Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym.Unit - manually
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
collapse expand < >
Image Asym.Unit - manually
Asym.Unit - manually  (Jmol Viewer)
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)

(-) Description

Title :  MOEA R137Q
 
Authors :  J. Nicolas, S. Xiang, H. Schindelin, K. V. Rajagopalan
Date :  31 Oct 06  (Deposition) - 16 Jan 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Molybdopterin, Mpt, Moco, Molybdenum, Moea, Moga, Gephyrin, Cnx1, Cinnamon, Biosynthetic Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. D. Nichols, S. Xiang, H. Schindelin, K. V. Rajagopalan
Mutational Analysis Of Escherichia Coli Moea: Two Functiona Activities Map To The Active Site Cleft.
Biochemistry V. 46 78 2007
PubMed-ID: 17198377  |  Reference-DOI: 10.1021/BI061551Q

(-) Compounds

Molecule 1 - MOLYBDOPTERIN BIOSYNTHESIS PROTEIN MOEA
    ChainsA, B, C, D
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET11A
    Expression System StrainAH69 (DE3)
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneMOEA, BISB, CHLE, NARE
    MutationYES
    Organism ScientificESCHERICHIA COLI
    Organism Taxid562

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (1x)AB  
Biological Unit 2 (1x)  CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 14)

Asymmetric Unit (1, 14)
No.NameCountTypeFull Name
1GOL14Ligand/IonGLYCEROL
Biological Unit 1 (1, 8)
No.NameCountTypeFull Name
1GOL8Ligand/IonGLYCEROL
Biological Unit 2 (1, 6)
No.NameCountTypeFull Name
1GOL6Ligand/IonGLYCEROL

(-) Sites  (14, 14)

Asymmetric Unit (14, 14)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:266 , GLY A:269 , GLU A:270 , HOH A:1151BINDING SITE FOR RESIDUE GOL A 901
02AC2SOFTWAREPHE D:377 , SER D:378 , LEU D:379 , GLY D:380 , PHE D:408 , HOH D:1029BINDING SITE FOR RESIDUE GOL D 902
03AC3SOFTWAREHOH A:958 , PHE B:377 , SER B:378 , LEU B:379 , GLY B:380 , PHE B:408 , HOH B:936BINDING SITE FOR RESIDUE GOL B 903
04AC4SOFTWARELEU A:189 , ASP A:203 , THR A:204 , ASN A:205 , GLY A:251 , GLY A:299 , HOH A:957BINDING SITE FOR RESIDUE GOL A 904
05AC5SOFTWARELEU A:48 , ASP A:49 , GLY A:52 , ARG A:139BINDING SITE FOR RESIDUE GOL A 905
06AC6SOFTWAREILE A:226 , ALA A:232 , ALA A:235 , ALA A:236 , GLU A:239 , HOH A:936 , HOH A:948 , HOH A:1002 , ILE D:226 , HOH D:999 , HOH D:1010BINDING SITE FOR RESIDUE GOL A 906
07AC7SOFTWAREASP B:49 , SER B:144 , ALA B:145BINDING SITE FOR RESIDUE GOL B 907
08AC8SOFTWARETHR A:185 , GLU A:188 , GLY A:252 , ASP A:259 , HOH A:983 , HOH A:1052 , HOH A:1072 , HOH A:1106BINDING SITE FOR RESIDUE GOL A 908
09AC9SOFTWAREARG C:155 , ALA D:406 , GLY D:409 , HOH D:1013BINDING SITE FOR RESIDUE GOL D 909
10BC1SOFTWAREPRO B:23 , LEU B:24 , GLY B:321 , HOH B:947BINDING SITE FOR RESIDUE GOL B 910
11BC2SOFTWAREPRO C:47 , LEU C:167 , GLY C:168 , GLY D:193 , GLN D:194 , TYR D:202BINDING SITE FOR RESIDUE GOL C 911
12BC3SOFTWAREILE D:201 , ASP D:203 , THR D:204 , ASN D:205 , GLY D:251 , GLY D:299BINDING SITE FOR RESIDUE GOL D 912
13BC4SOFTWAREARG D:338 , LYS D:340 , GLN D:349 , THR D:365 , GLY D:367 , HOH D:929 , HOH D:1056BINDING SITE FOR RESIDUE GOL D 913
14BC5SOFTWAREHOH D:1035BINDING SITE FOR RESIDUE GOL D 914

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2NQQ)

(-) Cis Peptide Bonds  (7, 7)

Asymmetric Unit
No.Residues
1Val A:50 -Pro A:51
2Lys A:279 -Pro A:280
3Val B:50 -Pro B:51
4Lys B:279 -Pro B:280
5Val C:50 -Pro C:51
6Lys C:279 -Pro C:280
7Lys D:279 -Pro D:280

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2NQQ)

(-) PROSITE Motifs  (1, 4)

Asymmetric Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1MOCF_BIOSYNTHESIS_2PS01079 Molybdenum cofactor biosynthesis proteins signature 2.MOEA_ECOLI254-287
 
 
 
  4A:254-287
B:254-287
C:254-287
D:254-287
Biological Unit 1 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1MOCF_BIOSYNTHESIS_2PS01079 Molybdenum cofactor biosynthesis proteins signature 2.MOEA_ECOLI254-287
 
 
 
  2A:254-287
B:254-287
-
-
Biological Unit 2 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1MOCF_BIOSYNTHESIS_2PS01079 Molybdenum cofactor biosynthesis proteins signature 2.MOEA_ECOLI254-287
 
 
 
  2-
-
C:254-287
D:254-287

(-) Exons   (0, 0)

(no "Exon" information available for 2NQQ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:403
 aligned with MOEA_ECOLI | P12281 from UniProtKB/Swiss-Prot  Length:411

    Alignment length:403
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406   
           MOEA_ECOLI     7 LMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQMDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGNVEVGEWVEVEPFNALFG 409
               SCOP domains d2nqqa2 A:7-177 Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains                                                                               d2nqqa3 A:178-326 MoeA, central domain                                                                                                               d2nqqa1 A:327-409 Molybdenum cofactor biosynthesis protein MoeA, C-terminal domain  SCOP domains
               CATH domains 2nqqA01             2nqqA02                 2nqqA03 A:51-142 Molybdopterin biosynthesis moea protein, domain 3.                         2nqqA02 A:27-50,A:143-175        2nqqA01 A:7-26,A:176-328,A:403-409 Molybdenum Cofactor Biosythetic Enzyme; Chain A                                                                       2nqqA04 A:329-402 MoeA C-terminal domain-like                             2nqqA01 CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh.....eeeee.hhh........ee.........ee...eeeehhhhhhh.....eeeee..............eeee...........eeee.hhh..................ee..........eee.........hhhhhhhh...eeeee...eeeeeee...ee..........ee.hhhhhhhhhhhhh..eeeeeeee..hhhhhhhhhhhhhhhh.eeeeee.......hhhhhhhhhhheeeeee..ee...eeeeee....eeee...hhhhhhhhhhhhhhhhhhhhh..........eeeee..........eeeeeeeeee.....eeeee.........hhhhhh.eeeee...........eeeeee.hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MOCF_BIOSYNTHESIS_2  PDB: A:254-28-------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nqq A   7 LMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQMDNGVRFTAEVRSGQNIQRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGNVEVGEWVEVEPFNALFG 409
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406   

Chain B from PDB  Type:PROTEIN  Length:403
 aligned with MOEA_ECOLI | P12281 from UniProtKB/Swiss-Prot  Length:411

    Alignment length:403
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406   
           MOEA_ECOLI     7 LMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQMDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGNVEVGEWVEVEPFNALFG 409
               SCOP domains d2nqqb2 B:7-177 Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains                                                                               d2nqqb3 B:178-326 MoeA, central domain                                                                                                               d2nqqb1 B:327-409 Molybdenum cofactor biosynthesis protein MoeA, C-terminal domain  SCOP domains
               CATH domains 2nqqB01             2nqqB02                 2nqqB03 B:51-142 Molybdopterin biosynthesis moea protein, domain 3.                         2nqqB02 B:27-50,B:143-175        2nqqB01 B:7-26,B:176-328,B:403-409 Molybdenum Cofactor Biosythetic Enzyme; Chain A                                                                       2nqqB04 B:329-402 MoeA C-terminal domain-like                             2nqqB01 CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh.....eeeee.hhh........ee.........ee...eeee.hhhhhh.....eeeee..............eeee...........eee....eee....eee.........ee..........eee.........hhhhhhhh...eeeee...eeeeeee...ee..........ee.hhhhhhhhhhhhhh.eeeeeeee..hhhhhhhhhhhhhhhh.eeeeee.......hhhhhhhhhhheeeeee..ee...eeeeee....eeee...hhhhhhhhhhhhhhhhhhhhh..........eeeee..........eeeeeeeeee.....eeeee.........hhhhhh.eeeee...........eeeeee.hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MOCF_BIOSYNTHESIS_2  PDB: B:254-28-------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nqq B   7 LMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQMDNGVRFTAEVRSGQNIQRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGNVEVGEWVEVEPFNALFG 409
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406   

Chain C from PDB  Type:PROTEIN  Length:403
 aligned with MOEA_ECOLI | P12281 from UniProtKB/Swiss-Prot  Length:411

    Alignment length:403
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406   
           MOEA_ECOLI     7 LMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQMDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGNVEVGEWVEVEPFNALFG 409
               SCOP domains d2nqqc2 C:7-177 Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains                                                                               d2nqqc3 C:178-326 MoeA, central domain                                                                                                               d2nqqc1 C:327-409 Molybdenum cofactor biosynthesis protein MoeA, C-terminal domain  SCOP domains
               CATH domains 2nqqC01             2nqqC02                 2nqqC03 C:51-142 Molybdopterin biosynthesis moea protein, domain 3.                         2nqqC02 C:27-50,C:143-175        2nqqC01 C:7-26,C:176-328,C:403-409 Molybdenum Cofactor Biosythetic Enzyme; Chain A                                                                       2nqqC04 C:329-402 MoeA C-terminal domain-like                             2nqqC01 CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh......eeeee.hhh........ee.........ee...eeeehhhhhhh.....eeeee..............eeee...........eeee...eee....eee.........ee..........eee.........hhhhhhhh...eeeee...eeeeeee...ee..........ee.hhhhhhhhhhhhh..eeeeeeee..hhhhhhhhhhhhhhhh.eeee.........hhhhhhhhhheeeeeee..ee...eeeeeee...eeee...hhhhhhhhhhhhhhhhhhhhh..........eeeee..........eeeeeeeeee.....eeeee.........hhhhhh.eeeee...........eeeeee.hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MOCF_BIOSYNTHESIS_2  PDB: C:254-28-------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nqq C   7 LMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQMDNGVRFTAEVRSGQNIQRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGNVEVGEWVEVEPFNALFG 409
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406   

Chain D from PDB  Type:PROTEIN  Length:403
 aligned with MOEA_ECOLI | P12281 from UniProtKB/Swiss-Prot  Length:411

    Alignment length:403
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406   
           MOEA_ECOLI     7 LMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQMDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGNVEVGEWVEVEPFNALFG 409
               SCOP domains d2nqqd2 D:7-177 Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains                                                                               d2nqqd3 D:178-326 MoeA, central domain                                                                                                               d2nqqd1 D:327-409 Molybdenum cofactor biosynthesis protein MoeA, C-terminal domain  SCOP domains
               CATH domains 2nqqD01             2nqqD02                 2nqqD03 D:51-142 Molybdopterin biosynthesis moea protein, domain 3.                         2nqqD02 D:27-50,D:143-175        2nqqD01 D:7-26,D:176-328,D:403-409 Molybdenum Cofactor Biosythetic Enzyme; Chain A                                                                       2nqqD04 D:329-402 MoeA C-terminal domain-like                             2nqqD01 CATH domains
           Pfam domains (1) MoeA_N-2nqqD09 D:7-168                                                                                                                                            ------------MoCF_biosynth-2nqqD01 D:181-318                                                                                                           -------------MoeA_C-2nqqD05 D:332-404                                                 ----- Pfam domains (1)
           Pfam domains (2) MoeA_N-2nqqD10 D:7-168                                                                                                                                            ------------MoCF_biosynth-2nqqD02 D:181-318                                                                                                           -------------MoeA_C-2nqqD06 D:332-404                                                 ----- Pfam domains (2)
           Pfam domains (3) MoeA_N-2nqqD11 D:7-168                                                                                                                                            ------------MoCF_biosynth-2nqqD03 D:181-318                                                                                                           -------------MoeA_C-2nqqD07 D:332-404                                                 ----- Pfam domains (3)
           Pfam domains (4) MoeA_N-2nqqD12 D:7-168                                                                                                                                            ------------MoCF_biosynth-2nqqD04 D:181-318                                                                                                           -------------MoeA_C-2nqqD08 D:332-404                                                 ----- Pfam domains (4)
         Sec.struct. author ..hhhhhhhhhhhh......eeeee.hhh........ee.........ee...eee...............eee...............eee.............ee.hhh..................ee..........eee.........hhhhhhh....eeeee...eeeeeee...ee..........ee.hhhhhhhhhhhhh..eeeeeeee..hhhhhhhhhhhhhhhh.eeeeee.......hhhhhhhhhhheeeeee..ee...eeeeee....eeee...hhhhhhhhhhhhhhhhhhhhhh.........eeeee..........eeeeeeeeee.....eeeee.........hhhhhh.eeeee...........eeeeee...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MOCF_BIOSYNTHESIS_2  PDB: D:254-28-------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nqq D   7 LMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQMDNGVRFTAEVRSGQNIQRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGNVEVGEWVEVEPFNALFG 409
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406   

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 12)

Asymmetric Unit

(-) CATH Domains  (4, 16)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (3, 12)

Asymmetric Unit

(-) Gene Ontology  (9, 9)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (MOEA_ECOLI | P12281)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0061598    molybdopterin adenylyltransferase activity    Catalysis of the reaction ATP + molybdopterin = diphosphate + adenylyl-molybdopterin.
    GO:0061599    molybdopterin molybdotransferase activity    Catalysis of the reaction adenylyl-molybdopterin + molybdate = molybdenum cofactor + AMP.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0006777    Mo-molybdopterin cofactor biosynthetic process    The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands.
    GO:0018315    molybdenum incorporation into molybdenum-molybdopterin complex    The incorporation of molybdenum into a molybdenum-molybdopterin complex.
    GO:0032324    molybdopterin cofactor biosynthetic process    The chemical reactions and pathways resulting in the formation of the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.
cellular component
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    GOL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Lys A:279 - Pro A:280   [ RasMol ]  
    Lys B:279 - Pro B:280   [ RasMol ]  
    Lys C:279 - Pro C:280   [ RasMol ]  
    Lys D:279 - Pro D:280   [ RasMol ]  
    Val A:50 - Pro A:51   [ RasMol ]  
    Val B:50 - Pro B:51   [ RasMol ]  
    Val C:50 - Pro C:51   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  2nqq
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  MOEA_ECOLI | P12281
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  MOEA_ECOLI | P12281
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MOEA_ECOLI | P122811fc5 1g8l 1g8r 2nqk 2nqm 2nqn 2nqr 2nqs 2nqu 2nqv 2nro 2nrp 2nrs

(-) Related Entries Specified in the PDB File

1fc5 1g8l 1g8r 1uz5 1wu2 2nqk 2nqm 2nqn 2nqr 2nqs 2nqu 2nqv