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(-) Description

Title :  CRYSTAL STRUCTURE OF BACTERIAL ADHESIN FADA
 
Authors :  S. Nithianantham, M. Xu, N. Wu, M. Shoham, Y. W. Han
Date :  08 Oct 08  (Deposition) - 02 Dec 08  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A
Keywords :  Antiparallel Helix-Loop-Helix, Leucine Chain, Cell Adhesin, Cell Adhesion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Nithianantham, M. Xu, M. Yamada, A. Ikegami, M. Shoham, Y. W. Han
Crystal Structure Of Fada Adhesin From Fusobacterium Nucleatum Reveals A Novel Oligomerization Motif, The Leucine Chain.
J. Biol. Chem. V. 284 3865 2009
PubMed-ID: 18996848  |  Reference-DOI: 10.1074/JBC.M805503200
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ADHESIN A
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21(B)
    Expression System Strain: BL21
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: FADA
    Organism Scientific: FUSOBACTERIUM NUCLEATUM
    Organism Taxid: 851

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1SCN1Ligand/IonTHIOCYANATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPHE A:29 , ARG A:33 , GLU A:75 , SER A:78 , GLN A:105BINDING SITE FOR RESIDUE SCN A 130

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3ETW)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:109
 aligned with Q5I6B0_FUSNU | Q5I6B0 from UniProtKB/TrEMBL  Length:129

    Alignment length:109
                                                                                                                                     129 
                                    31        41        51        61        71        81        91       101       111       121       | 
         Q5I6B0_FUSNU    22 AASLVGELQALDAEYQNLANQEEARFNEERAQADAARQALAQNEQVYNELSQRAQRLQAEANTRFYKSQYQELASKYEDALKKLEAEMEQQKAVISDFEKIQALRAGN-   -
               SCOP domains ------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 3etw A   4 AASLVGELQALDAEYQNLANQEEARFNEERAQADAARQALAQNEQVYNELSQRAQRLQAEANTRFYKSQYQELASKYEDALKKLEAEMEQQKAVISDFEKIQALRAGNL 112
                                    13        23        33        43        53        63        73        83        93       103
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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        Q5I6B0_FUSNU | Q5I6B0: 2gl2 3etx 3ety 3etz

(-) Related Entries Specified in the PDB File

3etx CRYSTAL STRUCTURE OF BACTERIAL ADHESIN FADA L14A MUTANT
3ety CRYSTAL STRUCTURE OF BACTERIAL ADHESIN FADA L14A MUTANT
3etz CRYSTAL STRUCTURE OF BACTERIAL ADHESIN FADA L76A MUTANT