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(-) Description

Title :  SOLUTION STRUCTURE OF HUMAN SUMO1
 
Authors :  M. T. Naik, N. Naik, H. Shih, T. Huang
Date :  24 Apr 15  (Deposition) - 20 Apr 16  (Release) - 20 Apr 16  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Ubiquitin-Like Protein, Structural Genomics (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. T. Naik, N. Naik, H. Shih, T. Huang
Structures Of Human Sumo
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - SMALL UBIQUITIN-RELATED MODIFIER 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector: PCDFDUET-1
    Fragment: UNP RESIDUES 1-97
    Gene: OK/SW-CL.43, SMT3C, SMT3H3, SUMO1, UBL1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Other Details: PLASMID PCDF PYLT-1 WITH SUMO INSERT AND PACKRS-3 AS DESCRIBED IN NEUMANN ET AL., MOL CELL, 36, 153, 2009
    Synonym: SUMO-1, GAP-MODIFYING PROTEIN 1, GMP1, SMT3 HOMOLOG 3, SENTRIN, UBIQUITIN-HOMOLOGY DOMAIN PROTEIN PIC1, UBIQUITIN-LIKE PROTEIN SMT3C, SMT3C, UBIQUITIN-LIKE PROTEIN UBL1

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2N1V)

(-) Sites  (0, 0)

(no "Site" information available for 2N1V)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2N1V)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2N1V)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2N1V)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2N1V)

(-) Exons   (0, 0)

(no "Exon" information available for 2N1V)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:97
                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................eeeeeee.....eeeeeee...hhhhhhhhhhhhhh.....eeeee..ee...............eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------- Transcript
                  2n1v A  1 MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGG 97
                                    10        20        30        40        50        60        70        80        90
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2N1V)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2N1V)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2N1V)

(-) Gene Ontology  (46, 46)

NMR Structure(hide GO term definitions)

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(no "Ligands, Modified Residues, Ions" information available for 2n1v)
 
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  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2n1v)
 

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  2n1v
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  SUMO1_HUMAN | P63165
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  SUMO1_HUMAN | P63165
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SUMO1_HUMAN | P63165: 1a5r 1tgz 1wyw 1y8r 1z5s 2asq 2bf8 2g4d 2io2 2iy0 2iy1 2kqs 2las 2mw5 2n1a 2pe6 2uyz 2vrr 3kyc 3kyd 3rzw 3uip 4wjn 4wjo 4wjp 4wjq 5aek 5b7a 5elj 5ghd

(-) Related Entries Specified in the PDB File

6304
1a5r RELATED ID: 25576 RELATED DB: BMRB
2n1w
2n1x
2n1y
2n1z
2n20