Chain A from PDB Type:PROTEIN Length:171
aligned with CLPP_STRR6 | P63788 from UniProtKB/Swiss-Prot Length:196
Alignment length:192
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191
CLPP_STRR6 2 IPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQETLEYGFIDEIMANN 193
SCOP domains d1y7oa 1 A:2-193 Clp protease, ClpP subunit SCOP domains
CATH domains 1y7oA0 0 A:2-193 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..ee..-------.eehhhhhhhh.eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eee.....--------------hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh....hhhhhhhhh...ee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H---------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1y7o A 2 IPVVIE-------SYDIYSRLLKDRIImLTGPVEDNmANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTmNFIKADVQTIVmGmAASmGTVIASSGAKGKRFmLPNAEYmIHQPm--------------APEHLLKTRNTLEKILAENSGQSmEKVHADAERDNWmSAQETLEYGFIDEImANN 193
| - | 21 |31 | 41 51 61 71 |81 91 | | 101 111| 121 | - 141 151 161| 171 | 181 191
7 15 29-MSE 38-MSE 79-MSE 91-MSE | 112-MSE | | 139 162-MSE 175-MSE 190-MSE
93-MSE 119-MSE|
97-MSE 124-MSE
Chain B from PDB Type:PROTEIN Length:178
aligned with CLPP_STRR6 | P63788 from UniProtKB/Swiss-Prot Length:196
Alignment length:194
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190
CLPP_STRR6 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQETLEYGFIDEIMANNS 194
SCOP domains d1y7ob_ B : Clp protease, ClpP subunit SCOP domains
CATH domains 1y7oB00 B :1-194 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee..---.eeeehhhhhhhh.eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eee.....-------------.hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh....hhhhhhhhh...ee..... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H----------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1y7o B 1 MIPVVIEQT---ERSYDIYSRLLKDRIImLTGPVEDNmANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTmNFIKADVQTIVmGmAASmGTVIASSGAKGKRFmLPNAEYmIHQPm-------------IAPEHLLKTRNTLEKILAENSGQSmEKVHADAERDNWmSAQETLEYGFIDEImANNS 194
|- | 20 30 |40 50 60 70 80 90| | |100 110 | 120 | - 140 150 160 | 170 | 180 190
9 13 29-MSE 38-MSE 79-MSE 91-MSE | 112-MSE | | 138 162-MSE 175-MSE 190-MSE
93-MSE 119-MSE|
97-MSE 124-MSE
Chain C from PDB Type:PROTEIN Length:176
aligned with CLPP_STRR6 | P63788 from UniProtKB/Swiss-Prot Length:196
Alignment length:195
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190
CLPP_STRR6 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQETLEYGFIDEIMANNSL 195
SCOP domains d1y7oc_ C: Clp protease, ClpP subunit SCOP domains
CATH domains 1y7oC00 C:1-195 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........-----...hhhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eee.....--------------hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh....eehhhhhhhh...ee...... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H------------------------------------------------------------------------ PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1y7o C 1 MIPVVIEQ-----RSYDIYSRLLKDRIImLTGPVEDNmANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTmNFIKADVQTIVmGmAASmGTVIASSGAKGKRFmLPNAEYmIHQPm--------------APEHLLKTRNTLEKILAENSGQSmEKVHADAERDNWmSAQETLEYGFIDEImANNSL 195
| - | 20 30 |40 50 60 70 80 90| | |100 110 | 120 | - 140 150 160 | 170 | 180 190
8 14 29-MSE 38-MSE 79-MSE 91-MSE | 112-MSE | | 139 162-MSE 175-MSE 190-MSE
93-MSE 119-MSE|
97-MSE 124-MSE
Chain D from PDB Type:PROTEIN Length:178
aligned with CLPP_STRR6 | P63788 from UniProtKB/Swiss-Prot Length:196
Alignment length:194
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190
CLPP_STRR6 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQETLEYGFIDEIMANNS 194
SCOP domains d1y7od_ D: Clp protease, ClpP subunit SCOP domains
CATH domains 1y7oD00 D: 1-194 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee...--.eeeehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eee.....--------------hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh.....hhhhhhhh....ee..... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H----------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1y7o D 1 MIPVVIEQTS--ERSYDIYSRLLKDRIImLTGPVEDNmANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTmNFIKADVQTIVmGmAASmGTVIASSGAKGKRFmLPNAEYmIHQPm--------------APEHLLKTRNTLEKILAENSGQSmEKVHADAERDNWmSAQETLEYGFIDEImANNS 194
10 | 20 30 |40 50 60 70 80 90| | |100 110 | 120 | - 140 150 160 | 170 | 180 190
10 13 29-MSE 38-MSE 79-MSE 91-MSE | 112-MSE | | 139 162-MSE 175-MSE 190-MSE
93-MSE 119-MSE|
97-MSE 124-MSE
Chain E from PDB Type:PROTEIN Length:174
aligned with CLPP_STRR6 | P63788 from UniProtKB/Swiss-Prot Length:196
Alignment length:194
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190
CLPP_STRR6 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQETLEYGFIDEIMANNS 194
SCOP domains d1y7oe_ E: Clp protease, ClpP subunit SCOP domains
CATH domains 1y7oE00 E:1-194 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...ee..------..eehhhhhhhh.eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eee.....--------------hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh.....hhhhhhhhh...ee..... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H----------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1y7o E 1 MIPVVIE------RSYDIYSRLLKDRIImLTGPVEDNmANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTmNFIKADVQTIVmGmAASmGTVIASSGAKGKRFmLPNAEYmIHQPm--------------APEHLLKTRNTLEKILAENSGQSmEKVHADAERDNWmSAQETLEYGFIDEImANNS 194
| - | 20 30 |40 50 60 70 80 90| | |100 110 | 120 | - 140 150 160 | 170 | 180 190
7 14 29-MSE 38-MSE 79-MSE 91-MSE | 112-MSE | | 139 162-MSE 175-MSE 190-MSE
93-MSE 119-MSE|
97-MSE 124-MSE
Chain F from PDB Type:PROTEIN Length:173
aligned with CLPP_STRR6 | P63788 from UniProtKB/Swiss-Prot Length:196
Alignment length:195
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190
CLPP_STRR6 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQETLEYGFIDEIMANNSL 195
SCOP domains d1y7of _ F: Clp protease, ClpP subunit SCOP domains
CATH domains 1y7oF0 0 F:1-195 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......--------..hhhhhhhhh.eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eee.....--------------hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh.....hhhhhhhhh...ee...... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H------------------------------------------------------------------------ PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1y7o F 1 MIPVVI--------SYDIYSRLLKDRIImLTGPVEDNmANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTmNFIKADVQTIVmGmAASmGTVIASSGAKGKRFmLPNAEYmIHQPm--------------APEHLLKTRNTLEKILAENSGQSmEKVHADAERDNWmSAQETLEYGFIDEImANNSL 195
| - | 20 30 |40 50 60 70 80 90| | |100 110 | 120 | - 140 150 160 | 170 | 180 190
6 15 29-MSE 38-MSE 79-MSE 91-MSE | 112-MSE | | 139 162-MSE 175-MSE 190-MSE
93-MSE 119-MSE|
97-MSE 124-MSE
Chain G from PDB Type:PROTEIN Length:177
aligned with CLPP_STRR6 | P63788 from UniProtKB/Swiss-Prot Length:196
Alignment length:193
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191
CLPP_STRR6 2 IPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQETLEYGFIDEIMANNS 194
SCOP domains d1y7og_ G: Clp protease, ClpP subunit SCOP domains
CATH domains 1y7oG00 G:2-194 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains (1) -------- CLP_protease-1y7oG01 G:13-193 - Pfam domains (1)
Pfam domains (2) -------- CLP_protease-1y7oG02 G:13-193 - Pfam domains (2)
Pfam domains (3) -------- CLP_protease-1y7oG03 G:13-193 - Pfam domains (3)
Pfam domains (4) -------- CLP_protease-1y7oG04 G:13-193 - Pfam domains (4)
Pfam domains (5) -------- CLP_protease-1y7oG05 G:13-193 - Pfam domains (5)
Pfam domains (6) -------- CLP_protease-1y7oG06 G:13-193 - Pfam domains (6)
Pfam domains (7) -------- CLP_protease-1y7oG07 G:13-193 - Pfam domains (7)
Sec.struct. author ..eeee..---.eeeehhhhhhhh.eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eee.....-------------.hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh......hhhhhhhhh...ee..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H----------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1y7o G 2 IPVVIEQT---ERSYDIYSRLLKDRIImLTGPVEDNmANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTmNFIKADVQTIVmGmAASmGTVIASSGAKGKRFmLPNAEYmIHQPm-------------IAPEHLLKTRNTLEKILAENSGQSmEKVHADAERDNWmSAQETLEYGFIDEImANNS 194
| - | 21 |31 | 41 51 61 71 |81 91 | | 101 111| 121 | - |141 151 161| 171 | 181 191
9 13 29-MSE 38-MSE 79-MSE 91-MSE | 112-MSE | | 138 162-MSE 175-MSE 190-MSE
93-MSE 119-MSE|
97-MSE 124-MSE
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |