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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF RED KIDNEY BEAN PURPLE ACID PHOSPHATASE COMPLEX WITH FLUORIDE
Keywords BINUCLEAR, FE-ZN, HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2QFP     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PURPLE ACID PHOSPHATASE  A 424 3487 0
2  Protein   PURPLE ACID PHOSPHATASE  B 424 3487 0
3  Protein   PURPLE ACID PHOSPHATASE  C 424 3487 0
4  Protein   PURPLE ACID PHOSPHATASE  D 424 3487 0
5  Ligand   PURPLE ACID PHOSPHATASE  A 12 0 72
6  Ligand   PURPLE ACID PHOSPHATASE  B 12 0 72
7  Ligand   PURPLE ACID PHOSPHATASE  C 12 0 72
8  Ligand   PURPLE ACID PHOSPHATASE  D 11 0 71
9 Water     547 0 547
total       2290 13948 834
Proteins
Unit 1 ARG9 ASP10 MET11 PRO12 LEU13 ASP14 SER15 ASP16 VAL17 PHE18 ARG19 VAL20 PRO21 PRO22 GLY23 TYR24 ASN25 ALA26 PRO27 GLN28 GLN29 VAL30 HIS31 ILE32 THR33 GLN34 GLY35 ASP36 LEU37 VAL38 GLY39 ARG40 ALA41 MET42 ILE43 ILE44 SER45 TRP46 VAL47 THR48 MET49 ASP50 GLU51 PRO52 GLY53 SER54 SER55 ALA56 VAL57 ARG58 TYR59 TRP60 SER61 GLU62 LYS63 ASN64 GLY65 ARG66 LYS67 ARG68 ILE69 ALA70 LYS71 GLY72 LYS73 MET74 SER75 THR76 TYR77 ARG78 PHE79 PHE80 ASN81 TYR82 SER83 SER84 GLY85 PHE86 ILE87 HIS88 HIS89 THR90 THR91 ILE92 ARG93 LYS94 LEU95 LYS96 TYR97 ASN98 THR99 LYS100 TYR101 TYR102 TYR103 GLU104 VAL105 GLY106 LEU107 ARG108 ASN109 THR110 THR111 ARG112 ARG113 PHE114 SER115 PHE116 ILE117 THR118 PRO119 PRO120 GLN121 THR122 GLY123 LEU124 ASP125 VAL126 PRO127 TYR128 THR129 PHE130 GLY131 LEU132 ILE133 GLY134 ASP135 LEU136 GLY137 GLN138 SER139 PHE140 ASP141 SER142 ASN143 THR144 THR145 LEU146 SER147 HIS148 TYR149 GLU150 LEU151 SER152 PRO153 LYS154 LYS155 GLY156 GLN157 THR158 VAL159 LEU160 PHE161 VAL162 GLY163 ASP164 LEU165 SER166 TYR167 ALA168 ASP169 ARG170 TYR171 PRO172 ASN173 HIS174 ASP175 ASN176 VAL177 ARG178 TRP179 ASP180 THR181 TRP182 GLY183 ARG184 PHE185 THR186 GLU187 ARG188 SER189 VAL190 ALA191 TYR192 GLN193 PRO194 TRP195 ILE196 TRP197 THR198 ALA199 GLY200 ASN201 HIS202 GLU203 ILE204 GLU205 PHE206 ALA207 PRO208 GLU209 ILE210 ASN211 GLU212 THR213 GLU214 PRO215 PHE216 LYS217 PRO218 PHE219 SER220 TYR221 ARG222 TYR223 HIS224 VAL225 PRO226 TYR227 GLU228 ALA229 SER230 GLN231 SER232 THR233 SER234 PRO235 PHE236 TRP237 TYR238 SER239 ILE240 LYS241 ARG242 ALA243 SER244 ALA245 HIS246 ILE247 ILE248 VAL249 LEU250 SER251 SER252 TYR253 SER254 ALA255 TYR256 GLY257 ARG258 GLY259 THR260 PRO261 GLN262 TYR263 THR264 TRP265 LEU266 LYS267 LYS268 GLU269 LEU270 ARG271 LYS272 VAL273 LYS274 ARG275 