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(-) Description

Title :  STRUCTURE OF NAGST-2
 
Authors :  O. A. Asojo, M. Ngamelue, H. Homma, G. Goud, B. Zhan, P. J. Hotez
Date :  23 Jan 07  (Deposition) - 07 Aug 07  (Release) - 21 Mar 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,G  (1x)
Biol. Unit 2:  B,C  (1x)
Biol. Unit 3:  D,F  (1x)
Biol. Unit 4:  E,H  (1x)
Keywords :  Gst; Hookworm; Necator, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  O. A. Asojo, K. Homma, M. Sedlacek, M. Ngamelue, G. N. Goud, B. Zhan, V. Deumic, O. Asojo, P. J. Hotez
X-Ray Structures Of Na-Gst-1 And Na-Gst-2 Two Glutathione S-Transferase From The Human Hookworm Necator Americanus
Bmc Struct. Biol. V. 7 42 2007
PubMed-ID: 17594497  |  Reference-DOI: 10.1186/1472-6807-7-42

(-) Compounds

Molecule 1 - NA GLUTATHIONE S-TRANSFERASE 2
    Chains: A, B, C, D, E, F, G, H
    Engineered: YES
    Expression System: PICHIA PASTORIS
    Expression System Plasmid: PPICZAA
    Expression System Taxid: 4922
    Organism Scientific: NECATOR AMERICANUS
    Organism Taxid: 51031
    Synonym: NAGST-2

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): A     G 
Biological Unit 2 (1x):  BC     
Biological Unit 3 (1x):    D F  
Biological Unit 4 (1x):     E  H

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 84)

Asymmetric Unit (2, 84)
No.NameCountTypeFull Name
1EDO76Ligand/Ion1,2-ETHANEDIOL
2GSH8Ligand/IonGLUTATHIONE
Biological Unit 1 (2, 22)
No.NameCountTypeFull Name
1EDO20Ligand/Ion1,2-ETHANEDIOL
2GSH2Ligand/IonGLUTATHIONE
Biological Unit 2 (2, 21)
No.NameCountTypeFull Name
1EDO19Ligand/Ion1,2-ETHANEDIOL
2GSH2Ligand/IonGLUTATHIONE
Biological Unit 3 (2, 22)
No.NameCountTypeFull Name
1EDO20Ligand/Ion1,2-ETHANEDIOL
2GSH2Ligand/IonGLUTATHIONE
Biological Unit 4 (2, 19)
No.NameCountTypeFull Name
1EDO17Ligand/Ion1,2-ETHANEDIOL
2GSH2Ligand/IonGLUTATHIONE

(-) Sites  (83, 83)

Asymmetric Unit (83, 83)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREARG A:129 , GLU A:130BINDING SITE FOR RESIDUE EDO A 419
02AC2SOFTWAREPHE A:9 , ALA A:10 , TYR A:34 , THR A:35 , PHE A:36BINDING SITE FOR RESIDUE EDO A 420
03AC3SOFTWAREHOH A:1214BINDING SITE FOR RESIDUE EDO A 421
04AC4SOFTWARETYR A:105 , VAL A:109 , GLY A:166 , ILE A:167 , LYS A:205 , HOH A:1135 , HOH A:1176BINDING SITE FOR RESIDUE EDO A 422
05AC5SOFTWAREGSH A:999 , HOH A:1133BINDING SITE FOR RESIDUE EDO A 423
06AC6SOFTWAREALA A:110 , GSH A:999BINDING SITE FOR RESIDUE EDO A 424
07AC7SOFTWARELEU A:14 , ILE A:18 , SER A:64 , CYS A:159 , EDO A:426BINDING SITE FOR RESIDUE EDO A 425
08AC8SOFTWARELEU A:14 , PHE A:65 , TYR A:95 , EDO A:425 , HOH A:1102 , HOH A:1178 , HOH A:1197BINDING SITE FOR RESIDUE EDO A 426
09AC9SOFTWARETYR A:29 , ASP A:31 , TRP A:197 , HOH A:1166BINDING SITE FOR RESIDUE EDO A 427
10BC1SOFTWAREALA A:25 , GLY A:26 , GLN A:27BINDING SITE FOR RESIDUE EDO A 428
11BC2SOFTWAREGLN A:37 , HOH A:1041 , HOH A:1069 , HOH A:1112 , HOH A:1221BINDING SITE FOR RESIDUE EDO A 429
12BC3SOFTWARELYS A:138 , PHE A:139 , LYS A:142 , HOH A:1113 , HOH G:1148BINDING SITE FOR RESIDUE EDO A 452
13BC4SOFTWAREASP A:44 , GLU A:45 , MET A:46 , PRO A:47 , GLN A:60 , EDO G:452BINDING SITE FOR RESIDUE EDO A 454
14BC5SOFTWARETYR A:8 , PHE A:9 , LEU A:14 , TRP A:39 , LYS A:43 , GLN A:50 , ILE A:51 , GLN A:63 , SER A:64 , EDO A:423 , EDO A:424 , HOH A:1002 , ASP G:97BINDING SITE FOR RESIDUE GSH A 999
15BC6SOFTWAREARG B:129 , GLU B:130BINDING SITE FOR RESIDUE EDO B 419
16BC7SOFTWAREPHE B:9 , ALA B:10 , TYR B:34 , THR B:35 , PHE B:36BINDING SITE FOR RESIDUE EDO B 420
17BC8SOFTWARELYS B:205 , HOH B:1195BINDING SITE FOR RESIDUE EDO B 421
18BC9SOFTWARETYR B:105 , VAL B:109 , GLY B:166 , ILE B:167 , LYS B:205 , HOH B:1081 , HOH B:1104BINDING SITE FOR RESIDUE EDO B 422
19CC1SOFTWAREARG B:107 , VAL B:112 , GSH B:999BINDING SITE FOR RESIDUE EDO B 423
20CC2SOFTWAREGSH B:999 , HOH B:1244BINDING SITE FOR RESIDUE EDO B 424
21CC3SOFTWARELEU B:14 , PRO B:17 , SER B:64 , PHE B:65 , EDO B:426BINDING SITE FOR RESIDUE EDO B 425
22CC4SOFTWARELEU B:14 , PHE B:65 , TYR B:95 , EDO B:425 , HOH B:1114 , HOH B:1151 , HOH B:1184BINDING SITE FOR RESIDUE EDO B 426
23CC5SOFTWARETYR B:29 , TRP B:197 , HOH B:1125 , HOH B:1185BINDING SITE FOR RESIDUE EDO B 427
24CC6SOFTWAREALA B:25 , GLY B:26 , GLN B:27BINDING SITE FOR RESIDUE EDO B 428
25CC7SOFTWAREGLN B:37 , HOH B:1039 , HOH B:1099 , HOH B:1213 , HOH E:1079BINDING SITE FOR RESIDUE EDO B 430
26CC8SOFTWARELYS B:138 , PHE B:139 , LYS B:142 , HOH B:1108 , HOH B:1153 , HOH C:1085BINDING SITE FOR RESIDUE EDO B 452
27CC9SOFTWAREGLN B:60 , HOH B:1034 , HOH B:1049 , HOH B:1072 , HOH B:1124 , EDO C:452BINDING SITE FOR RESIDUE EDO B 453
28DC1SOFTWARETYR B:8 , PHE B:9 , LEU B:14 , TRP B:39 , LYS B:43 , GLN B:50 , ILE B:51 , GLN B:63 , SER B:64 , EDO B:423 , EDO B:424 , HOH B:1001 , ASP C:97BINDING SITE FOR RESIDUE GSH B 999
29DC2SOFTWAREGLN C:37 , PRO C:40 , HOH C:1210 , ARG G:107 , VAL G:112 , ASP G:113BINDING SITE FOR RESIDUE EDO C 424
30DC3SOFTWARELEU C:14 , PRO C:17 , ILE C:18 , SER C:64 , PHE C:65 , CYS C:159 , HOH C:1117BINDING SITE FOR RESIDUE EDO C 425
31DC4SOFTWARETYR C:29 , TRP C:197 , HOH C:1120BINDING SITE FOR RESIDUE EDO C 427
32DC5SOFTWAREALA C:25 , GLY C:26 , GLN C:27 , HOH C:1041BINDING SITE FOR RESIDUE EDO C 428
33DC6SOFTWAREEDO B:453 , HOH B:1124 , LYS C:138 , PHE C:139 , LYS C:142 , HOH C:1233BINDING SITE FOR RESIDUE EDO C 452
34DC7SOFTWAREASP B:97 , TYR C:8 , PHE C:9 , LEU C:14 , TRP C:39 , LYS C:43 , GLN C:50 , ILE C:51 , GLN C:63 , SER C:64 , HOH C:1022BINDING SITE FOR RESIDUE GSH C 999
35DC8SOFTWAREARG A:33 , TYR A:34 , HOH A:1087 , HIS D:3 , GLU D:30 , HOH D:1011 , HOH D:1047BINDING SITE FOR RESIDUE EDO D 418
36DC9SOFTWAREPRO D:179 , HOH F:1155BINDING SITE FOR RESIDUE EDO D 419
37EC1SOFTWAREARG D:189 , ARG D:201 , HOH D:1017 , HOH D:1107 , HOH D:1156BINDING SITE FOR RESIDUE EDO D 422
38EC2SOFTWARELEU D:14 , PRO D:17 , SER D:64 , PHE D:65 , CYS D:159 , EDO D:426BINDING SITE FOR RESIDUE EDO D 425
39EC3SOFTWAREGLY D:13 , LEU D:14 , PRO D:17 , TYR D:95 , EDO D:425 , HOH D:1082 , HOH D:1086 , HOH D:1097 , HOH D:1153BINDING SITE FOR RESIDUE EDO D 426
40EC4SOFTWARELYS A:41 , HOH A:1069 , TYR D:29 , ASP D:31 , TRP D:197 , HOH D:1070BINDING SITE FOR RESIDUE EDO D 427
41EC5SOFTWAREGLY D:26 , GLN D:27 , LYS D:28 , HOH D:1112 , HOH D:1179BINDING SITE FOR RESIDUE EDO D 428
42EC6SOFTWARELYS D:59 , GLN D:60 , EDO D:454 , HOH D:1089 , EDO F:452BINDING SITE FOR RESIDUE EDO D 453
43EC7SOFTWAREASP D:44 , GLU D:45 , MET D:46 , PRO D:47 , GLN D:60 , EDO D:453 , LYS F:138 , EDO F:452BINDING SITE FOR RESIDUE EDO D 454
44EC8SOFTWARETYR D:8 , PHE D:9 , LEU D:14 , TRP D:39 , LYS D:43 , GLN D:50 , ILE D:51 , PRO D:52 , GLN D:63 , SER D:64 , HOH D:1004 , ASP F:97BINDING SITE FOR RESIDUE GSH D 999
45EC9SOFTWARELEU E:14 , PRO E:17 , ILE E:18 , SER E:64 , PHE E:65 , EDO E:426BINDING SITE FOR RESIDUE EDO E 425
46FC1SOFTWAREGLY E:13 , LEU E:14 , PRO E:17 , TYR E:95 , ILE E:99 , EDO E:425 , HOH E:1101 , HOH E:1111BINDING SITE FOR RESIDUE EDO E 426
47FC2SOFTWARELYS B:41 , HOH B:1039 , TYR E:29 , ASP E:31 , TRP E:197 , HOH E:1050 , HOH E:1079BINDING SITE FOR RESIDUE EDO E 427
48FC3SOFTWAREGLY E:26 , GLN E:27 , LYS E:28 , HOH E:1087BINDING SITE FOR RESIDUE EDO E 428
49FC4SOFTWARELYS E:59 , GLN E:60 , EDO E:454 , EDO H:451 , EDO H:452BINDING SITE FOR RESIDUE EDO E 453
50FC5SOFTWAREASP E:44 , GLU E:45 , MET E:46 , PRO E:47 , GLN E:60 , EDO E:453 , HOH E:1187 , LYS H:138 , EDO H:452BINDING SITE FOR RESIDUE EDO E 454
51FC6SOFTWAREPHE E:83 , LEU E:87 , LYS E:142 , HOH E:1103 , LYS H:59 , GLN H:60BINDING SITE FOR RESIDUE EDO E 450
52FC7SOFTWARELYS E:142 , HOH E:1084 , HOH E:1103BINDING SITE FOR RESIDUE EDO E 452
53FC8SOFTWARETYR E:8 , PHE E:9 , LEU E:14 , TRP E:39 , LYS E:43 , GLN E:50 , ILE E:51 , PRO E:52 , GLN E:63 , SER E:64 , HOH E:1009 , HOH E:1019 , HOH E:1148 , HOH E:1150 , ASP H:97BINDING SITE FOR RESIDUE GSH E 999
54FC9SOFTWARELYS D:182 , LEU F:126 , ARG F:129 , ASP F:176 , HOH F:1153BINDING SITE FOR RESIDUE EDO F 418
55GC1SOFTWAREPRO F:40 , HOH F:1038 , HOH F:1175BINDING SITE FOR RESIDUE EDO F 419
56GC2SOFTWAREPHE F:9 , ALA F:10 , TYR F:34 , THR F:35 , PHE F:36 , HOH F:1189BINDING SITE FOR RESIDUE EDO F 420
57GC3SOFTWARELEU F:106 , VAL F:109 , ILE F:167 , LYS F:205 , HOH F:1082 , HOH F:1083 , HOH F:1112 , HOH F:1178BINDING SITE FOR RESIDUE EDO F 422
58GC4SOFTWAREPHE F:9 , TRP F:39 , VAL F:112 , HOH F:1180BINDING SITE FOR RESIDUE EDO F 424
59GC5SOFTWARELEU F:14 , PRO F:17 , ILE F:18 , SER F:64 , PHE F:65BINDING SITE FOR RESIDUE EDO F 425
60GC6SOFTWARETYR F:29 , TRP F:197 , HOH F:1068BINDING SITE FOR RESIDUE EDO F 427
61GC7SOFTWAREGLU F:30 , ASP F:31BINDING SITE FOR RESIDUE EDO F 432
62GC8SOFTWARESER F:143 , VAL F:149 , GLY F:150 , EDO F:451 , HOH F:1022BINDING SITE FOR RESIDUE EDO F 450
63GC9SOFTWAREHOH D:1025 , LEU F:87 , PHE F:139 , LYS F:142 , EDO F:450 , EDO F:452 , HOH F:1022BINDING SITE FOR RESIDUE EDO F 451
64HC1SOFTWAREEDO D:453 , EDO D:454 , LYS F:138 , PHE F:139 , LYS F:142 , EDO F:451BINDING SITE FOR RESIDUE EDO F 452
