Chain A from PDB Type:PROTEIN Length:105
aligned with AMCY_PARDE | P22364 from UniProtKB/Swiss-Prot Length:131
Alignment length:105
36 46 56 66 76 86 96 106 116 126
AMCY_PARDE 27 DKATIPSESPFAAAEVADGAIVVDIAKMKYETPELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGPMMKKEQAYSLTFTEAGTYDYHCTPHPFMRGKVVVE 131
SCOP domains d2j56a_ A: Amicyanin SCOP domains
CATH domains 2j56A00 A:1-105 Cupredoxins - blue copper proteins CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..ee......ee........eeeeee..ee...eeee....eeeeee........ee.........ee.......eeeeeee...eeeeeee..eeeeeeeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------COPPER_BLUE ------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------- Transcript
2j56 A 1 DKATIPSESPFAAAEVADGAIVVDIAKMKYETPELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGPMMKKEQAYSLTFTEAGTYDYHCTPHPFMRGKVVVE 105
10 20 30 40 50 60 70 80 90 100
Chain B from PDB Type:PROTEIN Length:105
aligned with AMCY_PARDE | P22364 from UniProtKB/Swiss-Prot Length:131
Alignment length:105
36 46 56 66 76 86 96 106 116 126
AMCY_PARDE 27 DKATIPSESPFAAAEVADGAIVVDIAKMKYETPELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGPMMKKEQAYSLTFTEAGTYDYHCTPHPFMRGKVVVE 131
SCOP domains d2j56b_ B: Amicyanin SCOP domains
CATH domains 2j56B00 B:1-105 Cupredoxins - blue copper proteins CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..ee......ee........eeeeee..ee....eee....eeeeee........ee.........ee.......eeeeeee...eeeeeee..eeeeeeeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------COPPER_BLUE ------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------- Transcript
2j56 B 1 DKATIPSESPFAAAEVADGAIVVDIAKMKYETPELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGPMMKKEQAYSLTFTEAGTYDYHCTPHPFMRGKVVVE 105
10 20 30 40 50 60 70 80 90 100
Chain H from PDB Type:PROTEIN Length:375
aligned with DHMH_PARDE | P29894 from UniProtKB/Swiss-Prot Length:417
Alignment length:375
52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412
DHMH_PARDE 43 ETQGQAAARAAAADLAAGQDDEPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRLLVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 417
SCOP domains d2j56h_ H: automated matches SCOP domains
CATH domains 2j56H00 H:12-386 YVTN repeat-like/Quinoprotein amine dehydrogenase CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhh................eeeeee.......eeeeeee....eeeeeeee....eeee......eeeeeeeeee..eeeeeeeeeee......eeeeeee..............eee.....eeeeee.....eeeeee....eeeeeee...eeeeeeee..eeeeee....eeeee.......eeee...............eee....eeeee....eeeeee......eeeeeee..hhhhhhh.eee.....eeee....eeeeeeee.........eeeeeeee.....eeeeeeeeeee.eeee......eeeeee....eeeeee.....eeeee........eee..... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2j56 H 12 ETQGQAAARAAAADLAAGQDDEPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 386
21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381
Chain J from PDB Type:PROTEIN Length:375
aligned with DHMH_PARDE | P29894 from UniProtKB/Swiss-Prot Length:417
Alignment length:375
52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412
DHMH_PARDE 43 ETQGQAAARAAAADLAAGQDDEPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRLLVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 417
SCOP domains d2j56j_ J: automated matches SCOP domains
CATH domains 2j56J00 J:12-386 YVTN repeat-like/Quinoprotein amine dehydrogenase CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhh................eeeeee.......eeeeeee....eeeeeeee....eeee......eeeeeeeeee..eeeeeeeeeee......eeeeeee..............eee.....eeeeee.....eeeeee....eeeeeee...eeeeeeee..eeeeee....eeeee.......eeee...............eee....eeeee....eeeeee......ee...ee..hhhhhhh.eee.....eeee....eeeeeeee.........eeeeeeee.....eeeeeeeeeee.eeee......eeeeee....eeeeee.....eeeee........eee..... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2j56 J 12 ETQGQAAARAAAADLAAGQDDEPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 386
21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381
Chain L from PDB Type:PROTEIN Length:125
aligned with DHML_PARDE | P22619 from UniProtKB/Swiss-Prot Length:188
Alignment length:125
73 83 93 103 113 123 133 143 153 163 173 183
DHML_PARDE 64 TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATASWVASCYNPTDGQSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDIIWCFGAEDDAMTYHCTISPIVGKAS 188
SCOP domains d2j56l_ L: automated matches SCOP domains
CATH domains 2j56L00 L:7-131 Electron Transport Ethylamine Dehydrogenase CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...................hhhh..eee.hhhhh..........ee......eeeee....eeeee...eee........eee.........hhhhh........hhhhh..eeee...eeeeee Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
2j56 L 7 TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATASwVASCYNPTDGQSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDIIWCFGAEDDAMTYHCTISPIVGKAS 131
16 26 36 46 56| 66 76 86 96 106 116 126
57-TQQ
Chain M from PDB Type:PROTEIN Length:125
aligned with DHML_PARDE | P22619 from UniProtKB/Swiss-Prot Length:188
Alignment length:125
73 83 93 103 113 123 133 143 153 163 173 183
DHML_PARDE 64 TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATASWVASCYNPTDGQSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDIIWCFGAEDDAMTYHCTISPIVGKAS 188
SCOP domains d2j56m_ M: automated matches SCOP domains
CATH domains 2j56M00 M:7-131 Electron Transport Ethylamine Dehydrogenase CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...................hhhh..eee.hhhhh..........ee......eeeee....eeeee...eee........eee.........hhhhh........hhhhh..eeee...eeee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
2j56 M 7 TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATASwVASCYNPTDGQSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDIIWCFGAEDDAMTYHCTISPIVGKAS 131
16 26 36 46 56| 66 76 86 96 106 116 126
57-TQQ
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |