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(-) Description

Title :  CRYSTAL STRUCTURE OF E. COLI CLPP WITH A PEPTIDE CHLOROMETHYL KETONE COVALENTLY BOUND AT THE ACTIVE SITE
 
Authors :  A. Szyk, M. R. Maurizi
Date :  10 Feb 06  (Deposition) - 23 May 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N
Keywords :  Atp-Dependent Clpp Protease, Z-Leu-Tyr Chloromethyl Ketone Inhibitor, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Szyk, M. R. Maurizi
Crystal Structure At 1. 9A Of E. Coli Clpp With A Peptide Covalently Bound At The Active Site.
J. Struct. Biol. V. 156 165 2006
PubMed-ID: 16682229  |  Reference-DOI: 10.1016/J.JSB.2006.03.013

(-) Compounds

Molecule 1 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N
    EC Number: 3.4.21.92
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET3D
    Expression System Strain: BL21 DE3
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: CLPP, LOPP
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Strain: K12, MG1655
    Synonym: ENDOPEPTIDASE CLP, CASEINOLYTIC PROTEASE, PROTEASE TI, HEAT SHOCK PROTEIN F21.5

 Structural Features

(-) Chains, Units

  1234567891011121314
Asymmetric/Biological Unit : ABCDEFGHIJKLMN

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 40)

Asymmetric/Biological Unit (3, 40)
No.NameCountTypeFull Name
1CMQ14Ligand/IonN~2~-[(BENZYLOXY)CARBONYL]-N-[(1S,2S)-2-HYDROXY-1-(4-HYDROXYBENZYL)PROPYL]-L-LEUCINAMIDE
2GOL11Ligand/IonGLYCEROL
3PGE15Ligand/IonTRIETHYLENE GLYCOL

(-) Sites  (40, 40)

Asymmetric Unit (40, 40)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLY A:67 , GLY A:68 , VAL A:69 , ILE A:70 , SER A:97 , MET A:98 , HIS A:122 , PRO A:124 , LEU A:125 , MET A:149 , HOH A:4017 , HOH A:4052 , HOH A:4117 , HOH A:4143 , HOH A:4174 , GOL B:3002 , HOH B:4046BINDING SITE FOR RESIDUE CMQ A 501
02AC2SOFTWAREGLY B:67 , GLY B:68 , VAL B:69 , ILE B:70 , SER B:97 , MET B:98 , HIS B:122 , PRO B:124 , LEU B:125 , ILE B:142 , MET B:149 , HOH B:4017 , HOH B:4021 , HOH B:4129 , GOL C:3005 , HOH C:4091BINDING SITE FOR RESIDUE CMQ B 502
03AC3SOFTWAREGLY C:67 , GLY C:68 , VAL C:69 , ILE C:70 , SER C:97 , MET C:98 , HIS C:122 , PRO C:124 , LEU C:125 , ILE C:142 , MET C:149 , GOL C:3006 , HOH C:4009 , HOH C:4057 , HOH C:4128BINDING SITE FOR RESIDUE CMQ C 503
04AC4SOFTWAREGLY D:67 , GLY D:68 , VAL D:69 , ILE D:70 , SER D:97 , MET D:98 , HIS D:122 , PRO D:124 , LEU D:125 , MET D:149 , HOH D:4010 , HOH D:4020 , HOH D:4121 , HOH D:4140BINDING SITE FOR RESIDUE CMQ D 504
05AC5SOFTWAREGLY E:67 , GLY E:68 , VAL E:69 , ILE E:70 , SER E:97 , MET E:98 , HIS E:122 , PRO E:124 , LEU E:125 , ILE E:142 , MET E:149 , HOH E:4012 , HOH E:4018 , HOH E:4102 , HOH E:4152 , ARG F:118 , HOH F:4158BINDING SITE FOR RESIDUE CMQ E 505
06AC6SOFTWAREGLY F:67 , GLY F:68 , VAL F:69 , ILE F:70 , SER F:97 , MET F:98 , HIS F:122 , PRO F:124 , LEU F:125 , ILE F:142 , MET F:149 , HOH F:4032 , HOH F:4045 , HOH F:4077 , HOH F:4167 , GOL G:3009BINDING SITE FOR RESIDUE CMQ F 506
07AC7SOFTWAREARG A:118 , HOH A:4211 , GLY G:67 , GLY G:68 , VAL G:69 , ILE G:70 , SER G:97 , MET G:98 , HIS G:122 , PRO G:124 , LEU G:125 , ILE G:142 , MET G:149 , HOH G:4038 , HOH G:4043 , HOH G:4086 , HOH G:4090 , HOH G:4221BINDING SITE FOR RESIDUE CMQ G 507
08AC8SOFTWAREGLY H:67 , GLY H:68 , VAL H:69 , ILE H:70 , SER H:97 , MET H:98 , HIS H:122 , PRO H:124 , LEU H:125 , ILE H:142 , MET H:149 , HOH H:4021 , HOH H:4037 , HOH H:4076 , HOH H:4086 , GOL N:3007BINDING SITE FOR RESIDUE CMQ H 508
09AC9SOFTWAREGOL H:3008 , GLY I:67 , GLY I:68 , VAL I:69 , ILE I:70 , SER I:97 , MET I:98 , HIS I:122 , PRO I:124 , LEU I:125 , ILE I:142 , MET I:149 , ASN I:150 , HOH I:4016 , HOH I:4051 , HOH I:4126BINDING SITE FOR RESIDUE CMQ I 509
10BC1SOFTWAREHOH I:4063 , GLY J:67 , GLY J:68 , VAL J:69 , ILE J:70 , SER J:97 , MET J:98 , HIS J:122 , PRO J:124 , LEU J:125 , ILE J:142 , VAL J:145 , MET J:149 , HOH J:4063 , HOH J:4083 , HOH J:4099 , HOH J:4155 , HOH J:4159 , HOH J:4178 , HOH J:4180BINDING SITE FOR RESIDUE CMQ J 510
11BC2SOFTWAREHOH J:4045 , GLY K:67 , GLY K:68 , VAL K:69 , ILE K:70 , SER K:97 , MET K:98 , HIS K:122 , PRO K:124 , LEU K:125 , GLU K:141 , ILE K:142 , MET K:149 , HOH K:4021 , HOH K:4029 , HOH K:4053 , HOH K:4134BINDING SITE FOR RESIDUE CMQ K 511
12BC3SOFTWAREHOH E:4122 , GOL K:3010 , GLY L:67 , GLY L:68 , VAL L:69 , ILE L:70 , SER L:97 , MET L:98 , HIS L:122 , PRO L:124 , LEU L:125 , ILE L:142 , MET L:149 , HOH L:4015 , HOH L:4025 , HOH L:4079 , HOH L:4248BINDING SITE FOR RESIDUE CMQ L 512
13BC4SOFTWAREGOL L:3011 , GLY M:67 , GLY M:68 , VAL M:69 , ILE M:70 , SER M:97 , MET M:98 , HIS M:122 , PRO M:124 , LEU M:125 , ILE M:142 , MET M:149 , HOH M:4018 , HOH M:4034 , HOH M:4204BINDING SITE FOR RESIDUE CMQ M 513
14BC5SOFTWAREGLY N:67 , GLY N:68 , VAL N:69 , ILE N:70 , SER N:97 , MET N:98 , HIS N:122 , PRO N:124 , LEU N:125 , ILE N:142 , MET N:149 , HOH N:4017 , HOH N:4032 , HOH N:4092 , HOH N:4120 , HOH N:4122 , HOH N:4145BINDING SITE FOR RESIDUE CMQ N 514
15BC6SOFTWARETYR A:60 , TYR A:62 , ARG A:192 , HOH A:4061 , HOH A:4132 , HOH A:4217BINDING SITE FOR RESIDUE PGE A 4001
16BC7SOFTWAREGLU B:26 , TYR B:62 , ILE B:90 , ARG B:192 , ASN B:193 , HOH B:4187BINDING SITE FOR RESIDUE PGE B 4002
17BC8SOFTWARETYR C:62 , ARG C:192 , HOH C:4087BINDING SITE FOR RESIDUE PGE C 4003
18BC9SOFTWARETYR D:60 , TYR D:62 , PHE D:112 , LEU D:189 , ARG D:192 , HOH D:4123BINDING SITE FOR RESIDUE PGE D 4004
19CC1SOFTWARETYR E:60 , ARG E:192 , HOH E:4192BINDING SITE FOR RESIDUE PGE E 4005
20CC2SOFTWARETYR F:60 , TYR F:62 , ARG F:192 , HOH F:4103 , HOH F:4201BINDING SITE FOR RESIDUE PGE F 4006
21CC3SOFTWAREVAL G:28 , TYR G:60 , TYR G:62 , ARG G:192 , HOH G:4082 , HOH G:4104BINDING SITE FOR RESIDUE PGE G 4007
22CC4SOFTWARETYR H:60 , TYR H:62 , LEU H:189 , ARG H:192 , HOH H:4127 , HOH H:4165BINDING SITE FOR RESIDUE PGE H 4008
23CC5SOFTWARETYR I:60 , ILE I:90 , ARG I:192BINDING SITE FOR RESIDUE PGE I 4009
24CC6SOFTWARETYR J:62 , PHE J:112 , LEU J:189 , ARG J:192 , HOH J:4124 , HOH J:4171BINDING SITE FOR RESIDUE PGE J 4010
25CC7SOFTWARETYR K:62 , LEU K:189 , ARG K:192BINDING SITE FOR RESIDUE PGE K 4011
26CC8SOFTWARETYR L:62 , LEU L:189 , ARG L:192 , HOH L:4192BINDING SITE FOR RESIDUE PGE L 4012
27CC9SOFTWAREVAL M:28 , TYR M:62 , LEU M:189 , ARG M:192 , HOH M:4059 , HOH M:4210BINDING SITE FOR RESIDUE PGE M 4013
28DC1SOFTWAREVAL N:28 , TYR N:60 , TYR N:62 , ILE N:90 , PHE N:112 , LEU N:189 , ARG N:192 , HOH N:4132BINDING SITE FOR RESIDUE PGE N 4014
29DC2SOFTWARETHR K:157 , GLN K:159 , TYR K:182 , HOH K:4195 , HOH K:4201 , HOH N:4147BINDING SITE FOR RESIDUE PGE K 4015
30DC3SOFTWAREARG A:118 , LEU A:174 , SER A:175 , HOH A:4124 , HOH A:4125 , HOH A:4230 , GLU G:141 , ARG G:148BINDING SITE FOR RESIDUE GOL A 3001
31DC4SOFTWAREGLU A:141 , CMQ A:501 , GLN B:94 , ARG B:118 , PHE B:173BINDING SITE FOR RESIDUE GOL B 3002
32DC5SOFTWARETHR B:157 , GLN B:159 , GLU B:181BINDING SITE FOR RESIDUE GOL B 3003
33DC6SOFTWAREGLU E:141 , LYS E:144 , VAL E:145 , ARG F:118 , LEU F:174 , SER F:175 , HOH F:4028 , HOH F:4054 , HOH F:4191BINDING SITE FOR RESIDUE GOL F 3004
34DC7SOFTWAREGLU B:141 , CMQ B:502 , GLN C:94 , ARG C:118 , MET C:120 , PHE C:173 , HOH C:4091 , HOH C:4111BINDING SITE FOR RESIDUE GOL C 3005
35DC8SOFTWARETHR C:71 , GLU C:141 , CMQ C:503 , HOH C:4108 , GLN D:94 , ARG D:118 , PHE D:173 , HOH D:4147BINDING SITE FOR RESIDUE GOL C 3006
36DC9SOFTWARETHR H:71 , GLU H:141 , CMQ H:508 , GLN N:94 , ARG N:118 , PHE N:173BINDING SITE FOR RESIDUE GOL N 3007
37EC1SOFTWAREGLN H:94 , ARG H:118 , HOH H:4097 , HOH H:4135 , GLU I:141 , VAL I:145 , CMQ I:509BINDING SITE FOR RESIDUE GOL H 3008
38EC2SOFTWAREGLU F:141 , CMQ F:506 , GLN G:94 , ARG G:118 , PHE G:173 , HOH G:4054 , HOH G:4194BINDING SITE FOR RESIDUE GOL G 3009
39EC3SOFTWAREGLN K:94 , PHE K:173 , HOH K:4104 , GLU L:141 , CMQ L:512BINDING SITE FOR RESIDUE GOL K 3010
40EC4SOFTWAREGLN L:94 , PHE L:173 , HOH L:4202 , HOH L:4240 , GLU M:141 , CMQ M:513BINDING SITE FOR RESIDUE GOL L 3011

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2FZS)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2FZS)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2FZS)

(-) PROSITE Motifs  (2, 28)

Asymmetric/Biological Unit (2, 28)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CLP_PROTEASE_SERPS00381 Endopeptidase Clp serine active site.CLPP_ECOLI103-114
 
 
 
 
 
 
 
 
 
 
 
 
 		  14A:89-100
B:89-100
C:89-100
D:89-100
E:89-100
F:89-100
G:89-100
H:89-100
I:89-100
J:89-100
K:89-100
L:89-100
M:89-100
N:89-100
2CLP_PROTEASE_HISPS00382 Endopeptidase Clp histidine active site.CLPP_ECOLI125-138
 
 
 
 
 
 
 
 
 
 
 
 
 		  14A:111-124
B:111-124
C:111-124
D:111-124
E:111-124
F:111-124
G:111-124
H:111-124
I:111-124
J:111-124
K:111-124
L:111-124
M:111-124
N:111-124

(-) Exons   (0, 0)

(no "Exon" information available for 2FZS)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:186
 aligned with CLPP_ECOLI | P0A6G7 from UniProtKB/Swiss-Prot  Length:207

    Alignment length:192
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205  
           CLPP_ECOLI    16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207
               SCOP domains d2fzsa_       A: automated matches                                                                                                                                                               SCOP domains
               CATH domains 2fzsA00       A:2-193 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...ee..------..eehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..eeeehhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2fzs A   2 LVPMVIE------RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 193
                                  |  -   |    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191  
                                  8     15                                                                                                                                                                                  


Chain B from PDB  Type:PROTEIN  Length:192
 aligned with CLPP_ECOLI | P0A6G7 from UniProtKB/Swiss-Prot  Length:207

    Alignment length:192
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205  
           CLPP_ECOLI    16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207
               SCOP domains d2fzsb_ B: automated matches                                                                                                                                                                     SCOP domains
               CATH domains 2fzsB00 B:2-193 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeee......eeeehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..eeehhhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2fzs B   2 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 193
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191  


Chain C from PDB  Type:PROTEIN  Length:183
 aligned with CLPP_ECOLI | P0A6G7 from UniProtKB/Swiss-Prot  Length:207

    Alignment length:191
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206 
           CLPP_ECOLI    17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207
               SCOP domains d2fz        sc_ C: automated matches                                                                                                                                                            SCOP domains
               CATH domains 2fzs        C00 C:3-193 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....--------...hhhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fzs C   3 VPMV--------RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 193
                               |     -  |     22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192 
                               6       15                                                                                                                                                                                  


Chain D from PDB  Type:PROTEIN  Length:185
 aligned with CLPP_ECOLI | P0A6G7 from UniProtKB/Swiss-Prot  Length:207

    Alignment length:192
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205  
           CLPP_ECOLI    16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207
               SCOP domains d2fzsd_        D: automated matches                                                                                                                                                              SCOP domains
               CATH domains 2fzsD00        D:2-193 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......-------..hhhhhhhhh.eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..eeeehhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2fzs D   2 LVPMVIE-------SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 193
                                  |  -    |   21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191  
                                  8      16                                                                                                                                                                                 


Chain E from PDB  Type:PROTEIN  Length:188
 aligned with CLPP_ECOLI | P0A6G7 from UniProtKB/Swiss-Prot  Length:207

    Alignment length:192
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205  
           CLPP_ECOLI    16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207
               SCOP domains d2fzse_     E: automated matches                                                                                                                                                                 SCOP domains
               CATH domains 2fzsE00     E:2-193 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeee.----.eeeehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2fzs E   2 LVPMVIEQ----ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 193
                                   | -  |     21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191  
                                   9   14                                                                                                                                                                                   


Chain F from PDB  Type:PROTEIN  Length:185
 aligned with CLPP_ECOLI | P0A6G7 from UniProtKB/Swiss-Prot  Length:207

    Alignment length:192
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205  
           CLPP_ECOLI    16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207
               SCOP domains d2fzsf       _ F: automated matches                                                                                                                                                              SCOP domains
               CATH domains 2fzsF0       0 F:2-193 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...ee.-------..eehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2fzs F   2 LVPMVI-------RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 193
                                 |   -   |    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191  
                                 7      15                                                                                                                                                                                  


Chain G from PDB  Type:PROTEIN  Length:183
 aligned with CLPP_ECOLI | P0A6G7 from UniProtKB/Swiss-Prot  Length:207

    Alignment length:192
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205  
           CLPP_ECOLI    16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207
               SCOP domains d2fzs         g_ G: automated matches                                                                                                                                                            SCOP domains
               CATH domains 2fzsG         00 G:2-193 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....---------..hhhhhhhhh.eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..eeeehhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2fzs G   2 LVPMV---------SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 193
                                |    -    |   21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191  
                                6        16                                                                                                                                                                                 


Chain H from PDB  Type:PROTEIN  Length:183
 aligned with CLPP_ECOLI | P0A6G7 from UniProtKB/Swiss-Prot  Length:207

    Alignment length:192
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205  
           CLPP_ECOLI    16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207
               SCOP domains d2fzs         h_ H: automated matches                                                                                                                                                            SCOP domains
               CATH domains 2fzsH         00 H:2-193 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....---------..hhhhhhhhh.eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..eeeehhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2fzs H   2 LVPMV---------SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 193
                                |    -    |   21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191  
                                6        16                                                                                                                                                                                 


Chain I from PDB  Type:PROTEIN  Length:183
 aligned with CLPP_ECOLI | P0A6G7 from UniProtKB/Swiss-Prot  Length:207

    Alignment length:192
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205  
           CLPP_ECOLI    16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207
               SCOP domains d2fzs         i_ I: automated matches                                                                                                                                                            SCOP domains
               CATH domains 2fzsI         00 I:2-193 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....---------..hhhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..eeeehhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2fzs I   2 LVPMV---------SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 193
                                |    -    |   21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191  
                                6        16                                                                                                                                                                                 


Chain J from PDB  Type:PROTEIN  Length:185
 aligned with CLPP_ECOLI | P0A6G7 from UniProtKB/Swiss-Prot  Length:207

    Alignment length:192
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205  
           CLPP_ECOLI    16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207
               SCOP domains d2fzsj_        J: automated matches                                                                                                                                                              SCOP domains
               CATH domains 2fzsJ00        J:2-193 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...ee..-------.eehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..eeeehhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2fzs J   2 LVPMVIE-------SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 193
                                  |  -    |   21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191  
                                  8      16                                                                                                                                                                                 


Chain K from PDB  Type:PROTEIN  Length:186
 aligned with CLPP_ECOLI | P0A6G7 from UniProtKB/Swiss-Prot  Length:207

    Alignment length:192
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205  
           CLPP_ECOLI    16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207
               SCOP domains d2fzsk_       K: automated matches                                                                                                                                                               SCOP domains
               CATH domains 2fzsK00       K:2-193 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...ee..------..eehhhhhhhh.eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..eeeehhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2fzs K   2 LVPMVIE------RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 193
                                  |  -   |    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191  
                                  8     15                                                                                                                                                                                  


Chain L from PDB  Type:PROTEIN  Length:183
 aligned with CLPP_ECOLI | P0A6G7 from UniProtKB/Swiss-Prot  Length:207

    Alignment length:192
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205  
           CLPP_ECOLI    16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207
               SCOP domains d2fzs         l_ L: automated matches                                                                                                                                                            SCOP domains
               CATH domains 2fzsL         00 L:2-193 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....---------..hhhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..eeeehhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2fzs L   2 LVPMV---------SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 193
                                |    -    |   21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191  
                                6        16                                                                                                                                                                                 


Chain M from PDB  Type:PROTEIN  Length:186
 aligned with CLPP_ECOLI | P0A6G7 from UniProtKB/Swiss-Prot  Length:207

    Alignment length:193
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204   
           CLPP_ECOLI    15 ALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207
               SCOP domains d2fzsm_        M: automated matches                                                                                                                                                               SCOP domains
               CATH domains 2fzsM00        M:1-193 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee.-------..eehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fzs M   1 ALVPMVI-------RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 193
                                  |  -    |   20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190   
                                  7      15                                                                                                                                                                                  


Chain N from PDB  Type:PROTEIN  Length:183
 aligned with CLPP_ECOLI | P0A6G7 from UniProtKB/Swiss-Prot  Length:207

    Alignment length:192
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205  
           CLPP_ECOLI    16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207
               SCOP domains d2fzs         n_ N: automated matches                                                                                                                                                            SCOP domains
               CATH domains 2fzsN         00 N:2-193 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....---------..hhhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2fzs N   2 LVPMV---------SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 193
                                |    -    |   21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191  
                                6        16
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 14)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 14)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2FZS)

(-) Gene Ontology  (15, 15)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L,M,N   (CLPP_ECOLI | P0A6G7)
molecular function
    GO:0004176    ATP-dependent peptidase activity    Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the hydrolysis of peptide bonds.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0008233    peptidase activity    Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0004252    serine-type endopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
    GO:0008236    serine-type peptidase activity    Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
biological process
    GO:0006515    misfolded or incompletely synthesized protein catabolic process    The chemical reactions and pathways resulting in the breakdown of misfolded or attenuated proteins.
    GO:0010498    proteasomal protein catabolic process    The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds that is mediated by the proteasome.
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
    GO:0009408    response to heat    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
    GO:0009266    response to temperature stimulus    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2fzs)
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CLPP_ECOLI | P0A6G7: 1tyf 1yg6 1yg8 3hln 3mt6

(-) Related Entries Specified in the PDB File

1tg6 CRYSTALLOGRAPHY AND MUTAGENESIS POINT TO AN ESSENTIAL ROLE FOR THE N-TERMINUS OF HUMAN MITOCHONDRIAL CLPP
1tyf STRUCTURE OF CLPP AT 2.3 ANGSTROM RESOLUTION SUGGESTS A MODEL FOR ATP-DEPENDENT PROTEOLYSIS
1y7o THE STRUCTURE OF STREPTOCOCCUS PNEUMONIAE A153P CLPP
2cby CRYSTAL STRUCTURE OF THE ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1 (CLPP1) FROM MYCOBACTERIUM TUBERCULOSIS
2f6i CRYSTAL STRUCTURE OF THE CLPP PROTEASE CATALYTIC DOMAIN FROM PLASMODIUM FALCIPARUM