Chain A from PDB Type:DNA Length:31
2r0q A 1 AACGTATGATTAGGGTGTATATTAATTTATA 31
10 20 30
Chain B from PDB Type:DNA Length:31
2r0q B 32 TAAATTAATATACACCCTAATCATACGTTTA 62
41 51 61
Chain C from PDB Type:PROTEIN Length:193
aligned with BIN3_STAAU | P20384 from UniProtKB/Swiss-Prot Length:202
Alignment length:200
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
BIN3_STAAU 1 MIIGYARVSSLDQNLERQLENLKTFGAEKIFTEKQSGKSIENRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNEVIGNPLLDKFMKDLIIQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSPNAKDPQKRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDNG 200
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeee........hhhhhhhhhh....eeee..-------.hhhhhhhhhhh....eeee.hhhhhh.hhhhhhhhhhhhhhhh.eeee....hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) RECOMBINASES_3 PDB: C:1-143 UniProt: 1-143 --------------------------------------------------------- PROSITE (1)
PROSITE (2) ----RECOMBINA------------------------------------------RECOMBINASES_------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2r0q C 1 MIIGYARVSSLDQNLERQLENLKTFGAEKIFTEK-------NRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNEVIGNPLLDKFMKDLIIQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSPNAKDPQKRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDNG 200
10 20 30 | - | 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
34 42
Chain D from PDB Type:PROTEIN Length:191
aligned with BIN3_STAAU | P20384 from UniProtKB/Swiss-Prot Length:202
Alignment length:200
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
BIN3_STAAU 1 MIIGYARVSSLDQNLERQLENLKTFGAEKIFTEKQSGKSIENRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNEVIGNPLLDKFMKDLIIQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSPNAKDPQKRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDNG 200
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeee........hhhhhhhhhh....eeee..-------.hhhhhhhhhhh....eeee.hhhhhh.hhhhhhhhhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....--..........................hhhhhhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) RECOMBINASES_3 PDB: D:1-143 UniProt: 1-143 --------------------------------------------------------- PROSITE (1)
PROSITE (2) ----RECOMBINA------------------------------------------RECOMBINASES_------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2r0q D 1 MIIGYARVSSLDQNLERQLENLKTFGAEKIFTEK-------NRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNEVIGNPLLDKFMKDLIIQILAMVSEQERNESK--QAQGIQVAKEKGVYKGRPLLYSPNAKDPQKRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDNG 200
10 20 30 | - | 50 60 70 80 90 100 110 120 |- | 140 150 160 170 180 190 200
34 42 129 |
132
Chain E from PDB Type:PROTEIN Length:193
aligned with BIN3_STAAU | P20384 from UniProtKB/Swiss-Prot Length:202
Alignment length:200
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
BIN3_STAAU 1 MIIGYARVSSLDQNLERQLENLKTFGAEKIFTEKQSGKSIENRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNEVIGNPLLDKFMKDLIIQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSPNAKDPQKRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDNG 200
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeee........hhhhhhhhhhh...eeee..-------.hhhhhhhhhhh....eeee.hhhhhh.hhhhhhhhhhhhhhhh.eeee....hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) RECOMBINASES_3 PDB: E:1-143 UniProt: 1-143 --------------------------------------------------------- PROSITE (1)
PROSITE (2) ----RECOMBINA------------------------------------------RECOMBINASES_------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2r0q E 1 MIIGYARVSSLDQNLERQLENLKTFGAEKIFTEK-------NRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNEVIGNPLLDKFMKDLIIQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSPNAKDPQKRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDNG 200
10 20 30 | - | 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
34 42
Chain F from PDB Type:PROTEIN Length:191
aligned with BIN3_STAAU | P20384 from UniProtKB/Swiss-Prot Length:202
Alignment length:200
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
BIN3_STAAU 1 MIIGYARVSSLDQNLERQLENLKTFGAEKIFTEKQSGKSIENRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNEVIGNPLLDKFMKDLIIQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSPNAKDPQKRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDNG 200
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) -Resolvase-2r0qF05 F:2-145 -HTH_7-2r0qF01 F:147-199 - Pfam domains (1)
Pfam domains (2) -Resolvase-2r0qF06 F:2-145 -HTH_7-2r0qF02 F:147-199 - Pfam domains (2)
Pfam domains (3) -Resolvase-2r0qF07 F:2-145 -HTH_7-2r0qF03 F:147-199 - Pfam domains (3)
Pfam domains (4) -Resolvase-2r0qF08 F:2-145 -HTH_7-2r0qF04 F:147-199 - Pfam domains (4)
Sec.struct. author .eeeee........hhhhhhhhhh....eeee..-------.hhhhhhhhhhh....eeee.hhhhhh.hhhhhhhhhhhhhhhh.eeee....hhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.....--..........................hhhhhhhhhhhhhhhhh..hhhhhhhhh..hhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) RECOMBINASES_3 PDB: F:1-143 UniProt: 1-143 --------------------------------------------------------- PROSITE (1)
PROSITE (2) ----RECOMBINA------------------------------------------RECOMBINASES_------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2r0q F 1 MIIGYARVSSLDQNLERQLENLKTFGAEKIFTEK-------NRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNEVIGNPLLDKFMKDLIIQILAMVSEQERNESK--QAQGIQVAKEKGVYKGRPLLYSPNAKDPQKRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDNG 200
10 20 30 | - | 50 60 70 80 90 100 110 120 |- | 140 150 160 170 180 190 200
34 42 129 |
132
Chain G from PDB Type:DNA Length:31
2r0q G 1 AACGTATGATTAGGGTGTATATTAATTTATA 31
10 20 30
Chain H from PDB Type:DNA Length:31
2r0q H 32 TAAATTAATATACACCCTAATCATACGTTTA 62
41 51 61
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |