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(-) Description

Title :  CRYSTAL STRUCTURE OF RED KIDNEY BEAN PURPLE ACID PHOSPHATASE IN COMPLEX WITH FLUORIDE
 
Authors :  L. W. Guddat, G. S. Schenk, L. R. Gahan, T. W. Elliot, E. Leung
Date :  27 Jun 07  (Deposition) - 14 Oct 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Binuclear, Fe-Zn, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. Schenk, T. W. Elliott, E. Leung, L. E. Carrington, N. Mitic, L. R. Gahan, L. W. Guddat
Crystal Structures Of A Purple Acid Phosphatase, Representing Different Steps Of This Enzyme'S Catalytic Cycle.
Bmc Struct. Biol. V. 8 6 2008
PubMed-ID: 18234116  |  Reference-DOI: 10.1186/1472-6807-8-6

(-) Compounds

Molecule 1 - PURPLE ACID PHOSPHATASE
    Chains: A, B, C, D
    EC Number: 3.1.3.2
    Organism Common: KIDNEY BEAN
    Organism Scientific: PHASEOLUS VULGARIS
    Organism Taxid: 3885

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (7, 47)

Asymmetric Unit (7, 47)
No.NameCountTypeFull Name
1F4Ligand/IonFLUORIDE ION
2FE4Ligand/IonFE (III) ION
3NA11Ligand/IonSODIUM ION
4NAG13Ligand/IonN-ACETYL-D-GLUCOSAMINE
5NDG3Ligand/Ion2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
6SO48Ligand/IonSULFATE ION
7ZN4Ligand/IonZINC ION
Biological Unit 1 (3, 12)
No.NameCountTypeFull Name
1F-1Ligand/IonFLUORIDE ION
2FE-1Ligand/IonFE (III) ION
3NA-1Ligand/IonSODIUM ION
4NAG6Ligand/IonN-ACETYL-D-GLUCOSAMINE
5NDG2Ligand/Ion2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
6SO44Ligand/IonSULFATE ION
7ZN-1Ligand/IonZINC ION
Biological Unit 2 (3, 12)
No.NameCountTypeFull Name
1F-1Ligand/IonFLUORIDE ION
2FE-1Ligand/IonFE (III) ION
3NA-1Ligand/IonSODIUM ION
4NAG7Ligand/IonN-ACETYL-D-GLUCOSAMINE
5NDG1Ligand/Ion2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
6SO44Ligand/IonSULFATE ION
7ZN-1Ligand/IonZINC ION

(-) Sites  (47, 47)

Asymmetric Unit (47, 47)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASN A:81 , TYR D:24BINDING SITE FOR RESIDUE NAG A 437
02AC2SOFTWAREASP A:16 , VAL A:17 , ASN A:143 , SER A:147BINDING SITE FOR RESIDUE NAG A 438
03AC3SOFTWARELYS A:395 , ASN A:396 , THR A:398 , TRP A:419BINDING SITE FOR RESIDUE NAG A 439
04AC4SOFTWAREARG A:108 , ASN A:109BINDING SITE FOR RESIDUE NAG A 440
05AC5SOFTWAREASN B:81 , ASN B:173 , TYR C:24BINDING SITE FOR RESIDUE NAG B 437
06AC6SOFTWAREASP B:16 , PHE B:140 , ASN B:143 , SER B:147 , ARG B:188BINDING SITE FOR RESIDUE NDG B 438
07AC7SOFTWAREASN B:396 , THR B:398 , HIS B:399BINDING SITE FOR RESIDUE NDG B 439
08AC8SOFTWAREGLU B:51 , ARG B:108 , ASN B:109BINDING SITE FOR RESIDUE NAG B 440
09AC9SOFTWARETYR B:24 , ASP B:50 , ASN C:81BINDING SITE FOR RESIDUE NAG C 437
10BC1SOFTWAREMET C:11 , ASP C:16 , PHE C:140 , ASN C:143 , SER C:147 , GLU C:150 , ARG C:188BINDING SITE FOR RESIDUE NAG C 438
11BC2SOFTWAREASN C:396 , HIS C:399 , TRP C:419BINDING SITE FOR RESIDUE NDG C 439
12BC3SOFTWAREGLU C:51 , ARG C:108 , ASN C:109BINDING SITE FOR RESIDUE NAG C 440
13BC4SOFTWARETYR A:24 , ASN D:81 , ASN D:173BINDING SITE FOR RESIDUE NAG D 437
14BC5SOFTWAREASP D:16 , PHE D:140 , ASN D:143 , SER D:147BINDING SITE FOR RESIDUE NAG D 438
15BC6SOFTWARELYS D:395 , ASN D:396BINDING SITE FOR RESIDUE NAG D 439
16BC7SOFTWAREARG D:108 , ASN D:109BINDING SITE FOR RESIDUE NAG D 440
17BC8SOFTWAREASP A:135 , ASP A:164 , TYR A:167 , HIS A:325 , ZN A:434 , F A:436BINDING SITE FOR RESIDUE FE A 433
18BC9SOFTWAREASP A:135 , ASP A:164 , ASN A:201 , HIS A:286 , HIS A:323 , FE A:433 , F A:436BINDING SITE FOR RESIDUE ZN A 434
19CC1SOFTWAREHIS A:202 , HIS A:325 , TYR A:365 , F A:436 , NA A:442 , NA A:444 , HOH A:594 , SO4 B:441BINDING SITE FOR RESIDUE SO4 A 435
20CC2SOFTWAREASP A:164 , ASN A:201 , HIS A:323 , FE A:433 , ZN A:434 , SO4 A:435 , NA A:442 , HOH A:594BINDING SITE FOR RESIDUE F A 436
21CC3SOFTWAREHIS A:296 , SO4 A:435 , NA A:442 , NA A:443 , NA A:444 , ARG B:258 , HOH B:473BINDING SITE FOR RESIDUE SO4 B 441
22CC4SOFTWAREASN A:201 , HIS A:202 , HIS A:296 , SO4 A:435 , F A:436 , HOH A:594 , SO4 B:441BINDING SITE FOR RESIDUE NA A 442
23CC5SOFTWAREHIS A:295 , NA A:444 , ARG B:258 , SO4 B:441BINDING SITE FOR RESIDUE NA A 443
24CC6SOFTWAREHIS A:295 , SO4 A:435 , NA A:443 , SO4 B:441BINDING SITE FOR RESIDUE NA A 444
25CC7SOFTWAREASP B:135 , ASP B:164 , TYR B:167 , HIS B:325 , ZN B:434 , F B:436BINDING SITE FOR RESIDUE FE B 433
26CC8SOFTWAREASP B:135 , ASP B:164 , ASN B:201 , HIS B:286 , HIS B:323 , FE B:433 , F B:436BINDING SITE FOR RESIDUE ZN B 434
27CC9SOFTWARESO4 A:441 , HIS B:202 , HIS B:325 , TYR B:365 , F B:436 , NA B:442 , NA B:444BINDING SITE FOR RESIDUE SO4 B 435
28DC1SOFTWAREASP B:135 , ASP B:164 , ASN B:201 , HIS B:323 , HIS B:325 , FE B:433 , ZN B:434 , SO4 B:435 , NA B:442BINDING SITE FOR RESIDUE F B 436
29DC2SOFTWAREARG A:258 , HIS B:296 , SO4 B:435 , NA B:442 , NA B:443 , NA B:444BINDING SITE FOR RESIDUE SO4 A 441
30DC3SOFTWARESO4 A:441 , ASN B:201 , HIS B:296 , SO4 B:435 , F B:436BINDING SITE FOR RESIDUE NA B 442
31DC4SOFTWARESO4 A:441 , HIS B:295 , NA B:444BINDING SITE FOR RESIDUE NA B 443
32DC5SOFTWARESO4 A:441 , HIS B:295 , SO4 B:435 , NA B:443BINDING SITE FOR RESIDUE NA B 444
33DC6SOFTWAREASP C:135 , ASP C:164 , TYR C:167 , HIS C:325 , ZN C:434 , SO4 C:435 , F C:436BINDING SITE FOR RESIDUE FE C 433
34DC7SOFTWAREASP C:164 , ASN C:201 , HIS C:286 , HIS C:323 , FE C:433 , F C:436BINDING SITE FOR RESIDUE ZN C 434
35DC8SOFTWAREHIS C:202 , HIS C:295 , HIS C:325 , TYR C:365 , FE C:433 , F C:436 , NA C:443 , NA C:444 , SO4 D:441BINDING SITE FOR RESIDUE SO4 C 435
36DC9SOFTWAREASP C:164 , ASN C:201 , HIS C:202 , HIS C:286 , HIS C:323 , FE C:433 , ZN C:434 , SO4 C:435 , NA C:443BINDING SITE FOR RESIDUE F C 436
37EC1SOFTWAREHIS C:296 , SO4 C:435 , NA C:442 , NA C:444 , ARG D:258 , HOH D:564BINDING SITE FOR RESIDUE SO4 D 441
38EC2SOFTWAREHIS C:295 , NA C:444 , SO4 D:441BINDING SITE FOR RESIDUE NA C 442
39EC3SOFTWAREASN C:201 , HIS C:296 , SO4 C:435 , F C:436BINDING SITE FOR RESIDUE NA C 443
40EC4SOFTWAREHIS C:295 , SO4 C:435 , NA C:442 , SO4 D:441BINDING SITE FOR RESIDUE NA C 444
41EC5SOFTWAREASP D:135 , ASP D:164 , TYR D:167 , HIS D:325 , ZN D:434 , F D:436BINDING SITE FOR RESIDUE FE D 433
42EC6SOFTWAREASP D:135 , ASP D:164 , ASN D:201 , HIS D:286 , HIS D:323 , FE D:433 , F D:436BINDING SITE FOR RESIDUE ZN D 434
43EC7SOFTWARESO4 C:441 , HIS D:202 , HIS D:295 , HIS D:325 , TYR D:365 , F D:436 , NA D:443BINDING SITE FOR RESIDUE SO4 D 435
44EC8SOFTWAREASP D:164 , ASN D:201 , HIS D:323 , FE D:433 , ZN D:434 , SO4 D:435 , NA D:443BINDING SITE FOR RESIDUE F D 436
45EC9SOFTWAREARG C:258 , HOH C:549 , HIS D:296 , SO4 D:435 , NA D:442 , NA D:443BINDING SITE FOR RESIDUE SO4 C 441
46FC1SOFTWARESO4 C:441 , HIS D:295BINDING SITE FOR RESIDUE NA D 442
47FC2SOFTWARESO4 C:441 , ASN D:201 , HIS D:296 , SO4 D:435 , F D:436BINDING SITE FOR RESIDUE NA D 443

(-) SS Bonds  (2, 2)

Asymmetric Unit
No.Residues
1A:345 -B:345
2C:345 -D:345

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Gln A:374 -Pro A:375
2Gln B:374 -Pro B:375
3Gln C:374 -Pro C:375
4Gln D:374 -Pro D:375

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2QFP)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2QFP)

(-) Exons   (0, 0)

(no "Exon" information available for 2QFP)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:424
 aligned with PPAF_PHAVU | P80366 from UniProtKB/Swiss-Prot  Length:459

    Alignment length:424
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455    
           PPAF_PHAVU    36 RDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDDST 459
               SCOP domains d2qfpa1 A:9-120 automated matches                                                                               d2qfpa2 A:121-432 automated matches                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains -----------------2qfpA01 A:26-122 Purple acid phosphatase, domain1                                                2qfpA02 A:123-432  [code=3.60.21.10, no name defined]                                                                                                                                                                                                                                                                  CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhh........eeeeeee.......eeeeeee........eeeee......eee..eee..........eeeeeee.......eeeeee......eeeeee..........eeeeee.....hhhhhhhhhhhhh......eeee.....hhhhhhhhhhhhhhhhhhhhhhhhh...eee..hhhhhh.hhhhh....hhhhhhhh..hhhhhh......eeeee..eeeee..........hhhhhhhhhhhhhh......eeeee...............hhhhhhhhhhhhhhh...eeee.....eeee..ee.............ee.....eeeee....................eeeee...eeeeeee....eeeeeeee.........eeeeee........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qfp A   9 RDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDDST 432
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428    


Chain B from PDB  Type:PROTEIN  Length:424
 aligned with PPAF_PHAVU | P80366 from UniProtKB/Swiss-Prot  Length:459

    Alignment length:424
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455    
           PPAF_PHAVU    36 RDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDDST 459
               SCOP domains d2qfpb1 B:9-120 automated matches                                                                               d2qfpb2 B:121-432 automated matches                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains -----------------2qfpB01 B:26-122 Purple acid phosphatase, domain1                                                2qfpB02 B:123-432  [code=3.60.21.10, no name defined]                                                                                                                                                                                                                                                                  CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhh........eeeeeee.......eeeeeee........eeeee......eee..eee..........eeeeeee.......eeeeee......eeeeee..........eeeeee.....hhhhhhhhhhhhhh.....eeee.....hhhhhhhhhhhhhhhhhhhhhhhhh...eee..hhhhhh.hhhhh....hhhhhhhh..hhhhhh......eeeee..eeeee..........hhhhhhhhhhhhhh......eeeee...............hhhhhhhhhhhhhhh...eeee.....eeee..ee.............ee.....eeeee....................eeeee...eeeeeee....eeeeeeee.........eeeeee........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qfp B   9 RDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDDST 432
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428    


Chain C from PDB  Type:PROTEIN  Length:424
 aligned with PPAF_PHAVU | P80366 from UniProtKB/Swiss-Prot  Length:459

    Alignment length:424
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455    
           PPAF_PHAVU    36 RDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDDST 459
               SCOP domains d2qfpc1 C:9-120 automated matches                                                                               d2qfpc2 C:121-432 automated matches                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains -----------------2qfpC01 C:26-122 Purple acid phosphatase, domain1                                                2qfpC02 C:123-432  [code=3.60.21.10, no name defined]                                                                                                                                                                                                                                                                  CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhh........eeeeeee.......eeeeeee........eeeee......eee..eee..........eeeeeee.......eeeeee......eeeeee..........eeeeee.....hhhhhhhhhhhhh......eeee.....hhhhhhhhhhhhhhhhhhhhhhhhh...ee...hhhhhh.hhhhh....hhhhhhhh..hhhhhh......eeeee..eeeee..........hhhhhhhhhhhhh.......eeeee...............hhhhhhhhhhhhhhh...eeee.....eeee..ee.............ee.....eeeee....................eeeee...eeeeeee....eeeeeeee.........eeeeee........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qfp C   9 RDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDDST 432
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428    


Chain D from PDB  Type:PROTEIN  Length:424
 aligned with PPAF_PHAVU | P80366 from UniProtKB/Swiss-Prot  Length:459

    Alignment length:424
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455    
           PPAF_PHAVU    36 RDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDDST 459
               SCOP domains d2qfpd1 D:9-120 automated matches                                                                               d2qfpd2 D:121-432 automated matches                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains -----------------2qfpD01 D:26-122 Purple acid phosphatase, domain1                                                2qfpD02 D:123-432  [code=3.60.21.10, no name defined]                                                                                                                                                                                                                                                                  CATH domains
           Pfam domains (1) --------------------------------------------------------------------------------------------Metallophos-2qfpD01 D:101-300                                                                                                                                                                           ------------------------Metallophos_C-2qfpD05 D:325-391                                    ----------------------------------------- Pfam domains (1)
           Pfam domains (2) --------------------------------------------------------------------------------------------Metallophos-2qfpD02 D:101-300                                                                                                                                                                           ------------------------Metallophos_C-2qfpD06 D:325-391                                    ----------------------------------------- Pfam domains (2)
           Pfam domains (3) --------------------------------------------------------------------------------------------Metallophos-2qfpD03 D:101-300                                                                                                                                                                           ------------------------Metallophos_C-2qfpD07 D:325-391                                    ----------------------------------------- Pfam domains (3)
           Pfam domains (4) --------------------------------------------------------------------------------------------Metallophos-2qfpD04 D:101-300                                                                                                                                                                           ------------------------Metallophos_C-2qfpD08 D:325-391                                    ----------------------------------------- Pfam domains (4)
         Sec.struct. author ......hhhhh........eeeeeee.......eeeeeee........eeeee......eee..eee..........eeeeeee.......eeeeee......eeeeee..........eeeeee.....hhhhhhhhhhhhhh.....eeee.....hhhhhhhhhhhhhhhhhhhhhhhhh...ee...hhhhhh.hhhhh....hhhhhhhh..hhhhhh......eeeee..eeeee..........hhhhhhhhhhhhhh......eeeee...............hhhhhhhhhhhhhhh...eeee.....eeee..ee.............ee.....eeeee....................eeeee...eeeeeee....eeeeeeee.......eeeeeeee........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qfp D   9 RDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDDST 432
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428
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 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (2, 8)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (2, 8)

Asymmetric Unit
(-)
Clan: Calcineurin (56)
(-)
Clan: no clan defined [family: Metallophos_C] (5)

(-) Gene Ontology  (7, 7)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (PPAF_PHAVU | P80366)
molecular function
    GO:0003993    acid phosphatase activity    Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum.
    GO:0008199    ferric iron binding    Interacting selectively and non-covalently with ferric iron, Fe(III).
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0016311    dephosphorylation    The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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  2qfp
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  PPAF_PHAVU | P80366
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PPAF_PHAVU | P80366: 1kbp 2qfr 3kbp 4dhl 4dsy 4dt2 4kbp 4kkz

(-) Related Entries Specified in the PDB File

2qfr
3kbp RKBPAP FREE ENZYME
4kbp RKBPAP IN COMPLEX WITH PHOSPHATE