1W85 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   THE CRYSTAL STRUCTURE OF PYRUVATE DEHYDROGENASE E1 BOUND TO THE PERIPHERAL SUBUNIT BINDING DOMAIN OF E2

Authors :   R. A. W. Frank, J. V. Pratap, X. Y. Pei, R. N. Perham, B. F. Luisi

Date :   16 Sep 04 (Deposition) - 02 Nov 04 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.00

Chains :   Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A,B,C,D,I  (1x)
Biol. Unit 2: E,F,G,H,J  (1x)

Keywords :   Pyruvate, Dehydrogenase, Dihydrolipoyl, Acetyl Transferase, Multienzyme Complex, Oxidoreductase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   R. A. W. Frank, C. M. Titman, J. V. Pratap, B. F. Luisi, R. N. Perham
A Molecular Switch And Proton Wire Synchronize The Active Sites In Thiamine Enzymes
Science V. 306 872 2004
PubMed-ID: 15514159 | Reference-DOI: 10.1126/SCIENCE.1101030
(for further references see the PDB file header)

Molecule 1 - PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT
	Chains	:	A, C, E, G
	EC Number	:	1.2.4.1
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Organism Scientific	:	GEOBACILLUS STEAROTHERMOPHILUS
	Organism Taxid	:	1422

Molecule 2 - PYRUVATE DEHYDROGENASE E1 COMPONENT, BETA SUBUNIT
	Chains	:	B, D, F, H
	EC Number	:	1.2.4.1
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Organism Scientific	:	GEOBACILLUS STEAROTHERMOPHILUS
	Organism Taxid	:	1422

Molecule 3 - DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT OF PYRUVATE
	Chains	:	I, J
	EC Number	:	2.3.1.12
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Fragment	:	PERIPHERAL SUBUNIT BINDING DOMAIN (PSBD), RESIDUES 122-170
	Organism Scientific	:	GEOBACILLUS STEAROTHERMOPHILUS
	Organism Taxid	:	1422
	Synonym	:	E2, DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX

		1	2	3	4	5	6	7	8	9	10
Asymmetric Unit	:	A	B	C	D	E	F	G	H	I	J
Biological Unit 1 (1x)	:	A	B	C	D					I
Biological Unit 2 (1x)	:					E	F	G	H		J

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (4, 17)

No.	Name	Count	Type	Full Name
1	K	4	Ligand/Ion	POTASSIUM ION
2	MG	6	Ligand/Ion	MAGNESIUM ION
3	PEG	3	Ligand/Ion	DI(HYDROXYETHYL)ETHER
4	TDP	4	Ligand/Ion	THIAMIN DIPHOSPHATE

Biological Unit 1 (2, 4)

No.	Name	Count	Type	Full Name
1	K	-1	Ligand/Ion	POTASSIUM ION
2	MG	-1	Ligand/Ion	MAGNESIUM ION
3	PEG	2	Ligand/Ion	DI(HYDROXYETHYL)ETHER
4	TDP	2	Ligand/Ion	THIAMIN DIPHOSPHATE

Biological Unit 2 (2, 3)

No.	Name	Count	Type	Full Name
1	K	-1	Ligand/Ion	POTASSIUM ION
2	MG	-1	Ligand/Ion	MAGNESIUM ION
3	PEG	1	Ligand/Ion	DI(HYDROXYETHYL)ETHER
4	TDP	2	Ligand/Ion	THIAMIN DIPHOSPHATE

Asymmetric Unit (17, 17)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASP A:173 , ASN A:202 , PHE A:204 , TDP A:1370	BINDING SITE FOR RESIDUE MG A1368
02	AC2	SOFTWARE	ILE B:112 , THR B:113 , ALA B:160 , ASP B:163 , ASP B:165 , HOH B:2069	BINDING SITE FOR RESIDUE K B1325
03	AC3	SOFTWARE	HOH A:2131 , HOH B:2045 , HOH B:2046 , HOH C:2169 , HOH C:2170 , HOH D:2071	BINDING SITE FOR RESIDUE MG B1326
04	AC4	SOFTWARE	ASP C:173 , ASN C:202 , PHE C:204 , TDP C:1370 , HOH C:2173	BINDING SITE FOR RESIDUE MG C1368
05	AC5	SOFTWARE	ILE D:112 , THR D:113 , ALA D:160 , ASP D:163 , ASP D:165 , HOH D:2087	BINDING SITE FOR RESIDUE K D1325
06	AC6	SOFTWARE	ASP E:173 , ASN E:202 , TDP E:1370 , HOH E:2079 , HOH E:2087	BINDING SITE FOR RESIDUE MG E1368
07	AC7	SOFTWARE	ILE F:112 , THR F:113 , ALA F:160 , ASP F:163 , ASP F:165 , HOH F:2060	BINDING SITE FOR RESIDUE K F1325
08	AC8	SOFTWARE	HOH E:2083 , HOH E:2084 , HOH F:2045 , HOH G:2125 , HOH G:2127 , HOH H:2057	BINDING SITE FOR RESIDUE MG F1326
09	AC9	SOFTWARE	ASP G:173 , ASN G:202 , PHE G:204 , TDP G:1370 , HOH G:2131	BINDING SITE FOR RESIDUE MG G1368
10	BC1	SOFTWARE	ILE H:112 , THR H:113 , ALA H:160 , ASP H:163 , ASP H:165 , HOH H:2072	BINDING SITE FOR RESIDUE K H1325
11	BC2	SOFTWARE	TYR A:102 , ARG A:103 , ILE A:142 , ILE A:143 , ILE A:144 , GLY A:172 , ASP A:173 , GLY A:174 , GLY A:175 , GLN A:178 , ASN A:202 , PHE A:204 , ALA A:205 , ILE A:206 , HIS A:271 , MG A:1368 , HOH A:2163 , HOH A:2222 , HOH A:2223 , HOH A:2224 , GLU D:28 , LEU D:57 , GLU D:59 , GLN D:81 , PHE D:85	BINDING SITE FOR RESIDUE TDP A1370
12	BC3	SOFTWARE	GLU B:28 , LEU B:57 , GLU B:59 , GLN B:81 , PHE B:85 , TYR C:102 , ARG C:103 , ILE C:142 , ILE C:143 , ILE C:144 , GLY C:172 , ASP C:173 , GLY C:174 , GLY C:175 , GLN C:178 , ASN C:202 , PHE C:204 , ALA C:205 , ILE C:206 , HIS C:271 , MG C:1368 , HOH C:2173 , HOH C:2279 , HOH C:2280 , HOH C:2281 , HOH C:2282	BINDING SITE FOR RESIDUE TDP C1370
13	BC4	SOFTWARE	TYR E:102 , ARG E:103 , ILE E:142 , ILE E:144 , GLY E:172 , ASP E:173 , GLY E:174 , GLY E:175 , GLN E:178 , ASN E:202 , HIS E:271 , MG E:1368 , HOH E:2087 , HOH E:2136 , HOH E:2137 , GLU H:28 , LEU H:57 , GLU H:59 , GLN H:81 , PHE H:85	BINDING SITE FOR RESIDUE TDP E1370
14	BC5	SOFTWARE	GLU F:28 , LEU F:57 , GLU F:59 , GLN F:81 , PHE F:85 , TYR G:102 , ARG G:103 , ILE G:142 , ILE G:144 , GLY G:172 , ASP G:173 , GLY G:174 , GLY G:175 , GLN G:178 , ASN G:202 , PHE G:204 , ALA G:205 , ILE G:206 , HIS G:271 , MG G:1368 , HOH G:2131 , HOH G:2231 , HOH G:2232 , HOH G:2233 , HOH G:2234	BINDING SITE FOR RESIDUE TDP G1370
15	BC6	SOFTWARE	MET A:160 , PHE A:191 , GLU B:49	BINDING SITE FOR RESIDUE PEG A1369
16	BC7	SOFTWARE	MET C:160 , PHE C:191 , HOH C:2152 , GLU D:49	BINDING SITE FOR RESIDUE PEG C1369
17	BC8	SOFTWARE	ILE G:109 , TRP G:110 , GLU G:324	BINDING SITE FOR RESIDUE PEG G1369

(no "SS Bond" information available for 1W85)

Asymmetric Unit

No.	Residues
1	Gln B:239	-	Pro B:240
2	Gln D:239	-	Pro D:240
3	Gln F:239	-	Pro F:240
4	Gln H:239	-	Pro H:240

(no "SAP(SNP)/Variant" information available for 1W85)

Asymmetric Unit (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PSBD	PS51826	Peripheral subunit-binding (PSBD) domain profile.	ODP2_GEOSE	130-167	2	I:130-167 J:130-167

Biological Unit 1 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PSBD	PS51826	Peripheral subunit-binding (PSBD) domain profile.	ODP2_GEOSE	130-167	1	I:130-167 -

Biological Unit 2 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PSBD	PS51826	Peripheral subunit-binding (PSBD) domain profile.	ODP2_GEOSE	130-167	1	- J:130-167

(no "Exon" information available for 1W85)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:359
 aligned with ODPA_GEOSE | P21873 from UniProtKB/Swiss-Prot  Length:369

    Alignment length:365
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364     
           ODPA_GEOSE     5 TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 369
               SCOP domains d1w85a_ A: Pyruvate dehydrogenase E1-alpha, PdhA                                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 1w85A00 A:4-368  [code=3.40.50.970, no name defined]                                                                                                                                                                                                                                                                                                                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhh..ee..........hhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh.....eee....hhhhhhhh..hhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee..ee..ee.hhh.....hhhhhhhh...eeeee..hhhhhhhhhhhhhhhhhh....eeeeee............------hhhhhhhhhh.hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhh.....hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1w85 A   4 TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGD------SKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 368
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273  |    283       293       303       313       323       333       343       353       363     
                                                                                                                                                                                                                                                                                                          276    283

Chain B from PDB  Type:PROTEIN  Length:324
 aligned with ODPB_GEOSE | P21874 from UniProtKB/Swiss-Prot  Length:325

    Alignment length:324
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321    
           ODPB_GEOSE     2 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 325
               SCOP domains d1w85b1 B:1-192 Pyruvate dehydrogenase E1-beta, PdhB, N-terminal domain                                                                                                                         d1w85b2 B:193-324 Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain                                                            SCOP domains
               CATH domains 1w85B01 B:1-191  [code=3.40.50.970, no name defined]                                                                                                                                           1w85B02 B:192-324  [code=3.40.50.920, no name defined]                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eehhhhhhhhhhhhhhhhh..eeeee..............hhhhhhh...eee...hhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhhhhhhhhhh........eeeeee.............hhhhhh.....eee...hhhhhhhhhhhhhhh...eeeeee........ee.............eeee....eeeee..hhhhhhhhhhhhhhhh...eeeee..eee..hhhhhhhhhhhhh.eeeeeeee....hhhhhhhhhhhhhhhhh....eeeee......hhhhhhhhh.hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1w85 B   1 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 324
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320

Chain C from PDB  Type:PROTEIN  Length:365
 aligned with ODPA_GEOSE | P21873 from UniProtKB/Swiss-Prot  Length:369

    Alignment length:365
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364     
           ODPA_GEOSE     5 TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 369
               SCOP domains d1w85c_ C: Pyruvate dehydrogenase E1-alpha, PdhA                                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 1w85C00 C:4-368  [code=3.40.50.970, no name defined]                                                                                                                                                                                                                                                                                                                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhh...ee..........hhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh.....eee....hhhhhhhhh.hhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee..ee..ee.hhh.....hhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhh....eeeeee............hhhhh.hhhhhhhhhh.hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhh.....hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1w85 C   4 TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 368
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363

Chain D from PDB  Type:PROTEIN  Length:324
 aligned with ODPB_GEOSE | P21874 from UniProtKB/Swiss-Prot  Length:325

    Alignment length:324
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321    
           ODPB_GEOSE     2 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 325
               SCOP domains d1w85d1 D:1-192 Pyruvate dehydrogenase E1-beta, PdhB, N-terminal domain                                                                                                                         d1w85d2 D:193-324 Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain                                                            SCOP domains
               CATH domains 1w85D01 D:1-191  [code=3.40.50.970, no name defined]                                                                                                                                           1w85D02 D:192-324  [code=3.40.50.920, no name defined]                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eehhhhhhhhhhhhhhhhh..eeeee..............hhhhhhh...eee...hhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhhhhhhhhhh........eeeeee.............hhhhhh.....eee...hhhhhhhhhhhhhhh...eeeeee.hhh....ee.............eeee....eeeee..hhhhhhhhhhhhhhhh...eeeee..eee..hhhhhhhhhhhhh.eeeeeeee....hhhhhhhhhhhhhhhhh....eeeee......hhhhhhhhh.hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1w85 D   1 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 324
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320

Chain E from PDB  Type:PROTEIN  Length:350
 aligned with ODPA_GEOSE | P21873 from UniProtKB/Swiss-Prot  Length:369

    Alignment length:364
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365    
           ODPA_GEOSE     6 FQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 369
               SCOP domains d1w85e_ E: Pyruvate dehydrogenase E1-alpha, PdhA                                                                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains 1w85E00 E:5-368  [code=3.40.50.970, no name defined]                                                                                                                                                                                                                                                                                                                         CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhh..ee..........hhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh.....eee....hhhhhhhh..hhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee..--------.......hhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhh....eeeeee.............------hhhhhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhh.....hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1w85 E   5 FQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNR--------KQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDD------KELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 368
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194        |-       214       224       234       244       254       264       274  |    284       294       304       314       324       334       344       354       364    
                                                                                                                                                                                                                                203      212                                                              277    284

Chain F from PDB  Type:PROTEIN  Length:324
 aligned with ODPB_GEOSE | P21874 from UniProtKB/Swiss-Prot  Length:325

    Alignment length:324
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321    
           ODPB_GEOSE     2 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 325
               SCOP domains d1w85f1 F:1-192 Pyruvate dehydrogenase E1-beta, PdhB, N-terminal domain                                                                                                                         d1w85f2 F:193-324 Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain                                                            SCOP domains
               CATH domains 1w85F01 F:1-191  [code=3.40.50.970, no name defined]                                                                                                                                           1w85F02 F:192-324  [code=3.40.50.920, no name defined]                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eehhhhhhhhhhhhhhhhh..eeeee..............hhhhhhh...eee...hhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhhhhhhhhhh........eeeeee.............hhhhhh.....eee...hhhhhhhhhhhhhhh...eeeeee.hhh....ee.............eeee....eeeee..hhhhhhhhhhhhhhh....eeeee..eee..hhhhhhhhhhhhh.eeeeeeee....hhhhhhhhhhhhhhhhh....eeeee......hhhhhhhhh.hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1w85 F   1 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 324
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320

Chain G from PDB  Type:PROTEIN  Length:364
 aligned with ODPA_GEOSE | P21873 from UniProtKB/Swiss-Prot  Length:369

    Alignment length:364
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365    
           ODPA_GEOSE     6 FQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 369
               SCOP domains d1w85g_ G: Pyruvate dehydrogenase E1-alpha, PdhA                                                                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains 1w85G00 G:5-368  [code=3.40.50.970, no name defined]                                                                                                                                                                                                                                                                                                                         CATH domains
           Pfam domains (1) ---------------------------------------------E1_dh-1w85G01 G:50-341                                                                                                                                                                                                                                                                              --------------------------- Pfam domains (1)
           Pfam domains (2) ---------------------------------------------E1_dh-1w85G02 G:50-341                                                                                                                                                                                                                                                                              --------------------------- Pfam domains (2)
           Pfam domains (3) ---------------------------------------------E1_dh-1w85G03 G:50-341                                                                                                                                                                                                                                                                              --------------------------- Pfam domains (3)
           Pfam domains (4) ---------------------------------------------E1_dh-1w85G04 G:50-341                                                                                                                                                                                                                                                                              --------------------------- Pfam domains (4)
         Sec.struct. author ...hhhhhhhhhhh...............hhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh.....eee....hhhhhhhh..hhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee..ee..ee.hhh.....hhhhhhhh...eeeee..hhhhhhhhhhhhhhhhhh....eeeeee............hhhhh.hhhhhhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhh.....hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1w85 G   5 FQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 368
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364

Chain H from PDB  Type:PROTEIN  Length:324
 aligned with ODPB_GEOSE | P21874 from UniProtKB/Swiss-Prot  Length:325

    Alignment length:324
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321    
           ODPB_GEOSE     2 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 325
               SCOP domains d1w85h1 H:1-192 Pyruvate dehydrogenase E1-beta, PdhB, N-terminal domain                                                                                                                         d1w85h2 H:193-324 Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain                                                            SCOP domains
               CATH domains 1w85H01 H:1-191  [code=3.40.50.970, no name defined]                                                                                                                                           1w85H02 H:192-324  [code=3.40.50.920, no name defined]                                                                                CATH domains
           Pfam domains (1) Transket_pyr-1w85H01 H:1-179                                                                                                                                                       -------------Transketolase_C-1w85H05 H:193-315                                                                                          --------- Pfam domains (1)
           Pfam domains (2) Transket_pyr-1w85H02 H:1-179                                                                                                                                                       -------------Transketolase_C-1w85H06 H:193-315                                                                                          --------- Pfam domains (2)
           Pfam domains (3) Transket_pyr-1w85H03 H:1-179                                                                                                                                                       -------------Transketolase_C-1w85H07 H:193-315                                                                                          --------- Pfam domains (3)
           Pfam domains (4) Transket_pyr-1w85H04 H:1-179                                                                                                                                                       -------------Transketolase_C-1w85H08 H:193-315                                                                                          --------- Pfam domains (4)
         Sec.struct. author .eehhhhhhhhhhhhhhhhh..eeeee..............hhhhhhh...eee...hhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhhhhhhhhhh........eeeeee.............hhhhhh.....eee...hhhhhhhhhhhhhhh...eeeeee........ee.............eeee....eeeee..hhhhhhhhhhhhhhh....eeeee..eee..hhhhhhhhhhhhh.eeeeeeee....hhhhhhhhhhhhhhhhh....eeeee......hhhhhhhhh.hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1w85 H   1 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 324
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320

Chain I from PDB  Type:PROTEIN  Length:42
 aligned with ODP2_GEOSE | P11961 from UniProtKB/Swiss-Prot  Length:428

    Alignment length:42
                                   137       147       157       167  
           ODP2_GEOSE   128 RVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLAG 169
               SCOP domains d1w85i_ I:                                 SCOP domains
               CATH domains 1w85I00 I:128-169                          CATH domains
               Pfam domains ------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhhhhhhh..........hhhhh.hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------ SAPs(SNPs)
                    PROSITE --PSBD  PDB: I:130-167 UniProt: 130-167 -- PROSITE
                 Transcript ------------------------------------------ Transcript
                 1w85 I 128 RVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLAG 169
                                   137       147       157       167

Chain J from PDB  Type:PROTEIN  Length:35
 aligned with ODP2_GEOSE | P11961 from UniProtKB/Swiss-Prot  Length:428

    Alignment length:39
                                   138       148       158         
           ODP2_GEOSE   129 VIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFL 167
               SCOP domains d1w85j_ J:                              SCOP domains
               CATH domains --------------------------------------- CATH domains
           Pfam domains (1) E3_binding-1w85J01     J:129-165     -- Pfam domains (1)
           Pfam domains (2) E3_binding-1w85J02     J:129-165     -- Pfam domains (2)
         Sec.struct. author ...hhhhhhhhhhh....----..hhhhh...hhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------- SAPs(SNPs)
                    PROSITE -PSBD  PDB: J:130-167 UniProt: 130-167  PROSITE
                 Transcript --------------------------------------- Transcript
                 1w85 J 129 VIAMPSVRKYAREKGVDI----GTGKNGRVLKEDIDAFL 167
                                   138       | -  |    158         
                                           146  151

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: [code=3.40.50.920, no name defined] (73)

Geobacillus stearothermophilus. Organism_taxid: 1422. (2)

1a	1w85B02	B:192-324
1b	1w85D02	D:192-324
1c	1w85F02	F:192-324
1d	1w85H02	H:192-324

Homologous Superfamily: [code=3.40.50.970, no name defined] (144)

Geobacillus stearothermophilus. Organism_taxid: 1422. (2)

2a	1w85B01	B:1-191
2b	1w85D01	D:1-191
2c	1w85E00	E:5-368
2d	1w85A00	A:4-368
2e	1w85G00	G:5-368
2f	1w85C00	C:4-368
2g	1w85F01	F:1-191
2h	1w85H01	H:1-191

Class: Few Secondary Structures (1120)

Architecture: Irregular (1120)

Topology: Dihydrolipoamide Transferase (20)

Homologous Superfamily: Dihydrolipoamide Transferase (20)

Geobacillus stearothermophilus. Organism_taxid: 1422. (4)

1w85I00

I:128-169

Asymmetric Unit(hide GO term definitions)

Chain A,C,E,G (ODPA_GEOSE | P21873)

molecular function
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide.
	GO:0004739	pyruvate dehydrogenase (acetyl-transferring) activity	Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2.
biological process
	GO:0006096	glycolytic process	The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Chain B,D,F,H (ODPB_GEOSE | P21874)

molecular function
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0004739	pyruvate dehydrogenase (acetyl-transferring) activity	Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2.
biological process
	GO:0006096	glycolytic process	The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Chain I,J (ODP2_GEOSE | P11961)

molecular function
	GO:0004742	dihydrolipoyllysine-residue acetyltransferase activity	Catalysis of the reaction: acetyl-CoA + dihydrolipoamide = CoA + S-acetyldihydrolipoamide.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
	GO:0016746	transferase activity, transferring acyl groups	Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
biological process
	GO:0006096	glycolytic process	The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

Asymmetric Unit
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	Cis Peptide Bonds
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	1w85
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	ODPA_GEOSE \| P21873
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	ODPB_GEOSE \| P21874
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	1.2.4.1
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UniProtKB/Swiss-Prot
	ODP2_GEOSE \| P11961	:	1b5s 1ebd 1lab 1lac 1w3d 1w4e 1w4f 1w4g 1w4h 1w88 2pdd 2pde 3duf 3dv0 3dva
	ODPA_GEOSE \| P21873	:	1w88 3duf 3dv0 3dva
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1b5s	DIHYDROLIPOYL TRANSACETYLASE CATALYTIC DOMAIN (RESIDUES 184-425) FROM BACILLUS STEAROTHERMOPHILUS
1ebd	DIHYDROLIPOAMIDE DEHYDROGENASE COMPLEXED WITH THE BINDING DOMAIN OF THE DIHYDROLIPOAMIDE ACETYLASE
1lab	DIHYDROLIPOAMIDE ACETYLTRANSFERASE (E2P) SUBUNIT OF THE PYRUVATE DEHYDROGENASE (PDH) MULTIENZYME COMPLEX (LIPOYLATED DOMAIN, RESIDUES 1 - 80) (NMR, 11 STRUCTURES)
1lac	DIHYDROLIPOAMIDE ACETYLTRANSFERASE (E2P) SUBUNIT OF THE PYRUVATE DEHYDROGENASE (PDH) MULTIENZYME COMPLEX (LIPOYLATED DOMAIN, RESIDUES 1 - 80) (NMR, AVERAGE STRUCTURE)
1w3d	NMR STRUCTURE OF THE PERIPHERAL-SUBUNIT BINDING DOMAIN OF BACILLUS STEAROTHERMOPHILUS E2P
1w4e	PERIPHERAL-SUBUNIT BINDING DOMAINS FROM MESOPHILIC, THERMOPHILIC, AND HYPERTHERMOPHILIC BACTERIA FOLD BY ULTRAFAST, APPARENTLY TWO- STATE TRANSITIONS
1w4f	PERIPHERAL-SUBUNIT FROM MESOPHILIC, THERMOPHILIC AND HYPERTHERMOPHILIC BACTERIA FOLD BY ULTRAFAST, APPARENTLY TWO-STATE TRANSITIONS
1w4g	PERIPHERAL-SUBUNIT BINDING DOMAINS FROM MESOPHILIC, THERMOPHILIC, AND HYPERTHERMOPHILIC BACTERIA FOLD BY ULTRAFAST, APPARENTLY TWO- STATE FOLDING TRANSITIONS
1w4h	PERIPHERAL-SUBUNIT FROM MESOPHILIC, THERMOPHILIC AND HYPERTHERMOPHILIC BACTERIA FOLD BY ULTRAFAST, APPARENTLY TWO-STATE TRANSITIONS
1w88	THE CRYSTAL STRUCTURE OF PYRUVATE DEYDROGENASE E1(D180N,E183Q) BOUND TO THE PERIPHERAL SUBUNIT BINDING DOMAIN OF E2
2pdd	DIHYDROLIPOAMIDE ACETYLTRANSFERASE (E2P) SUBUNIT OF THE PYRUVATE DEHYDROGENASE (PDH) MULTIENZYME COMPLEX (PYRUVATE DECARBOXYLASE (E1P) / DIHYDROLIPOAMIDE DEHYDROGENASE (E3) 43 RESIDUE BINDING DOMAIN) (NMR, 35 STRUCTURES)
2pde	DIHYDROLIPOAMIDE ACETYLTRANSFERASE (E2P) SUBUNIT OF THE PYRUVATE DEHYDROGENASE (PDH) MULTIENZYME COMPLEX (PYRUVATE DECARBOXYLASE (E1P) / DIHYDROLIPOAMIDE DEHYDROGENASE (E3) 43 RESIDUE BINDING DOMAIN) (NMR, AVERAGE STRUCTURE)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 17)

Sites (17, 17)

SS Bonds (0, 0)

Cis Peptide Bonds (4, 4)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 2)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (4, 14)

CATH Domains (3, 13)

Pfam Domains (4, 14)

Gene Ontology (10, 17)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File