2PDE - JenaLib

Title :   THE HIGH RESOLUTION STRUCTURE OF THE PERIPHERAL SUBUNIT-BINDING DOMAIN OF DIHYDROLIPOAMIDE ACETYLTRANSFERASE FROM THE PYRUVATE DEHYDROGENASE MULTIENZYME COMPLEX OF BACILLUS STEAROTHERMOPHILUS

Authors :   Y. N. Kalia, S. M. Brocklehurst, D. S. Hipps, E. Appella, K. Sakaguchi, R

Date :   25 Nov 92 (Deposition) - 20 Dec 94 (Release) - 09 Nov 11 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A
NMR Structure *: A  (1x)

Keywords :   Oxido-Reductase, Acyltransferase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Y. N. Kalia, S. M. Brocklehurst, D. S. Hipps, E. Appella, K. Sakaguchi, R. N. Perham
The High-Resolution Structure Of The Peripheral Subunit-Binding Domain Of Dihydrolipoamide Acetyltransferas From The Pyruvate Dehydrogenase Multienzyme Complex Of Bacillus Stearothermophilus.
J. Mol. Biol. V. 230 323 1993
PubMed-ID: 8450544 | Reference-DOI: 10.1006/JMBI.1993.1145

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (3, 3)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 1)

NMR Structure (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PSBD	PS51826	Peripheral subunit-binding (PSBD) domain profile.	ODP2_GEOSE	130-167	1	A:2-39

NMR Structure * (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PSBD	PS51826	Peripheral subunit-binding (PSBD) domain profile.	ODP2_GEOSE	130-167	1	A:2-39

Exons (0, 0)

Sequences/Alignments

NMR Structure

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	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:43
 aligned with ODP2_GEOSE | P11961 from UniProtKB/Swiss-Prot  Length:428

    Alignment length:43
                                   138       148       158       168   
           ODP2_GEOSE   129 VIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLAGGA 171
               SCOP domains d2pdea_ A:                                  SCOP domains
               CATH domains 2pdeA00 A:1-43 Dihydrolipoamide Transferase CATH domains
               Pfam domains E3_binding-2pdeA01 A:1-37            ------ Pfam domains
         Sec.struct. author ......hhhhhhhhh.hhhhh..........hhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------- SAPs(SNPs)
                    PROSITE -PSBD  PDB: A:2-39 UniProt: 130-167    ---- PROSITE
                 Transcript ------------------------------------------- Transcript
                 2pde A   1 VIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLAGGA  43
                                    10        20        30        40

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Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (1, 1)

Pfam Domains (1, 1)

Gene Ontology (5, 5)

NMR Structure(hide GO term definitions)

Chain A (ODP2_GEOSE | P11961)

molecular function
	GO:0004742	dihydrolipoyllysine-residue acetyltransferase activity	Catalysis of the reaction: acetyl-CoA + dihydrolipoamide = CoA + S-acetyldihydrolipoamide.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
	GO:0016746	transferase activity, transferring acyl groups	Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
biological process
	GO:0006096	glycolytic process	The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

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	Cis Peptide Bonds
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