Chain A from PDB Type:PROTEIN Length:210
aligned with Q8WSF8_APLCA | Q8WSF8 from UniProtKB/TrEMBL Length:236
Alignment length:213
22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222
Q8WSF8_APLCA 13 CVGQAHSQANLMRLKSDLFNRSPMYPGPTKDDPLTVTLGFTLQDIVKADSSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGATCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRERR 225
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhh.---.........eeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh.hhhhh....eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee...............eeeeeeeeeeeee........eeeeeeeeeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2byp A -4 DDDKLHSQANLMRLKSDLFNR---YPGPTKDDPLTVTLGFTLQDIVKADSSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGATCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRERR 208
5 15| | 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205
16 20
Chain B from PDB Type:PROTEIN Length:213
aligned with Q8WSF8_APLCA | Q8WSF8 from UniProtKB/TrEMBL Length:236
Alignment length:213
22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222
Q8WSF8_APLCA 13 CVGQAHSQANLMRLKSDLFNRSPMYPGPTKDDPLTVTLGFTLQDIVKADSSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGATCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRERR 225
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhh.............eeeeeeeeeeeeeeee....eeeeeeeeeeeeeeeeee.hhhhh....eeeee.hhh....eee.......ee....eeeee.eeeeee..eeeeeee...........eeeeeeeee.......eeee................eeeeeeeeeeeee........eeeeeeeeeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2byp B -4 DDDKLHSQANLMRLKSDLFNRSPMYPGPTKDDPLTVTLGFTLQDIVKADSSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGATCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRERR 208
5 15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205
Chain C from PDB Type:PROTEIN Length:211
aligned with Q8WSF8_APLCA | Q8WSF8 from UniProtKB/TrEMBL Length:236
Alignment length:211
24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224
Q8WSF8_APLCA 15 GQAHSQANLMRLKSDLFNRSPMYPGPTKDDPLTVTLGFTLQDIVKADSSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGATCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRERR 225
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhh.............eeeeeeeeeeeeeeee....eeeeeeeeeeeeeeeeee.hhhhhh...eeeee.hhh....eee.......ee....eeeee.eeeeee..eeeeeee...........eeeeeeeee.......eeeee...............eeeeeeeeeeeee........eeeeeeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2byp C -2 DKLHSQANLMRLKSDLFNRSPMYPGPTKDDPLTVTLGFTLQDIVKADSSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGATCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRERR 208
7 17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207
Chain D from PDB Type:PROTEIN Length:207
aligned with Q8WSF8_APLCA | Q8WSF8 from UniProtKB/TrEMBL Length:236
Alignment length:209
26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216
Q8WSF8_APLCA 17 AHSQANLMRLKSDLFNRSPMYPGPTKDDPLTVTLGFTLQDIVKADSSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGATCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRERR 225
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhh--..........eeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh.hhhhh....eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeee................eeeeeeeeeeeee........eeeeeeeeeeee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2byp D 0 LHSQANLMRLKSDLFNR--MYPGPTKDDPLTVTLGFTLQDIVKADSSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGATCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRERR 208
9 | 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199
16 19
Chain E from PDB Type:PROTEIN Length:212
aligned with Q8WSF8_APLCA | Q8WSF8 from UniProtKB/TrEMBL Length:236
Alignment length:214
21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221
Q8WSF8_APLCA 12 ACVGQAHSQANLMRLKSDLFNRSPMYPGPTKDDPLTVTLGFTLQDIVKADSSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGATCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRERR 225
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhhhhh..--.........eeeeeeeeeeeeeeee....eeeeeeeeeeeeeeeeee.hhhhhh...eeeee.hhh....eee.......ee....eeeee.eeeeee..eeeeeee...........eeeeeeeee.......eeee................eeeeeeeeeeeee........eeeeeeeeeeee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2byp E -5 DDDDKLHSQANLMRLKSDLFNRS--YPGPTKDDPLTVTLGFTLQDIVKADSSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGATCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRERR 208
4 14 | | 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204
17 20
Chain F from PDB Type:PROTEIN Length:12
aligned with CA1_CONIM | P50983 from UniProtKB/Swiss-Prot Length:17
Alignment length:12
14
CA1_CONIM 5 GCCSDPRCAWRC 16
SCOP domains ------------ SCOP domains
CATH domains ------------ CATH domains
Pfam domains ------------ Pfam domains
Sec.struct. author hhhhh....... Sec.struct. author
SAPs(SNPs) ------------ SAPs(SNPs)
PROSITE -ALPHA_CONOT PROSITE
Transcript ------------ Transcript
2byp F 401 GCCSDPRCAWRc 412
410 |
412-CY3
Chain G from PDB Type:PROTEIN Length:12
aligned with CA1_CONIM | P50983 from UniProtKB/Swiss-Prot Length:17
Alignment length:12
14
CA1_CONIM 5 GCCSDPRCAWRC 16
SCOP domains ------------ SCOP domains
CATH domains ------------ CATH domains
Pfam domains ------------ Pfam domains
Sec.struct. author hhhhh....... Sec.struct. author
SAPs(SNPs) ------------ SAPs(SNPs)
PROSITE -ALPHA_CONOT PROSITE
Transcript ------------ Transcript
2byp G 401 GCCSDPRCAWRc 412
410 |
412-CY3
Chain H from PDB Type:PROTEIN Length:12
aligned with CA1_CONIM | P50983 from UniProtKB/Swiss-Prot Length:17
Alignment length:12
14
CA1_CONIM 5 GCCSDPRCAWRC 16
SCOP domains ------------ SCOP domains
CATH domains ------------ CATH domains
Pfam domains ------------ Pfam domains
Sec.struct. author hhhhh....... Sec.struct. author
SAPs(SNPs) ------------ SAPs(SNPs)
PROSITE -ALPHA_CONOT PROSITE
Transcript ------------ Transcript
2byp H 401 GCCSDPRCAWRc 412
410 |
412-CY3
Chain I from PDB Type:PROTEIN Length:12
aligned with CA1_CONIM | P50983 from UniProtKB/Swiss-Prot Length:17
Alignment length:12
14
CA1_CONIM 5 GCCSDPRCAWRC 16
SCOP domains ------------ SCOP domains
CATH domains ------------ CATH domains
Pfam domains ------------ Pfam domains
Sec.struct. author hhhhh....... Sec.struct. author
SAPs(SNPs) ------------ SAPs(SNPs)
PROSITE -ALPHA_CONOT PROSITE
Transcript ------------ Transcript
2byp I 401 GCCSDPRCAWRc 412
410 |
412-CY3
Chain J from PDB Type:PROTEIN Length:12
aligned with CA1_CONIM | P50983 from UniProtKB/Swiss-Prot Length:17
Alignment length:12
14
CA1_CONIM 5 GCCSDPRCAWRC 16
SCOP domains ------------ SCOP domains
CATH domains ------------ CATH domains
Pfam domains ------------ Pfam domains
Sec.struct. author hhhhh....... Sec.struct. author
SAPs(SNPs) ------------ SAPs(SNPs)
PROSITE -ALPHA_CONOT PROSITE
Transcript ------------ Transcript
2byp J 401 GCCSDPRCAWRc 412
410 |
412-CY3
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |