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(-) Description

Title :  CRYSTAL STRUCTURE OF (A+CTE)4 CHIMERIC FORM OF PHOTOSYNTETIC GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, COMPLEXED WITH NADP
 
Authors :  S. Fermani, G. Falini, A. Ripamonti
Date :  18 Apr 07  (Deposition) - 19 Jun 07  (Release) - 12 Nov 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A,B,C,D,H,I,L,M,O,P,Q,R
Biol. Unit 1:  O,P,Q,R  (1x)
Biol. Unit 2:  A,B,C,D  (1x)
Biol. Unit 3:  H,I,L,M  (1x)
Keywords :  Chimeric Protein, Rossmann Fold, Nadp Complex, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Fermani, F. Sparla, G. Falini, P. L. Martelli, R. Casadio, P. Pupillo, A. Ripamonti, P. Trost
Molecular Mechanism Of Thioredoxin Regulation In Photosynthetic A2B2-Glyceraldehyde-3-Phosphate Dehydrogenase.
Proc. Natl. Acad. Sci. Usa V. 104 11109 2007
PubMed-ID: 17573533  |  Reference-DOI: 10.1073/PNAS.0611636104
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE AOR
    Chains: O, R, P, Q, A, B, C, D, H, I, L, M
    EC Number: 1.2.1.13
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET-29
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: EXPRESSION PLASMID
    Gene: GAPA
    Organism Common: SPINACH
    Organism Scientific: SPINACIA OLERACEA
    Organism Taxid: 3562
    Synonym: NADP-DEPENDENT GLYCERALDEHYDEPHOSPHATE DEHYDROGENASE SUBUNIT A

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDHILMOPQR
Biological Unit 1 (1x):         OPQR
Biological Unit 2 (1x): ABCD        
Biological Unit 3 (1x):     HILM    

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 46)

Asymmetric Unit (2, 46)
No.NameCountTypeFull Name
1NDP12Ligand/IonNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
2SO434Ligand/IonSULFATE ION
Biological Unit 1 (2, 17)
No.NameCountTypeFull Name
1NDP4Ligand/IonNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
2SO413Ligand/IonSULFATE ION
Biological Unit 2 (2, 14)
No.NameCountTypeFull Name
1NDP4Ligand/IonNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
2SO410Ligand/IonSULFATE ION
Biological Unit 3 (2, 15)
No.NameCountTypeFull Name
1NDP4Ligand/IonNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
2SO411Ligand/IonSULFATE ION

(-) Sites  (46, 46)

Asymmetric Unit (46, 46)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR O:179 , ASP O:181 , ARG O:195 , ARG O:231 , NDP O:372BINDING SITE FOR RESIDUE SO4 O 363
02AC2SOFTWARESER O:148 , THR O:150 , THR O:208 , GLY O:209 , ALA O:210BINDING SITE FOR RESIDUE SO4 O 364
03AC3SOFTWAREPHE O:251 , ALA O:252 , GLU O:253BINDING SITE FOR RESIDUE SO4 O 371
04AC4SOFTWARETHR R:179 , ASP R:181 , ARG R:195 , ARG R:231 , SO4 R:364 , NDP R:377BINDING SITE FOR RESIDUE SO4 R 363
05AC5SOFTWARESER R:148 , CYS R:149 , THR R:150 , THR R:208 , SO4 R:363BINDING SITE FOR RESIDUE SO4 R 364
06AC6SOFTWAREPHE R:251 , ALA R:252 , VAL R:299BINDING SITE FOR RESIDUE SO4 R 376
07AC7SOFTWARETHR P:179 , ASP P:181 , ARG P:195 , ARG P:231 , SO4 P:364 , NDP P:373BINDING SITE FOR RESIDUE SO4 P 363
08AC8SOFTWARESER P:148 , CYS P:149 , THR P:150 , HIS P:176 , THR P:208 , GLY P:209 , SO4 P:363BINDING SITE FOR RESIDUE SO4 P 364
09AC9SOFTWAREGLU P:253 , ASN P:256 , ARG P:260BINDING SITE FOR RESIDUE SO4 P 372
10BC1SOFTWARETHR Q:179 , ASP Q:181 , ARG Q:195 , ARG Q:231 , SO4 Q:364 , NDP Q:375BINDING SITE FOR RESIDUE SO4 Q 363
11BC2SOFTWARESER Q:148 , CYS Q:149 , THR Q:150 , HIS Q:176 , THR Q:208 , ARG Q:231 , SO4 Q:363BINDING SITE FOR RESIDUE SO4 Q 364
12BC3SOFTWAREGLU O:276 , SER Q:41 , HIS Q:42 , LYS Q:45 , TYR Q:46 , VAL Q:57BINDING SITE FOR RESIDUE SO4 Q 373
13BC4SOFTWARESER Q:62 , LYS Q:72BINDING SITE FOR RESIDUE SO4 Q 374
14BC5SOFTWARETHR A:179 , ASP A:181 , ARG A:195 , ARG A:231 , NDP A:376BINDING SITE FOR RESIDUE SO4 A 363
15BC6SOFTWARESER A:148 , CYS A:149 , THR A:150 , HIS A:176 , THR A:208 , GLY A:209BINDING SITE FOR RESIDUE SO4 A 364
16BC7SOFTWAREGLU A:253 , ASN A:256 , ARG A:260BINDING SITE FOR RESIDUE SO4 A 375
17BC8SOFTWARETHR B:179 , ASP B:181 , ARG B:195 , ARG B:231 , NDP B:378BINDING SITE FOR RESIDUE SO4 B 363
18BC9SOFTWARESER B:148 , CYS B:149 , THR B:150 , HIS B:176 , THR B:208BINDING SITE FOR RESIDUE SO4 B 364
19CC1SOFTWARESER B:41 , HIS B:42 , VAL B:57 , GLU C:276BINDING SITE FOR RESIDUE SO4 B 377
20CC2SOFTWARETHR C:179 , ASP C:181 , ARG C:195 , NDP C:365BINDING SITE FOR RESIDUE SO4 C 363
21CC3SOFTWARESER C:148 , THR C:150 , THR C:208 , GLY C:209 , ALA C:210BINDING SITE FOR RESIDUE SO4 C 364
22CC4SOFTWARETHR D:179 , ASP D:181 , ARG D:195 , ARG D:231 , NDP D:365BINDING SITE FOR RESIDUE SO4 D 363
23CC5SOFTWARESER D:148 , THR D:150 , THR D:208BINDING SITE FOR RESIDUE SO4 D 364
24CC6SOFTWARETHR H:179 , ASP H:181 , ARG H:195 , ARG H:231 , NDP H:379BINDING SITE FOR RESIDUE SO4 H 363
25CC7SOFTWARESER H:148 , CYS H:149 , THR H:150 , HIS H:176 , THR H:208BINDING SITE FOR RESIDUE SO4 H 364
26CC8SOFTWAREPHE H:251 , ALA H:252 , GLU H:253 , VAL H:299BINDING SITE FOR RESIDUE SO4 H 378
27CC9SOFTWARETHR I:179 , ASP I:181 , ARG I:195 , ARG I:231 , NDP I:380BINDING SITE FOR RESIDUE SO4 I 365
28DC1SOFTWARESER I:148 , THR I:208 , GLY I:209 , ALA I:210BINDING SITE FOR RESIDUE SO4 I 366
29DC2SOFTWAREGLU I:253 , ASN I:256 , ARG I:260 , SER I:294BINDING SITE FOR RESIDUE SO4 I 379
30DC3SOFTWARETHR L:179 , ASP L:181 , ARG L:195 , ARG L:231 , NDP L:369BINDING SITE FOR RESIDUE SO4 L 367
31DC4SOFTWARESER L:148 , THR L:150 , HIS L:176 , THR L:208 , GLY L:209BINDING SITE FOR RESIDUE SO4 L 368
32DC5SOFTWARETHR M:179 , ASP M:181 , ARG M:195 , ARG M:231 , NDP M:381BINDING SITE FOR RESIDUE SO4 M 369
33DC6SOFTWARESER M:148 , CYS M:149 , THR M:150 , THR M:208BINDING SITE FOR RESIDUE SO4 M 370
34DC7SOFTWARESER M:62 , LYS M:72BINDING SITE FOR RESIDUE SO4 M 380
35DC8SOFTWAREPHE O:8 , GLY O:9 , ARG O:10 , ILE O:11 , ASN O:31 , ASP O:76 , ARG O:77 , GLY O:95 , THR O:96 , GLY O:97 , VAL O:98 , PHE O:99 , THR O:119 , ALA O:120 , ASN O:313 , GLU O:314 , TYR O:317 , SO4 O:363 , ARG R:183 , SER R:188BINDING SITE FOR RESIDUE NDP O 372
36DC9SOFTWAREARG O:183 , SER O:188 , PHE R:8 , GLY R:9 , ARG R:10 , ILE R:11 , ASN R:31 , THR R:33 , ASP R:76 , ARG R:77 , GLY R:95 , THR R:96 , GLY R:97 , VAL R:98 , PHE R:99 , THR R:119 , ALA R:120 , ASN R:313 , GLU R:314 , TYR R:317 , SO4 R:363BINDING SITE FOR RESIDUE NDP R 377
37EC1SOFTWAREPHE P:8 , GLY P:9 , ARG P:10 , ILE P:11 , ASN P:31 , ASP P:76 , ARG P:77 , GLY P:95 , THR P:96 , GLY P:97 , PHE P:99 , THR P:119 , ALA P:120 , ASN P:313 , GLU P:314 , TYR P:317 , SO4 P:363 , ARG Q:183 , SER Q:188BINDING SITE FOR RESIDUE NDP P 373
38EC2SOFTWAREARG P:183 , SER P:188 , GLY Q:7 , PHE Q:8 , GLY Q:9 , ARG Q:10 , ILE Q:11 , ASN Q:31 , THR Q:33 , ASP Q:76 , ARG Q:77 , GLY Q:95 , THR Q:96 , GLY Q:97 , VAL Q:98 , PHE Q:99 , THR Q:119 , ALA Q:120 , CYS Q:149 , ASN Q:313 , TYR Q:317 , SO4 Q:363BINDING SITE FOR RESIDUE NDP Q 375
39EC3SOFTWAREGLY A:7 , PHE A:8 , GLY A:9 , ARG A:10 , ILE A:11 , ASN A:31 , ASP A:76 , ARG A:77 , GLY A:95 , THR A:96 , GLY A:97 , PHE A:99 , THR A:119 , ALA A:120 , ASN A:313 , GLU A:314 , TYR A:317 , SO4 A:363 , SER B:188BINDING SITE FOR RESIDUE NDP A 376
40EC4SOFTWARESER A:188 , GLY B:7 , PHE B:8 , GLY B:9 , ARG B:10 , ILE B:11 , ASN B:31 , ASP B:76 , ARG B:77 , GLY B:95 , THR B:96 , GLY B:97 , VAL B:98 , PHE B:99 , THR B:119 , ALA B:120 , ASN B:313 , TYR B:317 , SO4 B:363BINDING SITE FOR RESIDUE NDP B 378
41EC5SOFTWAREPHE C:8 , GLY C:9 , ARG C:10 , ILE C:11 , ASN C:31 , ASP C:76 , ARG C:77 , GLY C:95 , THR C:96 , GLY C:97 , VAL C:98 , PHE C:99 , THR C:119 , ALA C:120 , ASN C:313 , GLU C:314 , TYR C:317 , SO4 C:363 , ARG D:183 , SER D:188BINDING SITE FOR RESIDUE NDP C 365
42EC6SOFTWAREARG C:183 , SER C:188 , PHE D:8 , GLY D:9 , ARG D:10 , ILE D:11 , ASN D:31 , ASP D:76 , ARG D:77 , GLY D:95 , THR D:96 , GLY D:97 , VAL D:98 , PHE D:99 , THR D:119 , ALA D:120 , ASN D:313 , TYR D:317 , SO4 D:363BINDING SITE FOR RESIDUE NDP D 365
43EC7SOFTWAREPHE H:8 , GLY H:9 , ARG H:10 , ILE H:11 , ASN H:31 , ASP H:76 , ARG H:77 , GLY H:95 , THR H:96 , GLY H:97 , VAL H:98 , PHE H:99 , THR H:119 , ALA H:120 , CYS H:149 , ASN H:313 , TYR H:317 , SO4 H:363 , SER I:188BINDING SITE FOR RESIDUE NDP H 379
44EC8SOFTWAREARG H:183 , SER H:188 , GLY I:7 , PHE I:8 , GLY I:9 , ARG I:10 , ILE I:11 , ASN I:31 , ASP I:76 , ARG I:77 , GLY I:95 , THR I:96 , GLY I:97 , VAL I:98 , PHE I:99 , THR I:119 , ALA I:120 , ASN I:313 , TYR I:317 , SO4 I:365BINDING SITE FOR RESIDUE NDP I 380
45EC9SOFTWAREGLY L:7 , PHE L:8 , GLY L:9 , ARG L:10 , ILE L:11 , ASN L:31 , ASP L:76 , ARG L:77 , GLY L:95 , THR L:96 , GLY L:97 , VAL L:98 , PHE L:99 , THR L:119 , ALA L:120 , CYS L:149 , ASN L:313 , TYR L:317 , SO4 L:367 , ARG M:183 , SER M:188BINDING SITE FOR RESIDUE NDP L 369
46FC1SOFTWARESER L:188 , GLY M:7 , PHE M:8 , GLY M:9 , ARG M:10 , ILE M:11 , ASN M:31 , ASP M:76 , ARG M:77 , GLY M:95 , THR M:96 , GLY M:97 , VAL M:98 , PHE M:99 , THR M:119 , ALA M:120 , ASN M:313 , TYR M:317 , SO4 M:369BINDING SITE FOR RESIDUE NDP M 381

(-) SS Bonds  (6, 6)

Asymmetric Unit
No.Residues
1A:200 -B:200
2C:200 -D:200
3H:200 -I:200
4L:200 -M:200
5O:200 -R:200
6P:200 -Q:200

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2PKR)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2PKR)

(-) PROSITE Motifs  (1, 12)

Asymmetric Unit (1, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GAPDHPS00071 Glyceraldehyde 3-phosphate dehydrogenase active site.G3PA_SPIOL216-223
 
 
 
 
 
 
 
 
 
 
 		  12A:147-154
B:147-154
C:147-154
D:147-154
H:147-154
I:147-154
L:147-154
M:147-154
O:147-154
P:147-154
Q:147-154
R:147-154
Biological Unit 1 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GAPDHPS00071 Glyceraldehyde 3-phosphate dehydrogenase active site.G3PA_SPIOL216-223
 
 
 
 
 
 
 
 
 
 
 		  4-
-
-
-
-
-
-
-
O:147-154
P:147-154
Q:147-154
R:147-154
Biological Unit 2 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GAPDHPS00071 Glyceraldehyde 3-phosphate dehydrogenase active site.G3PA_SPIOL216-223
 
 
 
 
 
 
 
 
 
 
 		  4A:147-154
B:147-154
C:147-154
D:147-154
-
-
-
-
-
-
-
-
Biological Unit 3 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GAPDHPS00071 Glyceraldehyde 3-phosphate dehydrogenase active site.G3PA_SPIOL216-223
 
 
 
 
 
 
 
 
 
 
 		  4-
-
-
-
H:147-154
I:147-154
L:147-154
M:147-154
-
-
-
-

(-) Exons   (0, 0)

(no "Exon" information available for 2PKR)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:337
 aligned with G3PA_SPIOL | P19866 from UniProtKB/Swiss-Prot  Length:401

    Alignment length:337
                                                                                                                                                                                                                                                                                                                                                                         401 
                                    75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395     | 
          G3PA_SPIOL     66 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ-    -
               SCOP domains d2pkra1 A:0-148,A:313-333 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d2pkra2 A:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                 d2pkra1              - SCOP domains
               CATH domains -2pkrA01 A:1-147,A:314-333 NAD(P)-binding Rossmann-like Domain                                                                                         2pkrA02 A:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                            2pkrA01             - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhh..........eee....eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeeee.........................eee.....hhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee.hhheee...eeeeeeee..hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2pkr A    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQG  334
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 126       136       146       156       166       176       186 ||    197       207       217       227       237       247       257       267       277       287       297       307       317       327       
                                             18A|              34|                      60A                                                           122A                                                               188|                                                                                                                                                
                                              18B               36                                                                                                                                                        190                                                                                                                                                


Chain B from PDB  Type:PROTEIN  Length:337
 aligned with G3PA_SPIOL | P19866 from UniProtKB/Swiss-Prot  Length:401

    Alignment length:337
                                                                                                                                                                                                                                                                                                                                                                         401 
                                    75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395     | 
          G3PA_SPIOL     66 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ-    -
               SCOP domains d2pkrb1 B:0-148,B:313-333 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d2pkrb2 B:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                 d2pkrb1              - SCOP domains
               CATH domains -2pkrB01 B:1-147,B:314-333 NAD(P)-binding Rossmann-like Domain                                                                                         2pkrB02 B:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                            2pkrB01             - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhh..........eee....eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeeee.........................eee.....hhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee.hhheee...eeeeeeee..hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2pkr B    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQG  334
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 126       136       146       156       166       176       186 ||    197       207       217       227       237       247       257       267       277       287       297       307       317       327       
                                             18A|              34|                      60A                                                           122A                                                               188|                                                                                                                                                
                                              18B               36                                                                                                                                                        190                                                                                                                                                


Chain C from PDB  Type:PROTEIN  Length:337
 aligned with G3PA_SPIOL | P19866 from UniProtKB/Swiss-Prot  Length:401

    Alignment length:337
                                                                                                                                                                                                                                                                                                                                                                         401 
                                    75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395     | 
          G3PA_SPIOL     66 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ-    -
               SCOP domains d2pkrc1 C:0-148,C:313-333 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d2pkrc2 C:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                 d2pkrc1              - SCOP domains
               CATH domains -2pkrC01 C:1-147,C:314-333 NAD(P)-binding Rossmann-like Domain                                                                                         2pkrC02 C:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                            2pkrC01             - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhh.....eeeeeee...hhhhhhhhhhh..........eee....eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeeee.........................eee..hhhhhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhh......eeee....hhhhhh.....eeee.hhheee...eeeeeeee..hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2pkr C    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQG  334
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 126       136       146       156       166       176       186 ||    197       207       217       227       237       247       257       267       277       287       297       307       317       327       
                                             18A|              34|                      60A                                                           122A                                                               188|                                                                                                                                                
                                              18B               36                                                                                                                                                        190                                                                                                                                                


Chain D from PDB  Type:PROTEIN  Length:336
 aligned with G3PA_SPIOL | P19866 from UniProtKB/Swiss-Prot  Length:401

    Alignment length:336
                                    75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395      
          G3PA_SPIOL     66 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ  401
               SCOP domains d2pkrd1 D:0-148,D:313-333 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d2pkrd2 D:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                 d2pkrd1               SCOP domains
               CATH domains -2pkrD01 D:1-147,D:314-333 NAD(P)-binding Rossmann-like Domain                                                                                         2pkrD02 D:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                            2pkrD01              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhh.....eeeeeee...hhhhhhhhhhh..........eee....eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhh.eeeeeeeeeee.........................eee..hhhhhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhh......eeee....hhhhhh.....eeee.hhheee...eeeeeeee..hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                2pkr D    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ  333
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 126       136       146       156       166       176       186 ||    197       207       217       227       237       247       257       267       277       287       297       307       317       327      
                                             18A|              34|                      60A                                                           122A                                                               188|                                                                                                                                               
                                              18B               36                                                                                                                                                        190                                                                                                                                               


Chain H from PDB  Type:PROTEIN  Length:336
 aligned with G3PA_SPIOL | P19866 from UniProtKB/Swiss-Prot  Length:401

    Alignment length:336
                                    75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395      
          G3PA_SPIOL     66 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ  401
               SCOP domains d2pkrh1 H:0-148,H:313-333 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d2pkrh2 H:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                 d2pkrh1               SCOP domains
               CATH domains -2pkrH01 H:1-147,H:314-333 NAD(P)-binding Rossmann-like Domain                                                                                         2pkrH02 H:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                            2pkrH01              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhh..........eee....eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeeee.........................eee...hhhhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhh......eeee....hhhhhh.....eeee.hhheee...eeeeeeee..hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                2pkr H    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ  333
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 126       136       146       156       166       176       186 ||    197       207       217       227       237       247       257       267       277       287       297       307       317       327      
                                             18A|              34|                      60A                                                           122A                                                               188|                                                                                                                                               
                                              18B               36                                                                                                                                                        190                                                                                                                                               


Chain I from PDB  Type:PROTEIN  Length:337
 aligned with G3PA_SPIOL | P19866 from UniProtKB/Swiss-Prot  Length:401

    Alignment length:337
                                                                                                                                                                                                                                                                                                                                                                         401 
                                    75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395     | 
          G3PA_SPIOL     66 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ-    -
               SCOP domains d2pkri1 I:0-148,I:313-333 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d2pkri2 I:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                 d2pkri1              - SCOP domains
               CATH domains -2pkrI01 I:1-147,I:314-333 NAD(P)-binding Rossmann-like Domain                                                                                         2pkrI02 I:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                            2pkrI01             - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhh.....eeeeeee...hhhhhhhhhhh..........eee....eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhh.eeeeeeeeeee.........................eeee.hhhhhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee.hhheee...eeeeeeee..hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2pkr I    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQG  334
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 126       136       146       156       166       176       186 ||    197       207       217       227       237       247       257       267       277       287       297       307       317       327       
                                             18A|              34|                      60A                                                           122A                                                               188|                                                                                                                                                
                                              18B               36                                                                                                                                                        190                                                                                                                                                


Chain L from PDB  Type:PROTEIN  Length:336
 aligned with G3PA_SPIOL | P19866 from UniProtKB/Swiss-Prot  Length:401

    Alignment length:336
                                    75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395      
          G3PA_SPIOL     66 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ  401
               SCOP domains d2pkrl1 L:0-148,L:313-333 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d2pkrl2 L:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                 d2pkrl1               SCOP domains
               CATH domains -2pkrL01 L:1-147,L:314-333 NAD(P)-binding Rossmann-like Domain                                                                                         2pkrL02 L:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                            2pkrL01              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhh.....eeeeeee...hhhhhhhhhhh..........eee....eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeeee.........................eeee..hhhhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee.hhheee...eeeeeeee..hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                2pkr L    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ  333
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 126       136       146       156       166       176       186 ||    197       207       217       227       237       247       257       267       277       287       297       307       317       327      
                                             18A|              34|                      60A                                                           122A                                                               188|                                                                                                                                               
                                              18B               36                                                                                                                                                        190                                                                                                                                               


Chain M from PDB  Type:PROTEIN  Length:337
 aligned with G3PA_SPIOL | P19866 from UniProtKB/Swiss-Prot  Length:401

    Alignment length:337
                                                                                                                                                                                                                                                                                                                                                                         401 
                                    75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395     | 
          G3PA_SPIOL     66 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ-    -
               SCOP domains d2pkrm1 M:0-148,M:313-333 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d2pkrm2 M:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                 d2pkrm1              - SCOP domains
               CATH domains -2pkrM01 M:1-147,M:314-333 NAD(P)-binding Rossmann-like Domain                                                                                         2pkrM02 M:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                            2pkrM01             - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhh.....eeeeeee...hhhhhhhhhhh..........eee....eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeeee.........................eeee.hhhhhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee.hhheee...eeeeeeee..hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2pkr M    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQG  334
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 126       136       146       156       166       176       186 ||    197       207       217       227       237       247       257       267       277       287       297       307       317       327       
                                             18A|              34|                      60A                                                           122A                                                               188|                                                                                                                                                
                                              18B               36                                                                                                                                                        190                                                                                                                                                


Chain O from PDB  Type:PROTEIN  Length:337
 aligned with G3PA_SPIOL | P19866 from UniProtKB/Swiss-Prot  Length:401

    Alignment length:337
                                                                                                                                                                                                                                                                                                                                                                         401 
                                    75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395     | 
          G3PA_SPIOL     66 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ-    -
               SCOP domains d2pkro1 O:0-148,O:313-333 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d2pkro2 O:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                 d2pkro1              - SCOP domains
               CATH domains -2pkrO01 O:1-147,O:314-333 NAD(P)-binding Rossmann-like Domain                                                                                         2pkrO02 O:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                            2pkrO01             - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhh.....eeeeeee...hhhhhhhhhhh..........eeee...eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeeee.........................eee..hhhhhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhh......eeee....hhhhhh.....eeee.hhheee...eeeeeeee..hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2pkr O    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQG  334
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 126       136       146       156       166       176       186 ||    197       207       217       227       237       247       257       267       277       287       297       307       317       327       
                                             18A|              34|                      60A                                                           122A                                                               188|                                                                                                                                                
                                              18B               36                                                                                                                                                        190                                                                                                                                                


Chain P from PDB  Type:PROTEIN  Length:337
 aligned with G3PA_SPIOL | P19866 from UniProtKB/Swiss-Prot  Length:401

    Alignment length:337
                                                                                                                                                                                                                                                                                                                                                                         401 
                                    75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395     | 
          G3PA_SPIOL     66 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ-    -
               SCOP domains d2pkrp1 P:0-148,P:313-333 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d2pkrp2 P:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                 d2pkrp1              - SCOP domains
               CATH domains -2pkrP01 P:1-147,P:314-333 NAD(P)-binding Rossmann-like Domain                                                                                         2pkrP02 P:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                            2pkrP01             - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhh..........eee....eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeeee.........................eee.....hhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee.hhheee...eeeeeeee..hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2pkr P    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQG  334
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 126       136       146       156       166       176       186 ||    197       207       217       227       237       247       257       267       277       287       297       307       317       327       
                                             18A|              34|                      60A                                                           122A                                                               188|                                                                                                                                                
                                              18B               36                                                                                                                                                        190                                                                                                                                                


Chain Q from PDB  Type:PROTEIN  Length:337
 aligned with G3PA_SPIOL | P19866 from UniProtKB/Swiss-Prot  Length:401

    Alignment length:337
                                                                                                                                                                                                                                                                                                                                                                         401 
                                    75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395     | 
          G3PA_SPIOL     66 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ-    -
               SCOP domains d2pkrq1 Q:0-148,Q:313-333 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d2pkrq2 Q:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                 d2pkrq1              - SCOP domains
               CATH domains -2pkrQ01 Q:1-147,Q:314-333 NAD(P)-binding Rossmann-like Domain                                                                                         2pkrQ02 Q:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                            2pkrQ01             - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhee...ee....eee....eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeeee.........................eee..hhhhhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee.hhheee...eeeeeeee..hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2pkr Q    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQG  334
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 126       136       146       156       166       176       186 ||    197       207       217       227       237       247       257       267       277       287       297       307       317       327       
                                             18A|              34|                      60A                                                           122A                                                               188|                                                                                                                                                
                                              18B               36                                                                                                                                                        190                                                                                                                                                


Chain R from PDB  Type:PROTEIN  Length:337
 aligned with G3PA_SPIOL | P19866 from UniProtKB/Swiss-Prot  Length:401

    Alignment length:337
                                                                                                                                                                                                                                                                                                                                                                         401 
                                    75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395     | 
          G3PA_SPIOL     66 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ-    -
               SCOP domains d2pkrr1 R:0-148,R:313-333 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d2pkrr2 R:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                 d2pkrr1              - SCOP domains
               CATH domains -2pkrR01 R:1-147,R:314-333 NAD(P)-binding Rossmann-like Domain                                                                                         2pkrR02 R:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                            2pkrR01             - CATH domains
           Pfam domains (1) -Gp_dh_N-2pkrR13 R:1-149                                                                                                                                 ----Gp_dh_C-2pkrR01 R:154-311                                                                                                                                    ----------------------- Pfam domains (1)
           Pfam domains (2) -Gp_dh_N-2pkrR14 R:1-149                                                                                                                                 ----Gp_dh_C-2pkrR02 R:154-311                                                                                                                                    ----------------------- Pfam domains (2)
           Pfam domains (3) -Gp_dh_N-2pkrR15 R:1-149                                                                                                                                 ----Gp_dh_C-2pkrR03 R:154-311                                                                                                                                    ----------------------- Pfam domains (3)
           Pfam domains (4) -Gp_dh_N-2pkrR16 R:1-149                                                                                                                                 ----Gp_dh_C-2pkrR04 R:154-311                                                                                                                                    ----------------------- Pfam domains (4)
           Pfam domains (5) -Gp_dh_N-2pkrR17 R:1-149                                                                                                                                 ----Gp_dh_C-2pkrR05 R:154-311                                                                                                                                    ----------------------- Pfam domains (5)
           Pfam domains (6) -Gp_dh_N-2pkrR18 R:1-149                                                                                                                                 ----Gp_dh_C-2pkrR06 R:154-311                                                                                                                                    ----------------------- Pfam domains (6)
           Pfam domains (7) -Gp_dh_N-2pkrR19 R:1-149                                                                                                                                 ----Gp_dh_C-2pkrR07 R:154-311                                                                                                                                    ----------------------- Pfam domains (7)
           Pfam domains (8) -Gp_dh_N-2pkrR20 R:1-149                                                                                                                                 ----Gp_dh_C-2pkrR08 R:154-311                                                                                                                                    ----------------------- Pfam domains (8)
           Pfam domains (9) -Gp_dh_N-2pkrR21 R:1-149                                                                                                                                 ----Gp_dh_C-2pkrR09 R:154-311                                                                                                                                    ----------------------- Pfam domains (9)
          Pfam domains (10) -Gp_dh_N-2pkrR22 R:1-149                                                                                                                                 ----Gp_dh_C-2pkrR10 R:154-311                                                                                                                                    ----------------------- Pfam domains (10)
          Pfam domains (11) -Gp_dh_N-2pkrR23 R:1-149                                                                                                                                 ----Gp_dh_C-2pkrR11 R:154-311                                                                                                                                    ----------------------- Pfam domains (11)
          Pfam domains (12) -Gp_dh_N-2pkrR24 R:1-149                                                                                                                                 ----Gp_dh_C-2pkrR12 R:154-311                                                                                                                                    ----------------------- Pfam domains (12)
         Sec.struct. author ..eeeee..hhhhhhhhhhhhhh.....eeeeee...hhhhhhhhhhh..........eee....eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhh.eeeeeeeeeee.........................eee..hhhhhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhh......eeee....hhhhhh.....eeee.hhheee...eeeeeeee..hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2pkr R    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQG  334
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 126       136       146       156       166       176       186 ||    197       207       217       227       237       247       257       267       277       287       297       307       317       327       
                                             18A|              34|                      60A                                                           122A                                                               188|                                                                                                                                                
                                              18B               36                                                                                                                                                        190
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 24)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)
(-)
Fold: NAD(P)-binding Rossmann-fold domains (1604)
(-)
Superfamily: NAD(P)-binding Rossmann-fold domains (1604)
(-)
Family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain (179)
(-)
Protein domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (61)
(-)
Spinach (Spinacia oleracea) [TaxId: 3562] (8)
2ad2pkra1A:0-148,A:313-333
2bd2pkrb1B:0-148,B:313-333
2cd2pkrc1C:0-148,C:313-333
2dd2pkrd1D:0-148,D:313-333
2ed2pkrh1H:0-148,H:313-333
2fd2pkri1I:0-148,I:313-333
2gd2pkrl1L:0-148,L:313-333
2hd2pkrm1M:0-148,M:313-333
2id2pkro1O:0-148,O:313-333
2jd2pkrp1P:0-148,P:313-333
2kd2pkrq1Q:0-148,Q:313-333
2ld2pkrr1R:0-148,R:313-333