SER276 GLU277 THR278 PRO279 TRP280 LEU281 ILE282 VAL283 LEU284 MET285 HIS286 SER287 PRO288 LEU289 TYR290 ASN291 SER292 TYR293 ASN294 HIS295 HIS296 PHE297 MET298 GLU299 GLY300 GLU301 ALA302 MET303 ARG304 THR305 LYS306 PHE307 GLU308 ALA309 TRP310 PHE311 VAL312 LYS313 TYR314 LYS315 VAL316 ASP317 VAL318 VAL319 PHE320 ALA321 GLY322 HIS323 VAL324 HIS325 ALA326 TYR327 GLU328 ARG329 SER330 GLU331 ARG332 VAL333 SER334 ASN335 ILE336 ALA337 TYR338 LYS339 ILE340 THR341 ASN342 GLY343 LEU344 CYS345 THR346 PRO347 VAL348 LYS349 ASP350 GLN351 SER352 ALA353 PRO354 VAL355 TYR356 ILE357 THR358 ILE359 GLY360 ASP361 ALA362 GLY363 ASN364 TYR365 GLY366 VAL367 ILE368 ASP369 SER370 ASN371 MET372 ILE373 GLN374 PRO375 GLN376 PRO377 GLU378 TYR379 SER380 ALA381 PHE382 ARG383 GLU384 ALA385 SER386 PHE387 GLY388 HIS389 GLY390 MET391 PHE392 ASP393 ILE394 LYS395 ASN396 ARG397 THR398 HIS399 ALA400 HIS401 PHE402 SER403 TRP404 ASN405 ARG406 ASN407 GLN408 ASP409 GLY410 VAL411 ALA412 VAL413 GLU414 ALA415 ASP416 SER417 VAL418 TRP419 PHE420 PHE421 ASN422 ARG423 HIS424 TRP425 TYR426 PRO427 VAL428 ASP429 ASP430 SER431 THR432
Unit 2 ARG9 ASP10 MET11 PRO12 LEU13 ASP14 SER15 ASP16 VAL17 PHE18 ARG19 VAL20 PRO21 PRO22 GLY23 TYR24 ASN25 ALA26 PRO27 GLN28 GLN29 VAL30 HIS31 ILE32 THR33 GLN34 GLY35 ASP36 LEU37 VAL38 GLY39 ARG40 ALA41 MET42 ILE43 ILE44 SER45 TRP46 VAL47 THR48 MET49 ASP50 GLU51 PRO52 GLY53 SER54 SER55 ALA56 VAL57 ARG58 TYR59 TRP60 SER61 GLU62 LYS63 ASN64 GLY65 ARG66 LYS67 ARG68 ILE69 ALA70 LYS71 GLY72 LYS73 MET74 SER75 THR76 TYR77 ARG78 PHE79 PHE80 ASN81 TYR82 SER83 SER84 GLY85 PHE86 ILE87 HIS88 HIS89 THR90 THR91 ILE92 ARG93 LYS94 LEU95 LYS96 TYR97 ASN98 THR99 LYS100 TYR101 TYR102 TYR103 GLU104 VAL105 GLY106 LEU107 ARG108 ASN109 THR110 THR111 ARG112 ARG113 PHE114 SER115 PHE116 ILE117 THR118 PRO119 PRO120 GLN121 THR122 GLY123 LEU124 ASP125 VAL126 PRO127 TYR128 THR129 PHE130 GLY131 LEU132 ILE133 GLY134 ASP135 LEU136 GLY137 GLN138 SER139 PHE140 ASP141 SER142 ASN143 THR144 THR145 LEU146 SER147 HIS148 TYR149 GLU150 LEU151 SER152 PRO153 LYS154 LYS155 GLY156 GLN157 THR158 VAL159 LEU160 PHE161 VAL162 GLY163 ASP164 LEU165 SER166 TYR167 ALA168 ASP169 ARG170 TYR171 PRO172 ASN173 HIS174 ASP175 ASN176 VAL177 ARG178 TRP179 ASP180 THR181 TRP182 GLY183 ARG184 PHE185 THR186 GLU187 ARG188 SER189 VAL190 ALA191 TYR192 GLN193 PRO194 TRP195 ILE196 TRP197 THR198 ALA199 GLY200 ASN201 HIS202 GLU203 ILE204 GLU205 PHE206 ALA207 PRO208 GLU209 ILE210 ASN211 GLU212 THR213 GLU214 PRO215 PHE216 LYS217 PRO218 PHE219 SER220 TYR221 ARG222 TYR223 HIS224 VAL225 PRO226 TYR227 GLU228 ALA229 SER230 GLN231 SER232 THR233 SER234 PRO235 PHE236 TRP237 TYR238 SER239 ILE240 LYS241 ARG242 ALA243 SER244 ALA245 HIS246 ILE247 ILE248 VAL249 LEU250 SER251 SER252 TYR253 SER254 ALA255 TYR256 GLY257 ARG258 GLY259 THR260 PRO261 GLN262 TYR263 THR264 TRP265 LEU266 LYS267 LYS268 GLU269 LEU270 ARG271 LYS272 VAL273 LYS274 ARG275 SER276 GLU277 THR278 PRO279 TRP280 LEU281 ILE282 VAL283 LEU284 MET285 HIS286 SER287 PRO288 LEU289 TYR290 ASN291 SER292 TYR293 ASN294 HIS295 HIS296 PHE297 MET298 GLU299 GLY300 GLU301 ALA302 MET303 ARG304 THR305 LYS306 PHE307 GLU308 ALA309 TRP310 PHE311 VAL312 LYS313 TYR314 LYS315 VAL316 ASP317 VAL318 VAL319 PHE320 ALA321 GLY322 HIS323 VAL324 HIS325 ALA326 TYR327 GLU328 ARG329 SER330 GLU331 ARG332 VAL333 SER334 ASN335 ILE336 ALA337 TYR338 LYS339 ILE340 THR341 ASN342 GLY343 LEU344 CYS345 THR346 PRO347 VAL348 LYS349 ASP350 GLN351 SER352 ALA353 PRO354 VAL355 TYR356 ILE357 THR358 ILE359 GLY360 ASP361 ALA362 GLY363 ASN364 TYR365 GLY366 VAL367 ILE368 ASP369 SER370 ASN371 MET372 ILE373 GLN374 PRO375 GLN376 PRO377 GLU378 TYR379 SER380 ALA381 PHE382 ARG383 GLU384 ALA385 SER386 PHE387 GLY388 HIS389 GLY390 MET391 PHE392 ASP393 ILE394 LYS395 ASN396 ARG397 THR398 HIS399 ALA400 HIS401 PHE402 SER403 TRP404 ASN405 ARG406 ASN407 GLN408 ASP409 GLY410 VAL411 ALA412 VAL413 GLU414 ALA415 ASP416 SER417 VAL418 TRP419 PHE420 PHE421 ASN422 ARG423 HIS424 TRP425 TYR426 PRO427 VAL428 ASP429 ASP430 SER431 THR432
Unit 3 ARG9 ASP10 MET11 PRO12 LEU13 ASP14 SER15 ASP16 VAL17 PHE18 ARG19 VAL20 PRO21 PRO22 GLY23 TYR24 ASN25 ALA26 PRO27 GLN28 GLN29 VAL30 HIS31 ILE32 THR33 GLN34 GLY35 ASP36 LEU37 VAL38 GLY39 ARG40 ALA41 MET42 ILE43 ILE44 SER45 TRP46 VAL47 THR48 MET49 ASP50 GLU51 PRO52 GLY53 SER54 SER55 ALA56 VAL57 ARG58 TYR59 TRP60 SER61 GLU62 LYS63 ASN64 GLY65 ARG66 LYS67 ARG68 ILE69 ALA70 LYS71 GLY72 LYS73 MET74 SER75 THR76 TYR77 ARG78 PHE79 PHE80 ASN81 TYR82 SER83 SER84 GLY85 PHE86 ILE87 HIS88 HIS89 THR90 THR91 ILE92 ARG93 LYS94 LEU95 LYS96 TYR97 ASN98 THR99 LYS100 TYR101 TYR102 TYR103 GLU104 VAL105 GLY106 LEU107 ARG108 ASN109 THR110 THR111 ARG112 ARG113 PHE114 SER115 PHE116 ILE117 THR118 PRO119 PRO120 GLN121 THR122 GLY123 LEU124 ASP125 VAL126 PRO127 TYR128 THR129 PHE130 GLY131 LEU132 ILE133 GLY134 ASP135 LEU136 GLY137 GLN138 SER139 PHE140 ASP141 SER142 ASN143 THR144 THR145 LEU146 SER147 HIS148 TYR149 GLU150 LEU151 SER152 PRO153 LYS154 LYS155 GLY156 GLN157 THR158 VAL159 LEU160 PHE161 VAL162 GLY163 ASP164 LEU165 SER166 TYR167 ALA168 ASP169 ARG170 TYR171 PRO172 ASN173 HIS174 ASP175 ASN176 VAL177 ARG178 TRP179 ASP180 THR181 TRP182 GLY183 ARG184 PHE185 THR186 GLU187 ARG188 SER189 VAL190 ALA191 TYR192 GLN193 PRO194 TRP195 ILE196 TRP197 THR198 ALA199 GLY200 ASN201 HIS202 GLU203 ILE204 GLU205 PHE206 ALA207 PRO208 GLU209 ILE210 ASN211 GLU212 THR213 GLU214 PRO215 PHE216 LYS217 PRO218 PHE219 SER220 TYR221 ARG222 TYR223 HIS224 VAL225 PRO226 TYR227 GLU228 ALA229 SER230 GLN231 SER232 THR233 SER234 PRO235 PHE236 TRP237 TYR238 SER239 ILE240 LYS241 ARG242 ALA243 SER244 ALA245 HIS246 ILE247 ILE248 VAL249 LEU250 SER251 SER252 TYR253 SER254 ALA255 TYR256 GLY257 ARG258 GLY259 THR260 PRO261 GLN262 TYR263 THR264 TRP265 LEU266 LYS267 LYS268 GLU269 LEU270 ARG271 LYS272 VAL273 LYS274 ARG275 SER276 GLU277 THR278 PRO279 TRP280 LEU281 ILE282 VAL283 LEU284 MET285 HIS286 SER287 PRO288 LEU289 TYR290 ASN291 SER292 TYR293 ASN294 HIS295 HIS296 PHE297 MET298 GLU299 GLY300 GLU301 ALA302 MET303 ARG304 THR305 LYS306 PHE307 GLU308 ALA309 TRP310 PHE311 VAL312 LYS313 TYR314 LYS315 VAL316 ASP317 VAL318 VAL319 PHE320 ALA321 GLY322 HIS323 VAL324 HIS325 ALA326 TYR327 GLU328 ARG329 SER330 GLU331 ARG332 VAL333 SER334 ASN335 ILE336 ALA337 TYR338 LYS339 ILE340 THR341 ASN342 GLY343 LEU344 CYS345 THR346 PRO347 VAL348 LYS349 ASP350 GLN351 SER352 ALA353 PRO354 VAL355 TYR356 ILE357 THR358 ILE359 GLY360 ASP361 ALA362 GLY363 ASN364 TYR365 GLY366 VAL367 ILE368 ASP369 SER370 ASN371 MET372 ILE373 GLN374 PRO375 GLN376 PRO377 GLU378 TYR379 SER380 ALA381 PHE382 ARG383 GLU384 ALA385 SER386 PHE387 GLY388 HIS389 GLY390 MET391 PHE392 ASP393 ILE394 LYS395 ASN396 ARG397 THR398 HIS399 ALA400 HIS401 PHE402 SER403 TRP404 ASN405 ARG406 ASN407 GLN408 ASP409 GLY410 VAL411 ALA412 VAL413 GLU414 ALA415 ASP416 SER417 VAL418 TRP419 PHE420 PHE421 ASN422 ARG423 HIS424 TRP425 TYR426 PRO427 VAL428 ASP429 ASP430 SER431 THR432
Unit 4 ARG9 ASP10 MET11 PRO12 LEU13 ASP14 SER15 ASP16 VAL17 PHE18 ARG19 VAL20 PRO21 PRO22 GLY23 TYR24 ASN25 ALA26 PRO27 GLN28 GLN29 VAL30 HIS31 ILE32 THR33 GLN34 GLY35 ASP36 LEU37 VAL38 GLY39 ARG40 ALA41 MET42 ILE43 ILE44 SER45 TRP46 VAL47 THR48 MET49 ASP50 GLU51 PRO52 GLY53 SER54 SER55 ALA56 VAL57 ARG58 TYR59 TRP60 SER61 GLU62 LYS63 ASN64 GLY65 ARG66 LYS67 ARG68 ILE69 ALA70 LYS71 GLY72 LYS73 MET74 SER75 THR76 TYR77 ARG78 PHE79 PHE80 ASN81 TYR82 SER83 SER84 GLY85 PHE86 ILE87 HIS88 HIS89 THR90 THR91 ILE92 ARG93 LYS94 LEU95 LYS96 TYR97 ASN98 THR99 LYS100 TYR101 TYR102 TYR103 GLU104 VAL105 GLY106 LEU107 ARG108 ASN109 THR110 THR111 ARG112 ARG113 PHE114 SER115 PHE116 ILE117 THR118 PRO119 PRO120 GLN121 THR122 GLY123 LEU124 ASP125 VAL126 PRO127 TYR128 THR129 PHE130 GLY131 LEU132 ILE133 GLY134 ASP135 LEU136 GLY137 GLN138 SER139 PHE140 ASP141 SER142 ASN143 THR144 THR145 LEU146 SER147 HIS148 TYR149 GLU150 LEU151 SER152 PRO153 LYS154 LYS155 GLY156 GLN157 THR158 VAL159 LEU160 PHE161 VAL162 GLY163 ASP164 LEU165 SER166 TYR167 ALA168 ASP169 ARG170 TYR171 PRO172 ASN173 HIS174 ASP175 ASN176 VAL177 ARG178 TRP179 ASP180 THR181 TRP182 GLY183 ARG184 PHE185 THR186 GLU187 ARG188 SER189 VAL190 ALA191 TYR192 GLN193 PRO194 TRP195 ILE196 TRP197 THR198 ALA199 GLY200 ASN201 HIS202 GLU203 ILE204 GLU205 PHE206 ALA207 PRO208 GLU209 ILE210 ASN211 GLU212 THR213 GLU214 PRO215 PHE216 LYS217 PRO218 PHE219 SER220 TYR221 ARG222 TYR223 HIS224 VAL225 PRO226 TYR227 GLU228 ALA229 SER230 GLN231 SER232 THR233 SER234 PRO235 PHE236 TRP237 TYR238 SER239 ILE240 LYS241 ARG242 ALA243 SER244 ALA245 HIS246 ILE247 ILE248 VAL249 LEU250 SER251 SER252 TYR253 SER254 ALA255 TYR256 GLY257 ARG258 GLY259 THR260 PRO261 GLN262 TYR263 THR264 TRP265 LEU266 LYS267 LYS268 GLU269 LEU270 ARG271 LYS272 VAL273 LYS274 ARG275 SER276 GLU277 THR278 PRO279 TRP280 LEU281 ILE282 VAL283 LEU284 MET285 HIS286 SER287 PRO288 LEU289 TYR290 ASN291 SER292 TYR293 ASN294 HIS295 HIS296 PHE297 MET298 GLU299 GLY300 GLU301 ALA302 MET303 ARG304 THR305 LYS306 PHE307 GLU308 ALA309 TRP310 PHE311 VAL312 LYS313 TYR314 LYS315 VAL316 ASP317 VAL318 VAL319 PHE320 ALA321 GLY322 HIS323 VAL324 HIS325 ALA326 TYR327 GLU328 ARG329 SER330 GLU331 ARG332 VAL333 SER334 ASN335 ILE336 ALA337 TYR338 LYS339 ILE340 THR341 ASN342 GLY343 LEU344 CYS345 THR346 PRO347 VAL348 LYS349 ASP350 GLN351 SER352 ALA353 PRO354 VAL355 TYR356 ILE357 THR358 ILE359 GLY360 ASP361 ALA362 GLY363 ASN364 TYR365 GLY366 VAL367 ILE368 ASP369 SER370 ASN371 MET372 ILE373 GLN374 PRO375 GLN376 PRO377 GLU378 TYR379 SER380 ALA381 PHE382 ARG383 GLU384 ALA385 SER386 PHE387 GLY388 HIS389 GLY390 MET391 PHE392 ASP393 ILE394 LYS395 ASN396 ARG397 THR398 HIS399 ALA400 HIS401 PHE402 SER403 TRP404 ASN405 ARG406 ASN407 GLN408 ASP409 GLY410 VAL411 ALA412 VAL413 GLU414 ALA415 ASP416 SER417 VAL418 TRP419 PHE420 PHE421 ASN422 ARG423 HIS424 TRP425 TYR426 PRO427 VAL428 ASP429 ASP430 SER431 THR432
Ligands
Unit 5 FE433 ZN434 SO4435 F436 NAG437 NAG438 NAG439 NAG440 SO4441 NA442 NA443 NA444
Unit 6 FE433 ZN434 SO4435 F436 NAG437 NAG438 NAG439 NAG440 SO4441 NA442 NA443 NA444
Unit 7 FE433 ZN434 SO4435 F436 NAG437 NAG438 NAG439 NAG440 SO4441 NA442 NA443 NA444
Unit 8 FE433 ZN434 SO4435 F436 NAG437 NAG438 NAG439 NAG440 SO4441 NA442 NA443
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany