2PKQ - JenaLib

Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF THE PHOTOSYNTHETIC A2B2-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, COMPLEXED WITH NADP

Authors :   S. Fermani, G. Falini, A. Ripamonti

Date :   18 Apr 07 (Deposition) - 19 Jun 07 (Release) - 12 Nov 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.60

Chains :   Asym. Unit : O,P,Q,R,S,T
Biol. Unit 1: O,P,Q,R  (1x)
Biol. Unit 2: S,T  (2x)

Keywords :   Rossmann Fold, Protein-Nadp Complex, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. Fermani, F. Sparla, G. Falini, P. L. Martelli, R. Casadio, P. Pupillo, A. Ripamonti, P. Trost
Molecular Mechanism Of Thioredoxin Regulation In Photosynthetic A2B2-Glyceraldehyde-3-Phosphate Dehydrogenase.
Proc. Natl. Acad. Sci. Usa V. 104 11109 2007
PubMed-ID: 17573533 | Reference-DOI: 10.1073/PNAS.0611636104
(for further references see the PDB file header)

Molecule 1 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B
	Chains	:	O, Q, T
	EC Number	:	1.2.1.13
	Organism Common	:	SPINACH
	Organism Scientific	:	SPINACIA OLERACEA
	Organism Taxid	:	3562
	Other Details	:	CHLOROPLASTS (LEAVES)
	Synonym	:	NADP-DEPENDENT GLYCERALDEHYDEPHOSPHATE DEHYDROGENASE SUBUNIT B

Molecule 2 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE A
	Chains	:	P, R, S
	EC Number	:	1.2.1.13
	Organism Common	:	SPINACH
	Organism Scientific	:	SPINACIA OLERACEA
	Organism Taxid	:	3562
	Other Details	:	CHLOROPLASTS (LEAVES)
	Synonym	:	NADP-DEPENDENT GLYCERALDEHYDEPHOSPHATE DEHYDROGENASE SUBUNIT A

		1	2	3	4	5	6
Asymmetric Unit	:	O	P	Q	R	S	T
Biological Unit 1 (1x)	:	O	P	Q	R
Biological Unit 2 (2x)	:					S	T

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 21)

No.	Name	Count	Type	Full Name
1	NDP	6	Ligand/Ion	NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
2	SO4	15	Ligand/Ion	SULFATE ION

Biological Unit 1 (2, 13)

No.	Name	Count	Type	Full Name
1	NDP	4	Ligand/Ion	NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
2	SO4	9	Ligand/Ion	SULFATE ION

Biological Unit 2 (2, 16)

No.	Name	Count	Type	Full Name
1	NDP	4	Ligand/Ion	NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
2	SO4	12	Ligand/Ion	SULFATE ION

Asymmetric Unit (21, 21)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	THR O:179 , ASP O:181 , NDP O:363	BINDING SITE FOR RESIDUE SO4 O 370
02	AC2	SOFTWARE	THR P:179 , ASP P:181 , ARG P:195	BINDING SITE FOR RESIDUE SO4 P 371
03	AC3	SOFTWARE	SER P:148 , CYS P:149 , THR P:150 , THR P:208	BINDING SITE FOR RESIDUE SO4 P 372
04	AC4	SOFTWARE	ASP Q:181 , ARG Q:195 , ARG Q:231 , TYR Q:361 , NDP Q:365	BINDING SITE FOR RESIDUE SO4 Q 373
05	AC5	SOFTWARE	THR R:179 , ASP R:181 , ARG R:195 , NDP R:366	BINDING SITE FOR RESIDUE SO4 R 374
06	AC6	SOFTWARE	THR R:150 , THR R:208 , ARG R:231	BINDING SITE FOR RESIDUE SO4 R 375
07	AC7	SOFTWARE	THR S:179 , ASP S:181 , ARG S:195 , ARG S:231 , NDP S:367	BINDING SITE FOR RESIDUE SO4 S 376
08	AC8	SOFTWARE	SER S:148 , CYS S:149 , THR S:150 , THR S:208 , ARG S:231	BINDING SITE FOR RESIDUE SO4 S 377
09	AC9	SOFTWARE	ASP T:181 , ARG T:231 , TYR T:361 , NDP T:368	BINDING SITE FOR RESIDUE SO4 T 378
10	BC1	SOFTWARE	SER T:148 , CYS T:149 , THR T:150 , THR T:208 , ALA T:210	BINDING SITE FOR RESIDUE SO4 T 379
11	BC2	SOFTWARE	GLU S:253 , ASN S:256 , ARG S:260 , ASP S:275 , SER S:294	BINDING SITE FOR RESIDUE SO4 S 380
12	BC3	SOFTWARE	CYS R:274	BINDING SITE FOR RESIDUE SO4 R 381
13	BC4	SOFTWARE	GLY Q:138 , HIS Q:139 , LYS Q:331	BINDING SITE FOR RESIDUE SO4 Q 382
14	BC5	SOFTWARE	GLU S:276 , THR T:41 , VAL T:57 , LYS T:58 , ILE T:59	BINDING SITE FOR RESIDUE SO4 T 383
15	BC6	SOFTWARE	LYS Q:107 , LYS T:248	BINDING SITE FOR RESIDUE SO4 Q 384
16	BC7	SOFTWARE	PHE O:8 , GLY O:9 , ARG O:10 , ILE O:11 , ASN O:31 , ARG O:77 , GLY O:95 , THR O:96 , GLY O:97 , THR O:119 , CYS O:149 , ASN O:313 , GLU O:314 , TYR O:317 , SO4 O:370	BINDING SITE FOR RESIDUE NDP O 363
17	BC8	SOFTWARE	GLY P:7 , GLY P:9 , ARG P:10 , ILE P:11 , ASN P:31 , ASP P:32 , THR P:33 , ASP P:76 , ARG P:77 , GLY P:95 , GLY P:97 , THR P:119 , ALA P:120 , CYS P:149 , THR P:179 , ASN P:313 , GLU P:314 , TYR P:317 , GLU Q:362	BINDING SITE FOR RESIDUE NDP P 364
18	BC9	SOFTWARE	GLY Q:9 , ARG Q:10 , ILE Q:11 , ARG Q:77 , GLY Q:97 , THR Q:119 , CYS Q:149 , ASN Q:313 , GLU Q:314 , SO4 Q:373	BINDING SITE FOR RESIDUE NDP Q 365
19	CC1	SOFTWARE	GLU O:362 , GLY R:9 , ARG R:10 , ILE R:11 , ASP R:32 , THR R:33 , ARG R:77 , THR R:96 , GLY R:97 , THR R:119 , ALA R:120 , THR R:179 , ASN R:313 , TYR R:317 , SO4 R:374	BINDING SITE FOR RESIDUE NDP R 366
20	CC2	SOFTWARE	GLY S:9 , ARG S:10 , ILE S:11 , ASP S:32 , THR S:33 , ASP S:76 , ARG S:77 , GLY S:95 , GLY S:97 , THR S:119 , ALA S:120 , THR S:179 , ASN S:313 , GLU S:314 , TYR S:317 , SO4 S:376	BINDING SITE FOR RESIDUE NDP S 367
21	CC3	SOFTWARE	GLY T:7 , PHE T:8 , GLY T:9 , ARG T:10 , ILE T:11 , ASN T:31 , ARG T:77 , GLY T:95 , THR T:96 , GLY T:97 , THR T:119 , ALA T:120 , CYS T:149 , ASN T:313 , GLU T:314 , TYR T:317 , SO4 T:378	BINDING SITE FOR RESIDUE NDP T 368

Asymmetric Unit

No.	Residues
1	O:349	-	O:358
2	T:349	-	T:358

(no "Cis Peptide Bond" information available for 2PKQ)

(no "SAP(SNP)/Variant" information available for 2PKQ)

Asymmetric Unit (1, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GAPDH	PS00071	Glyceraldehyde 3-phosphate dehydrogenase active site.	G3PA_SPIOL	216-223	3	P:147-154 R:147-154 S:147-154
1	GAPDH	PS00071	Glyceraldehyde 3-phosphate dehydrogenase active site.	G3PB_SPIOL	236-243	3	O:147-154 Q:147-154 T:147-154

Biological Unit 1 (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GAPDH	PS00071	Glyceraldehyde 3-phosphate dehydrogenase active site.	G3PA_SPIOL	216-223	2	P:147-154 R:147-154 -
1	GAPDH	PS00071	Glyceraldehyde 3-phosphate dehydrogenase active site.	G3PB_SPIOL	236-243	2	O:147-154 Q:147-154 -

Biological Unit 2 (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GAPDH	PS00071	Glyceraldehyde 3-phosphate dehydrogenase active site.	G3PA_SPIOL	216-223	2	- - S:147-154
1	GAPDH	PS00071	Glyceraldehyde 3-phosphate dehydrogenase active site.	G3PB_SPIOL	236-243	2	- - T:147-154

(no "Exon" information available for 2PKQ)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain O from PDB  Type:PROTEIN  Length:346
 aligned with G3PB_SPIOL | P12860 from UniProtKB/Swiss-Prot  Length:451

    Alignment length:368
                                    93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443        
          G3PB_SPIOL     84 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKSATHLLKYDSILGTFKADVKIIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGSDIPTYVVGVNEKDYGHDVANIISNASCTTNCLAPFVKVLDEELGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNIEKVGVTAEDVNNAFRKAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTIDSSLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVANKWPGLEGSVASGDPLEDFCKDNPADEECKLYE  451
               SCOP domains d2pkqo1 O:0-148,O:313-333 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                d2pkqo2 O:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                  d2pkqo1                            --        ----- SCOP domains
               CATH domains 2pkqO01 O:0-147,O:314-348 NAD(P)-binding Rossmann-like Domain                                                                                            2pkqO02 O:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                             2pkqO01 O:0-147,O:31              4-        ----- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee...hhhhhhhhhhhh.....eeeeeee..hhhhhhhhhhhh..........eeee...eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhhh..eeee...........................eee....hhhhhhhhhhhhhh...eeeeeeeeeee.........................ee..hhhhhhhhhhhhhhh.......eee.....eeeeeeeee.....hhhhhhhhhhhhhh........ee....hhhhhh......eee.hhh......eeeeeeee..hhhhhhhhhhhhhhhhhh..--------------..--------..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2pkq O    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKSATHLLKYDSILGTFKADVKIIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGSDIPTYVVGVNEKDYGHDVANIISNASCTTNCLAPFVKVLDEELGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNIEKVGVTAEDVNNAFRKAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTIDSSLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVANKWP--------------FC--------CKLYE  362
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 125       135    |  144       154       164       174       184   ||  195       205       215       225       235       245   |   254       264       274       284       294       304       314       324        |-         -   ||    -   |    
                                             18A|              34|                      60A                                                           122A |             139A                                              188|                                                       248A                                                                                  333            348|      358    
                                              18B               36                                                                                      123A                                                                190                                                                                                                                                             349

Chain P from PDB  Type:PROTEIN  Length:337
 aligned with G3PA_SPIOL | P19866 from UniProtKB/Swiss-Prot  Length:401

    Alignment length:337
                                                                                                                                                                                                                                                                                                                                                                         401 
                                    75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395     | 
          G3PA_SPIOL     66 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ-    -
               SCOP domains d2pkqp1 P:0-148,P:313-332 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d2pkqp2 P:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                 d2pkqp1             -- SCOP domains
               CATH domains -2pkqP01 P:1-147,P:314-333 NAD(P)-binding Rossmann-like Domain                                                                                         2pkqP02 P:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                            2pkqP01             - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhh.....eeeeeee...hhhhhhhhhhh..........ee.....eeee..eeeeee...hhhhh........eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee....hhhhhhhhhhhhhhhhheeeeeeeeeee.........................eeee.hhhhhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhhh.......ee....hhhhhh......eee.hhheee...eeeeeeee..hhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2pkq P    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQA  334
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 126       136       146       156       166       176       186 ||    197       207       217       227       237       247       257       267       277       287       297       307       317       327       
                                             18A|              34|                      60A                                                           122A                                                               188|                                                                                                                                                
                                              18B               36                                                                                                                                                        190

Chain Q from PDB  Type:PROTEIN  Length:347
 aligned with G3PB_SPIOL | P12860 from UniProtKB/Swiss-Prot  Length:451

    Alignment length:368
                                    93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443        
          G3PB_SPIOL     84 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKSATHLLKYDSILGTFKADVKIIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGSDIPTYVVGVNEKDYGHDVANIISNASCTTNCLAPFVKVLDEELGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNIEKVGVTAEDVNNAFRKAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTIDSSLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVANKWPGLEGSVASGDPLEDFCKDNPADEECKLYE  451
               SCOP domains d2pkqq1 Q:0-148,Q:313-333 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                d2pkqq2 Q:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                  d2pkqq1              ---                     ----- SCOP domains
               CATH domains 2pkqQ01 Q:0-147,Q:314-334 NAD(P)-binding Rossmann-like Domain                                                                                            2pkqQ02 Q:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                             2pkqQ01              --                     ----- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee...hhhhhhhhhhhh.....eeeeeee..hhhhhhhhhhhh..........eeee...eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhhh..eeee...........................eee....hhhhhhhhhhhhhh...eeeeeeeeeee.........................ee.......hhhhhhhhhh.......eee.....eeeeeeeee.....hhhhhhhhhhhhhhh.......ee....hhhhhh......eee.hhh......eeeeeeee..hhhhhhhhhhhhhhhhhh.....---------------------..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2pkq Q    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKSATHLLKYDSILGTFKADVKIIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGSDIPTYVVGVNEKDYGHDVANIISNASCTTNCLAPFVKVLDEELGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNIEKVGVTAEDVNNAFRKAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTIDSSLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVANKWPGLE---------------------CKLYE  362
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 125       135    |  144       154       164       174       184   ||  195       205       215       225       235       245   |   254       264       274       284       294       304       314       324       334 |       -         -   |    
                                             18A|              34|                      60A                                                           122A |             139A                                              188|                                                       248A                                                                                     336                   358    
                                              18B               36                                                                                      123A                                                                190

Chain R from PDB  Type:PROTEIN  Length:337
 aligned with G3PA_SPIOL | P19866 from UniProtKB/Swiss-Prot  Length:401

    Alignment length:337
                                                                                                                                                                                                                                                                                                                                                                         401 
                                    75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395     | 
          G3PA_SPIOL     66 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ-    -
               SCOP domains d2pkqr1 R:0-148,R:313-332 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d2pkqr2 R:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                 d2pkqr1             -- SCOP domains
               CATH domains -2pkqR01 R:1-147,R:314-333 NAD(P)-binding Rossmann-like Domain                                                                                         2pkqR02 R:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                            2pkqR01             - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhh.....eeeeeee...hhhhhhhhhhh..........ee.....eeee..eeeeee...hhhhh........eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee....hhhhhhhhhhhhhhhhheeeeeeeeeee.........................eeee.hhhhhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhhh.............hhhhhh......ee.hhhheee...eeeeeeee..hhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2pkq R    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQA  334
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 126       136       146       156       166       176       186 ||    197       207       217       227       237       247       257       267       277       287       297       307       317       327       
                                             18A|              34|                      60A                                                           122A                                                               188|                                                                                                                                                
                                              18B               36                                                                                                                                                        190

Chain S from PDB  Type:PROTEIN  Length:336
 aligned with G3PA_SPIOL | P19866 from UniProtKB/Swiss-Prot  Length:401

    Alignment length:336
                                    75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395      
          G3PA_SPIOL     66 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ  401
               SCOP domains d2pkqs1 S:0-148,S:313-332 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d2pkqs2 S:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                 d2pkqs1             - SCOP domains
               CATH domains -2pkqS01 S:1-147,S:314-333 NAD(P)-binding Rossmann-like Domain                                                                                         2pkqS02 S:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                            2pkqS01              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhh.....eeeeeee...hhhhhhhhhhh..........ee.....eeee..eeeeee...hhhhh........eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee....hhhhhhhhhhhhhhhhheeeeeeeeeee.........................eeee.hhhhhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhhh.......ee....hhhhhh......eee.hhheee...eeeeeeee..hhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                2pkq S    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ  333
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 126       136       146       156       166       176       186 ||    197       207       217       227       237       247       257       267       277       287       297       307       317       327      
                                             18A|              34|                      60A                                                           122A                                                               188|                                                                                                                                               
                                              18B               36                                                                                                                                                        190

Chain T from PDB  Type:PROTEIN  Length:349
 aligned with G3PB_SPIOL | P12860 from UniProtKB/Swiss-Prot  Length:451

    Alignment length:368
                                    93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443        
          G3PB_SPIOL     84 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKSATHLLKYDSILGTFKADVKIIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGSDIPTYVVGVNEKDYGHDVANIISNASCTTNCLAPFVKVLDEELGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNIEKVGVTAEDVNNAFRKAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTIDSSLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVANKWPGLEGSVASGDPLEDFCKDNPADEECKLYE  451
               SCOP domains d2pkqt1 T:0-148,T:313-333 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                d2pkqt2 T:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                  d2pkqt1              ----           -        ----- SCOP domains
               CATH domains 2pkqT01 T:0-147,T:314-336 NAD(P)-binding Rossmann-like Domain                                                                                            2pkqT02 T:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                             2pkqT01                -           -        ----- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee...hhhhhhhhhhhh.....eeeeeee..hhhhhhhhhhhh..........eeee...eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhhh..eeee...........................eee....hhhhhhhhhhhhhh...eeeeeeeeeee.........................ee..hhhhhhhhhhhhhhh.......eee.....eeeeeeeee.....hhhhhhhhhhhhhh........ee....hhhhhh......eee.hhh......eeeeeeee..hhhhhhhhhhhhhhhhhh......-----------.--------..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2pkq T    0 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKSATHLLKYDSILGTFKADVKIIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGSDIPTYVVGVNEKDYGHDVANIISNASCTTNCLAPFVKVLDEELGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNIEKVGVTAEDVNNAFRKAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTIDSSLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVANKWPGLEG-----------C--------CKLYE  362
                                     9       18A|       27      ||38        48        58  |     67        77        87        97       107       117     | 125       135    |  144       154       164       174       184   ||  195       205       215       225       235       245   |   254       264       274       284       294       304       314       324       334  |      -    |    -   |    
                                             18A|              34|                      60A                                                           122A |             139A                                              188|                                                       248A                                                                                      337         349      358    
                                              18B               36                                                                                      123A                                                                190

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: FwdE/GAPDH domain-like (188)

Superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (179)

Family: GAPDH-like (99)

Protein domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (61)

Spinach (Spinacia oleracea) [TaxId: 3562] (8)

1a	d2pkqo2	O:149-312
1b	d2pkqp2	P:149-312
1c	d2pkqq2	Q:149-312
1d	d2pkqr2	R:149-312
1e	d2pkqs2	S:149-312
1f	d2pkqt2	T:149-312

Class: Alpha and beta proteins (a/b) (23833)

Fold: NAD(P)-binding Rossmann-fold domains (1604)

Superfamily: NAD(P)-binding Rossmann-fold domains (1604)

Family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain (179)

Protein domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (61)

Spinach (Spinacia oleracea) [TaxId: 3562] (8)

2a	d2pkqo1	O:0-148,O:313-333
2b	d2pkqp1	P:0-148,P:313-332
2c	d2pkqq1	Q:0-148,Q:313-333
2d	d2pkqr1	R:0-148,R:313-332
2e	d2pkqs1	S:0-148,S:313-332
2f	d2pkqt1	T:0-148,T:313-333

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 2-Layer Sandwich (8480)

Topology: Dihydrodipicolinate Reductase; domain 2 (182)

Homologous Superfamily: Dihydrodipicolinate Reductase; domain 2 (178)

Spinach (Spinacia oleracea) (8)

1a	2pkqP02	P:148-313
1b	2pkqR02	R:148-313
1c	2pkqS02	S:148-313
1d	2pkqO02	O:148-313
1e	2pkqQ02	Q:148-313
1f	2pkqT02	T:148-313

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: NAD(P)-binding Rossmann-like Domain (1244)

Spinach (Spinacia oleracea) (10)

2a	2pkqP01	P:1-147,P:314-333
2b	2pkqR01	R:1-147,R:314-333
2c	2pkqS01	S:1-147,S:314-333
2d	2pkqT01	T:0-147,T:314-336
2e	2pkqO01	O:0-147,O:314-348
2f	2pkqQ01	Q:0-147,Q:314-334

(no "Pfam Domain" information available for 2PKQ)

Asymmetric Unit(hide GO term definitions)

Chain O,Q,T (G3PB_SPIOL | P12860)

molecular function
	GO:0051287	NAD binding	Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
	GO:0050661	NADP binding	Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
	GO:0047100	glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	Catalysis of the reaction: phosphate + NADP+ + glyceraldehyde-3-phosphate = NADPH + 3-phospho-D-glyceroyl-phosphate.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
biological process
	GO:0006006	glucose metabolic process	The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
	GO:0019253	reductive pentose-phosphate cycle	The fixation of carbon dioxide (CO2) as glucose in the chloroplasts of C3 plants; uses ATP and NADPH formed in the light reactions of photosynthesis; carbon dioxide reacts with ribulose 1,5-bisphosphate (catalyzed by the function of ribulose-bisphosphate carboxylase) to yield two molecules of 3-phosphoglycerate; these are then phosphorylated by ATP to 1,3-bisphosphateglyceraldehyde which, in turn, is then reduced by NADPH to glyceraldehyde 3-phosphate. The glyceraldehyde 3-phosphate is converted to fructose 5-phosphate and ribulose 5-phosphate by aldolase and other enzymes; the ribulose 5-phosphate is phosphorylated by ATP to ribulose 1,5-bisphosphate.
cellular component
	GO:0009507	chloroplast	A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
	GO:0009536	plastid	Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.

Chain P,R,S (G3PA_SPIOL | P19866)

molecular function
	GO:0051287	NAD binding	Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
	GO:0050661	NADP binding	Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
	GO:0047100	glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	Catalysis of the reaction: phosphate + NADP+ + glyceraldehyde-3-phosphate = NADPH + 3-phospho-D-glyceroyl-phosphate.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
biological process
	GO:0006006	glucose metabolic process	The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
	GO:0019253	reductive pentose-phosphate cycle	The fixation of carbon dioxide (CO2) as glucose in the chloroplasts of C3 plants; uses ATP and NADPH formed in the light reactions of photosynthesis; carbon dioxide reacts with ribulose 1,5-bisphosphate (catalyzed by the function of ribulose-bisphosphate carboxylase) to yield two molecules of 3-phosphoglycerate; these are then phosphorylated by ATP to 1,3-bisphosphateglyceraldehyde which, in turn, is then reduced by NADPH to glyceraldehyde 3-phosphate. The glyceraldehyde 3-phosphate is converted to fructose 5-phosphate and ribulose 5-phosphate by aldolase and other enzymes; the ribulose 5-phosphate is phosphorylated by ATP to ribulose 1,5-bisphosphate.
cellular component
	GO:0009507	chloroplast	A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
	GO:0009536	plastid	Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		NDP	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		SO4	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]
		AC8	[ RasMol ]	+environment [ RasMol ]
		AC9	[ RasMol ]	+environment [ RasMol ]
		BC1	[ RasMol ]	+environment [ RasMol ]
		BC2	[ RasMol ]	+environment [ RasMol ]
		BC3	[ RasMol ]	+environment [ RasMol ]
		BC4	[ RasMol ]	+environment [ RasMol ]
		BC5	[ RasMol ]	+environment [ RasMol ]
		BC6	[ RasMol ]	+environment [ RasMol ]
		BC7	[ RasMol ]	+environment [ RasMol ]
		BC8	[ RasMol ]	+environment [ RasMol ]
		BC9	[ RasMol ]	+environment [ RasMol ]
		CC1	[ RasMol ]	+environment [ RasMol ]
		CC2	[ RasMol ]	+environment [ RasMol ]
		CC3	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2pkq)

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	2pkq
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	G3PA_SPIOL \| P19866
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt
	G3PB_SPIOL \| P12860
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	1.2.1.13
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	G3PA_SPIOL \| P19866
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)
	G3PB_SPIOL \| P12860
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	G3PA_SPIOL \| P19866	:	1jn0 1nbo 1rm3 1rm4 1rm5 2hki 2pkr

1jn0	CRYSTAL STRUCTURE OF PHOTOSYNTHETIC GLYCERALDEHYDE-3- PHOSPHATE DEHYDROGENASE A4 ISOFORM, COMPLEXED WITH NADP
1nbo	CRYSTAL STRUCTURE OF PHOTOSYNTHETIC GLYCERALDEHYDE-3- PHOSPHATE DEHYDROGENASE A4 ISOFORM, COMPLEXED WITH NAD
1rm3	CRYSTAL STRUCTURE OF MUTANT T33A OF PHOTOSYNTHETIC GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE A4 ISOFORM, COMPLEXED WITH NADP
1rm4	CRYSTAL STRUCTURE OF RECOMBINANT PHOTOSYNTHETIC GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE A4 ISOFORM, COMPLEXED WITH NADP
1rm5	CRYSTAL STRUCTURE OF MUTANT S188A OF PHOTOSYNTHETIC GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE A4 ISOFORM, COMPLEXED WITH NADP
2pkr

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 21)

Sites (21, 21)

SS Bonds (2, 2)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 6)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 12)

CATH Domains (2, 12)

Pfam Domains (0, 0)

Gene Ontology (10, 20)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File