(-) CATH Domains  (2, 24)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: 2-Layer Sandwich (8480)
(-)
Topology: Dihydrodipicolinate Reductase; domain 2 (182)
(-)
Homologous Superfamily: Dihydrodipicolinate Reductase; domain 2 (178)
(-)
Spinach (Spinacia oleracea) (8)
1a2pkrA02A:148-313
1b2pkrH02H:148-313
1c2pkrI02I:148-313
1d2pkrL02L:148-313
1e2pkrM02M:148-313
1f2pkrO02O:148-313
1g2pkrP02P:148-313
1h2pkrQ02Q:148-313
1i2pkrR02R:148-313
1j2pkrB02B:148-313
1k2pkrC02C:148-313
1l2pkrD02D:148-313
(-)
Architecture: 3-Layer(aba) Sandwich (12045)
(-)
Topology: Rossmann fold (7312)
(-)
Homologous Superfamily: NAD(P)-binding Rossmann-like Domain (1244)
(-)
Spinach (Spinacia oleracea) (10)
2a2pkrA01A:1-147,A:314-333
2b2pkrB01B:1-147,B:314-333
2c2pkrC01C:1-147,C:314-333
2d2pkrD01D:1-147,D:314-333
2e2pkrH01H:1-147,H:314-333
2f2pkrI01I:1-147,I:314-333
2g2pkrL01L:1-147,L:314-333
2h2pkrM01M:1-147,M:314-333
2i2pkrO01O:1-147,O:314-333
2j2pkrP01P:1-147,P:314-333
2k2pkrQ01Q:1-147,Q:314-333
2l2pkrR01R:1-147,R:314-333

(-) Pfam Domains  (2, 24)

Asymmetric Unit
(-)
Clan: GADPH_aa-bio_dh (59)
(-)
Family: Gp_dh_C (38)
(-)
Spinacia oleracea (Spinach) (5)
1aGp_dh_C-2pkrR01R:154-311
1bGp_dh_C-2pkrR02R:154-311
1cGp_dh_C-2pkrR03R:154-311
1dGp_dh_C-2pkrR04R:154-311
1eGp_dh_C-2pkrR05R:154-311
1fGp_dh_C-2pkrR06R:154-311
1gGp_dh_C-2pkrR07R:154-311
1hGp_dh_C-2pkrR08R:154-311
1iGp_dh_C-2pkrR09R:154-311
1jGp_dh_C-2pkrR10R:154-311
1kGp_dh_C-2pkrR11R:154-311
1lGp_dh_C-2pkrR12R:154-311
(-)
Clan: NADP_Rossmann (1239)

(-) Gene Ontology  (10, 10)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,H,I,L,M,O,P,Q,R   (G3PA_SPIOL | P19866)
molecular function
    GO:0051287    NAD binding    Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
    GO:0050661    NADP binding    Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
    GO:0047100    glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity    Catalysis of the reaction: phosphate + NADP+ + glyceraldehyde-3-phosphate = NADPH + 3-phospho-D-glyceroyl-phosphate.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016620    oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
biological process
    GO:0006006    glucose metabolic process    The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0019253    reductive pentose-phosphate cycle    The fixation of carbon dioxide (CO2) as glucose in the chloroplasts of C3 plants; uses ATP and NADPH formed in the light reactions of photosynthesis; carbon dioxide reacts with ribulose 1,5-bisphosphate (catalyzed by the function of ribulose-bisphosphate carboxylase) to yield two molecules of 3-phosphoglycerate; these are then phosphorylated by ATP to 1,3-bisphosphateglyceraldehyde which, in turn, is then reduced by NADPH to glyceraldehyde 3-phosphate. The glyceraldehyde 3-phosphate is converted to fructose 5-phosphate and ribulose 5-phosphate by aldolase and other enzymes; the ribulose 5-phosphate is phosphorylated by ATP to ribulose 1,5-bisphosphate.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.

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  2pkr
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  G3PA_SPIOL | P19866
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  1.2.1.13
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        G3PA_SPIOL | P19866: 1jn0 1nbo 1rm3 1rm4 1rm5 2hki 2pkq

(-) Related Entries Specified in the PDB File

1jn0 CRYSTAL STRUCTURE OF THE NON-REGULATORY A4 ISOFORM OF SPINACH CHLOROPLAST GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE COMPLEXED WITH NADP
1nbo CRYSTAL STRUCTURE OF THE A4 ISOFORM OF PHOTOSYNTHETIC GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, COMPLEXED WITH NAD
1rm3 CRYSTAL STRUCTURE OF MUTANT T33A OF PHOTOSYNTHETIC GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE A4 ISOFORM, COMPLEXED WITH NADP
1rm4 CRYSTAL STRUCTURE OF RECOMBINANT PHOTOSYNTHETIC GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE A4 ISOFORM, COMPLEXED WITH NADP
1rm5 CRYSTAL STRUCTURE OF MUTANT S188A OF PHOTOSYNTHETIC GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE A4 ISOFORM, COMPLEXED WITH NADP
2pkr