , ALA H:160 , ASP H:163 , ASP H:165 , HOH H:1330BINDING SITE FOR RESIDUE K H1325

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3DV0)

(-) Cis Peptide Bonds  (5, 5)

Asymmetric Unit
No.Residues
1Gln B:239 -Pro B:240
2Gly C:269 -Pro C:270
3Gln D:239 -Pro D:240
4Gln F:239 -Pro F:240
5Gln H:239 -Pro H:240

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3DV0)

(-) PROSITE Motifs  (1, 2)

Asymmetric Unit (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PSBDPS51826 Peripheral subunit-binding (PSBD) domain profile.ODP2_GEOSE130-167
 		  2I:130-167
J:130-167
Biological Unit 1 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PSBDPS51826 Peripheral subunit-binding (PSBD) domain profile.ODP2_GEOSE130-167
 		  1I:130-167
-
Biological Unit 2 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PSBDPS51826 Peripheral subunit-binding (PSBD) domain profile.ODP2_GEOSE130-167
 		  1-
J:130-167

(-) Exons   (0, 0)

(no "Exon" information available for 3DV0)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:349
 aligned with ODPA_GEOSE | P21873 from UniProtKB/Swiss-Prot  Length:369

    Alignment length:364
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364    
           ODPA_GEOSE     5 TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKES 368
               SCOP domains d3dv0a_ A: automated matches                                                                                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains 3dv0A00 A:4-367  [code=3.40.50.970, no name defined]                                                                                                                                                                                                                                                                                                                         CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhh..ee..................hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh.....eee....hhhhhhhh..hhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee..ee..ee.hhh.....hhhhhhhh...eeeee..hhhhhhhhhhhhhhhhhh....eeeeee.......---------------.......hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhh.....hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dv0 A   4 TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPH---------------ENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKES 367
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       | -         -   |   293       303       313       323       333       343       353       363    
                                                                                                                                                                                                                                                                                                     271             287                                                                                


Chain B from PDB  Type:PROTEIN  Length:324
 aligned with ODPB_GEOSE | P21874 from UniProtKB/Swiss-Prot  Length:325

    Alignment length:324
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321    
           ODPB_GEOSE     2 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 325
               SCOP domains d3dv0b1 B:1-186 automated matches                                                                                                                                                         d3dv0b2 B:187-324 automated matches                                                                                                        SCOP domains
               CATH domains 3dv0B01 B:1-191  [code=3.40.50.970, no name defined]                                                                                                                                           3dv0B02 B:192-324  [code=3.40.50.920, no name defined]                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeehhhhhhhhhhhhhhhh..eeeee..............hhhhhhh...eee...hhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhhhhhhhhhh........eeeeee.............hhhhhh.....eee...hhhhhhhhhhhhhhh...eeeeee.hhh...eee.............eeee....eeeee.hhhhhhhhhhhhhhhhh...eeeee..eee..hhhhhhhhhhhhh.eeeeeeee....hhhhhhhhhhhhhhhhh....eeeee......hhhhhhhhh.hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3dv0 B   1 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 324
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320    


Chain C from PDB  Type:PROTEIN  Length:351
 aligned with ODPA_GEOSE | P21873 from UniProtKB/Swiss-Prot  Length:369

    Alignment length:365
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364     
           ODPA_GEOSE     5 TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 369
               SCOP domains d3dv0c_ C: automated matches                                                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains 3dv0C00 C:4-368  [code=3.40.50.970, no name defined]                                                                                                                                                                                                                                                                                                                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhh..ee..........hhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhh......eee....hhhhhhhh..hhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee..ee..eehhhhh....hhhhhhhh...eeeee..hhhhhhhhhhhhhhhhhh....eeeeee........--------------..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhh.....hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dv0 C   4 TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHT--------------ENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 368
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263        |-         -   |   293       303       313       323       333       343       353       363     
                                                                                                                                                                                                                                                                                                      272            287                                                                                 


Chain D from PDB  Type:PROTEIN  Length:324
 aligned with ODPB_GEOSE | P21874 from UniProtKB/Swiss-Prot  Length:325

    Alignment length:324
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321    
           ODPB_GEOSE     2 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 325
               SCOP domains d3dv0d1 D:1-186 automated matches                                                                                                                                                         d3dv0d2 D:187-324 automated matches                                                                                                        SCOP domains
               CATH domains 3dv0D01 D:1-191  [code=3.40.50.970, no name defined]                                                                                                                                           3dv0D02 D:192-324  [code=3.40.50.920, no name defined]                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eehhhhhhhhhhhhhhhhh..eeeee..............hhhhhhh...eee...hhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhhhhhhhhhh........eeeeee.............hhhhhh.....eee...hhhhhhhhhhhhhhh...eeeeee.hhh....ee.............eeee....eeeee..hhhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhh.eeeeeeee....hhhhhhhhhhhhhhhhh....eeeee......hhhhhhhhh.hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3dv0 D   1 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 324
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320    


Chain E from PDB  Type:PROTEIN  Length:344
 aligned with ODPA_GEOSE | P21873 from UniProtKB/Swiss-Prot  Length:369

    Alignment length:364
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364    
           ODPA_GEOSE     5 TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKES 368
               SCOP domains d3dv0e_ E: automated matches                                                                                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains 3dv0E00 E:4-367  [code=3.40.50.970, no name defined]                                                                                                                                                                                                                                                                                                                         CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhh..ee..........hhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh.....eee....hhhhhhh...hhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee..ee..ee.hhh.....hhhhhhh....eeeee..hhhhhhhhhhhhhhhhhh....eeeeee....--------------------.....hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhh.....hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dv0 E   4 TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRY--------------------EWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKES 367
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263    |    -         -     | 293       303       313       323       333       343       353       363    
                                                                                                                                                                                                                                                                                                  268                  289                                                                              


Chain F from PDB  Type:PROTEIN  Length:324
 aligned with ODPB_GEOSE | P21874 from UniProtKB/Swiss-Prot  Length:325

    Alignment length:324
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321    
           ODPB_GEOSE     2 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 325
               SCOP domains d3dv0f1 F:1-186 automated matches                                                                                                                                                         d3dv0f2 F:187-324 automated matches                                                                                                        SCOP domains
               CATH domains 3dv0F01 F:1-191  [code=3.40.50.970, no name defined]                                                                                                                                           3dv0F02 F:192-324  [code=3.40.50.920, no name defined]                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eehhhhhhhhhhhhhhhhh..eeeee..............hhhhhhh...eee...hhhhhhhhhhhhhh...eeee...hhhhhhhhhhhhhh...hhhhhh........eeeeee.............hhhhhh......ee...hhhhhhhhhhhhhhh...eeeeee.hhh....ee.............eeee....eeeee.hhhhhhhhhhhhhhhh....eeeee..eee..hhhhhhhhhhhhh.eeeeeeee....hhhhhhhhhhhhhhhhh....eeeee......hhhhhhhhh.hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3dv0 F   1 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 324
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320    


Chain G from PDB  Type:PROTEIN  Length:352
 aligned with ODPA_GEOSE | P21873 from UniProtKB/Swiss-Prot  Length:369

    Alignment length:364
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364    
           ODPA_GEOSE     5 TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKES 368
               SCOP domains d3dv0g_ G: automated matches                                                                                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains 3dv0G00 G:4-367  [code=3.40.50.970, no name defined]                                                                                                                                                                                                                                                                                                                         CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhh...............hhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh.....eee....hhhhhhh...hhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee..ee..eehhhhh....hhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhh....eeeeee........----...--------......hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhh.....hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dv0 G   4 TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHT----DPT--------NEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKES 367
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263        |-   | |   -    |  293       303       313       323       333       343       353       363    
                                                                                                                                                                                                                                                                                                      272  277 |      288                                                                               
                                                                                                                                                                                                                                                                                                             279                                                                                        


Chain H from PDB  Type:PROTEIN  Length:324
 aligned with ODPB_GEOSE | P21874 from UniProtKB/Swiss-Prot  Length:325

    Alignment length:324
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321    
           ODPB_GEOSE     2 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 325
               SCOP domains d3dv0h1 H:1-186 automated matches                                                                                                                                                         d3dv0h2 H:187-324 automated matches                                                                                                        SCOP domains
               CATH domains 3dv0H01 H:1-191  [code=3.40.50.970, no name defined]                                                                                                                                           3dv0H02 H:192-324  [code=3.40.50.920, no name defined]                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eehhhhhhhhhhhhhhhhh..eeeee..............hhhhhhh...eee...hhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhhhhhhhhhh........eeeeee.............hhhhhhh....eee...hhhhhhhhhhhhhhh...eeeeee.hhh....ee.............eeee....eeeee..hhhhhhhhhhhhhhh....eeeee..eee..hhhhhhhhhhhhh.eeeeeeee....hhhhhhhhhhhhhhhhh....eeeee......hhhhh.....hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3dv0 H   1 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 324
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320    


Chain I from PDB  Type:PROTEIN  Length:43
 aligned with ODP2_GEOSE | P11961 from UniProtKB/Swiss-Prot  Length:428

    Alignment length:43
                                   136       146       156       166   
           ODP2_GEOSE   127 RRVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLAG 169
               SCOP domains d3dv0i_ I: automated matches                SCOP domains
               CATH domains 3dv0I00 I:127-169                           CATH domains
               Pfam domains ------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhh..hhhhh...hhhhh.....hhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------- SAPs(SNPs)
                    PROSITE ---PSBD  PDB: I:130-167 UniProt: 130-167 -- PROSITE
                 Transcript ------------------------------------------- Transcript
                 3dv0 I 127 RRVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLAG 169
                                   136       146       156       166   


Chain J from PDB  Type:PROTEIN  Length:41
 aligned with ODP2_GEOSE | P11961 from UniProtKB/Swiss-Prot  Length:428

    Alignment length:41
                                   138       148       158       168 
           ODP2_GEOSE   129 VIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLAG 169
               SCOP domains d3dv0j_ J: automated matches              SCOP domains
               CATH domains ----------------------------------------- CATH domains
               Pfam domains ----------------------------------------- Pfam domains
         Sec.struct. author ......................................... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------- SAPs(SNPs)
                    PROSITE -PSBD  PDB: J:130-167 UniProt: 130-167 -- PROSITE
                 Transcript ----------------------------------------- Transcript
                 3dv0 J 129 VIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLAG 169
                                   138       148       158       168
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (4, 14)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (3, 13)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Few Secondary Structures (1120)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3DV0)

(-) Gene Ontology  (10, 17)

Asymmetric Unit(hide GO term definitions)
Chain A,C,E,G   (ODPA_GEOSE | P21873)
molecular function
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016624    oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide.
    GO:0004739    pyruvate dehydrogenase (acetyl-transferring) activity    Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2.
biological process
    GO:0006096    glycolytic process    The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Chain B,D,F,H   (ODPB_GEOSE | P21874)
molecular function
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0004739    pyruvate dehydrogenase (acetyl-transferring) activity    Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2.
biological process
    GO:0006096    glycolytic process    The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Chain I,J   (ODP2_GEOSE | P11961)
molecular function
    GO:0004742    dihydrolipoyllysine-residue acetyltransferase activity    Catalysis of the reaction: acetyl-CoA + dihydrolipoamide = CoA + S-acetyldihydrolipoamide.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0016746    transferase activity, transferring acyl groups    Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
biological process
    GO:0006096    glycolytic process    The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

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  ODPA_GEOSE | P21873
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  ODPB_GEOSE | P21874
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ODP2_GEOSE | P11961: 1b5s 1ebd 1lab 1lac 1w3d 1w4e 1w4f 1w4g 1w4h 1w85 1w88 2pdd 2pde 3duf 3dva
        ODPA_GEOSE | P21873: 1w85 1w88 3duf 3dva
        ODPB_GEOSE | P21874: 1w85 1w88 3duf 3dva

(-) Related Entries Specified in the PDB File

3duf 3dva