65HC2SOFTWAREASP D:97 , TYR F:8 , PHE F:9 , LEU F:14 , TRP F:39 , LYS F:43 , GLN F:50 , ILE F:51 , PRO F:52 , GLN F:63 , SER F:64 , HOH F:1029 , HOH F:1163 , HOH F:1180BINDING SITE FOR RESIDUE GSH F 999
66HC3SOFTWAREGLN C:114 , ALA G:10 , THR G:204 , LYS G:205 , HOH G:1122 , HOH G:1221BINDING SITE FOR RESIDUE EDO G 420
67HC4SOFTWARELEU G:106 , VAL G:109 , ALA G:110 , HOH G:1063BINDING SITE FOR RESIDUE EDO G 422
68HC5SOFTWARELEU G:14 , PRO G:17 , ILE G:18 , SER G:64 , PHE G:65 , EDO G:426BINDING SITE FOR RESIDUE EDO G 425
69HC6SOFTWAREGLY G:13 , LEU G:14 , PRO G:17 , TYR G:95 , ILE G:99 , EDO G:425 , HOH G:1023 , HOH G:1076 , HOH G:1085 , HOH G:1185BINDING SITE FOR RESIDUE EDO G 426
70HC7SOFTWARETYR G:29 , TRP G:197 , HOH G:1097BINDING SITE FOR RESIDUE EDO G 427
71HC8SOFTWARELEU G:87 , LYS G:142 , HOH G:1017 , HOH G:1041 , HOH G:1100 , HOH G:1104 , HOH G:1197BINDING SITE FOR RESIDUE EDO G 450
72HC9SOFTWAREEDO A:454 , LYS G:142 , HOH G:1034BINDING SITE FOR RESIDUE EDO G 452
73IC1SOFTWAREASP A:97 , TYR G:8 , PHE G:9 , LEU G:14 , TRP G:39 , LYS G:43 , GLN G:50 , ILE G:51 , GLN G:63 , SER G:64 , HOH G:1234BINDING SITE FOR RESIDUE GSH G 999
74IC2SOFTWAREVAL H:109 , ILE H:167 , LYS H:205 , PHE H:206 , HOH H:1074 , HOH H:1106 , HOH H:1131 , HOH H:1153BINDING SITE FOR RESIDUE EDO H 422
75IC3SOFTWAREGLY H:111 , VAL H:112BINDING SITE FOR RESIDUE EDO H 423
76IC4SOFTWARELEU H:14 , SER H:64 , PHE H:65 , EDO H:426BINDING SITE FOR RESIDUE EDO H 425
77IC5SOFTWAREGLY H:13 , LEU H:14 , PRO H:17 , TYR H:95 , ILE H:99 , EDO H:425 , HOH H:1020 , HOH H:1095BINDING SITE FOR RESIDUE EDO H 426
78IC6SOFTWARELYS H:28 , TYR H:29 , EDO H:429 , HOH H:1177BINDING SITE FOR RESIDUE EDO H 427
79IC7SOFTWAREPHE H:22 , ALA H:23 , GLN H:27 , TYR H:29 , TRP H:197 , EDO H:427 , HOH H:1026BINDING SITE FOR RESIDUE EDO H 429
80IC8SOFTWAREPHE H:139 , SER H:143 , LEU H:148 , VAL H:149 , GLY H:150 , EDO H:451BINDING SITE FOR RESIDUE EDO H 450
81IC9SOFTWAREEDO E:453 , LEU H:87 , PHE H:139 , LYS H:142 , EDO H:450 , EDO H:452 , HOH H:1009BINDING SITE FOR RESIDUE EDO H 451
82JC1SOFTWAREEDO E:453 , EDO E:454 , PHE H:139 , LYS H:142 , EDO H:451BINDING SITE FOR RESIDUE EDO H 452
83JC2SOFTWAREASP E:97 , TYR H:8 , PHE H:9 , LEU H:14 , TRP H:39 , LYS H:43 , GLN H:50 , ILE H:51 , GLN H:63 , SER H:64 , HOH H:1006 , HOH H:1165BINDING SITE FOR RESIDUE GSH H 999

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2ON5)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Ile A:51 -Pro A:52
2Ile B:51 -Pro B:52
3Ile C:51 -Pro C:52
4Ile D:51 -Pro D:52
5Ile E:51 -Pro E:52
6Ile F:51 -Pro F:52
7Ile G:51 -Pro G:52
8Ile H:51 -Pro H:52

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2ON5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2ON5)

(-) Exons   (0, 0)

(no "Exon" information available for 2ON5)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:206
 aligned with D3U1A6_NECAM | D3U1A6 from UniProtKB/TrEMBL  Length:206

    Alignment length:206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
         D3U1A6_NECAM     1 MVHYKLTYFAGRGLAEPIRQIFALAGQKYEDVRYTFQEWPKHKDEMPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIETRPETKF 206
               SCOP domains d2on5a1 A:1-77 automated matches                                             d2on5a2 A:78-206 automated matches                                                                                                SCOP domains
               CATH domains 2on5A01 A:1-75,A:191-206 Glutaredoxin                                      -------------------------------------------------------------------------------------------------------------------2on5A01          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee..hhhhhhhhhhhhhhh...eeeee...hhhhhhhhh......eeee..eeeehhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2on5 A   1 MVHYKLTYFAGRGLAEPIRQIFALAGQKYEDVRYTFQEWPKHKDEMPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIETRPETKF 206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      


Chain B from PDB  Type:PROTEIN  Length:206
 aligned with D3U1A6_NECAM | D3U1A6 from UniProtKB/TrEMBL  Length:206

    Alignment length:206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
         D3U1A6_NECAM     1 MVHYKLTYFAGRGLAEPIRQIFALAGQKYEDVRYTFQEWPKHKDEMPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIETRPETKF 206
               SCOP domains d2on5b1 B:1-77 automated matches                                             d2on5b2 B:78-206 automated matches                                                                                                SCOP domains
               CATH domains 2on5B01 B:1-75,B:191-206 Glutaredoxin                                      -------------------------------------------------------------------------------------------------------------------2on5B01          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee..hhhhhhhhhhhhhhh...eeeee...hhhhhhhhh......eeee..eeeehhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2on5 B   1 MVHYKLTYFAGRGLAEPIRQIFALAGQKYEDVRYTFQEWPKHKDEMPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIETRPETKF 206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      


Chain C from PDB  Type:PROTEIN  Length:206
 aligned with D3U1A6_NECAM | D3U1A6 from UniProtKB/TrEMBL  Length:206

    Alignment length:206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
         D3U1A6_NECAM     1 MVHYKLTYFAGRGLAEPIRQIFALAGQKYEDVRYTFQEWPKHKDEMPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIETRPETKF 206
               SCOP domains d2on5c1 C:1-77 automated matches                                             d2on5c2 C:78-206 automated matches                                                                                                SCOP domains
               CATH domains 2on5C01 C:1-75,C:191-206 Glutaredoxin                                      -------------------------------------------------------------------------------------------------------------------2on5C01          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee..hhhhhhhhhhhhhhh...eeeee....hhhhhhhh......eeee..eeeehhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2on5 C   1 MVHYKLTYFAGRGLAEPIRQIFALAGQKYEDVRYTFQEWPKHKDEMPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIETRPETKF 206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      


Chain D from PDB  Type:PROTEIN  Length:206
 aligned with D3U1A6_NECAM | D3U1A6 from UniProtKB/TrEMBL  Length:206

    Alignment length:206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
         D3U1A6_NECAM     1 MVHYKLTYFAGRGLAEPIRQIFALAGQKYEDVRYTFQEWPKHKDEMPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIETRPETKF 206
               SCOP domains d2on5d1 D:1-77 automated matches                                             d2on5d2 D:78-206 automated matches                                                                                                SCOP domains
               CATH domains 2on5D01 D:1-75,D:191-206 Glutaredoxin                                      -------------------------------------------------------------------------------------------------------------------2on5D01          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee..hhhhhhhhhhhhhhh...eeeee...hhhhhhh........eeee..eeeehhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2on5 D   1 MVHYKLTYFAGRGLAEPIRQIFALAGQKYEDVRYTFQEWPKHKDEMPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIETRPETKF 206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      


Chain E from PDB  Type:PROTEIN  Length:206
 aligned with D3U1A6_NECAM | D3U1A6 from UniProtKB/TrEMBL  Length:206

    Alignment length:206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
         D3U1A6_NECAM     1 MVHYKLTYFAGRGLAEPIRQIFALAGQKYEDVRYTFQEWPKHKDEMPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIETRPETKF 206
               SCOP domains d2on5e1 E:1-77 automated matches                                             d2on5e2 E:78-206 automated matches                                                                                                SCOP domains
               CATH domains 2on5E01 E:1-75,E:191-206 Glutaredoxin                                      -------------------------------------------------------------------------------------------------------------------2on5E01          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee..hhhhhhhhhhhhhhh...eeeee....hhhhhhhh......eeee..eeeehhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2on5 E   1 MVHYKLTYFAGRGLAEPIRQIFALAGQKYEDVRYTFQEWPKHKDEMPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIETRPETKF 206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      


Chain F from PDB  Type:PROTEIN  Length:206
 aligned with D3U1A6_NECAM | D3U1A6 from UniProtKB/TrEMBL  Length:206

    Alignment length:206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
         D3U1A6_NECAM     1 MVHYKLTYFAGRGLAEPIRQIFALAGQKYEDVRYTFQEWPKHKDEMPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIETRPETKF 206
               SCOP domains d2on5f1 F:1-77 automated matches                                             d2on5f2 F:78-206 automated matches                                                                                                SCOP domains
               CATH domains 2on5F01 F:1-75,F:191-206 Glutaredoxin                                      -------------------------------------------------------------------------------------------------------------------2on5F01          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee..hhhhhhhhhhhhhhh...eeeee...hhhhhhhhh......eeee..eeeehhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2on5 F   1 MVHYKLTYFAGRGLAEPIRQIFALAGQKYEDVRYTFQEWPKHKDEMPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIETRPETKF 206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      


Chain G from PDB  Type:PROTEIN  Length:206
 aligned with D3U1A6_NECAM | D3U1A6 from UniProtKB/TrEMBL  Length:206

    Alignment length:206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
         D3U1A6_NECAM     1 MVHYKLTYFAGRGLAEPIRQIFALAGQKYEDVRYTFQEWPKHKDEMPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIETRPETKF 206
               SCOP domains d2on5g1 G:1-77 automated matches                                             d2on5g2 G:78-206 automated matches                                                                                                SCOP domains
               CATH domains 2on5G01 G:1-75,G:191-206 Glutaredoxin                                      -------------------------------------------------------------------------------------------------------------------2on5G01          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee..hhhhhhhhhhhhhhh...eeeee....hhhhhhhh......eeee..eeeehhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2on5 G   1 MVHYKLTYFAGRGLAEPIRQIFALAGQKYEDVRYTFQEWPKHKDEMPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIETRPETKF 206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      


Chain H from PDB  Type:PROTEIN  Length:206
 aligned with D3U1A6_NECAM | D3U1A6 from UniProtKB/TrEMBL  Length:206

    Alignment length:206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
         D3U1A6_NECAM     1 MVHYKLTYFAGRGLAEPIRQIFALAGQKYEDVRYTFQEWPKHKDEMPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIETRPETKF 206
               SCOP domains d2on5h1 H:1-77 automated matches                                             d2on5h2 H:78-206 automated matches                                                                                                SCOP domains
               CATH domains 2on5H01 H:1-75,H:191-206 Glutaredoxin                                      -------------------------------------------------------------------------------------------------------------------2on5H01          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee..hhhhhhhhhhhhhhh...eeeee....hhhhhhhh......eeee..eeeehhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2on5 H   1 MVHYKLTYFAGRGLAEPIRQIFALAGQKYEDVRYTFQEWPKHKDEMPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIETRPETKF 206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 16)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 8)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: 3-Layer(aba) Sandwich (12045)
(-)
Topology: Glutaredoxin (620)
(-)
Homologous Superfamily: Glutaredoxin (617)
(-)
Necator americanus. Organism_taxid: 51031. (2)
1a2on5A01A:1-75,A:191-206
1b2on5B01B:1-75,B:191-206
1c2on5C01C:1-75,C:191-206
1d2on5D01D:1-75,D:191-206
1e2on5E01E:1-75,E:191-206
1f2on5F01F:1-75,F:191-206
1g2on5G01G:1-75,G:191-206
1h2on5H01H:1-75,H:191-206

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2ON5)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (D3U1A6_NECAM | D3U1A6)
molecular function
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

1tw9 2on7