1W96 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF BIOTIN CARBOXYLASE DOMAIN OF ACETYL-COENZYME A CARBOXYLASE FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH SORAPHEN A

Authors :   Y. Shen, S. L. Volrath, S. C. Weatherly, T. D. Elich, L. Tong

Date :   06 Oct 04 (Deposition) - 04 Jan 05 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.80

Chains :   Asym. Unit : A,B,C
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)

Keywords :   Ligase, Obesity, Diabetes, Fatty Acid Metabolism, Structure-Based Drug Design, Allosteric Inhibition, Polyketide (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Y. Shen, S. L. Volrath, S. C. Weatherly, T. D. Elich, L. Tong
A Mechanism For The Potent Inhibition Of Eukaryotic Acetyl-Coenzyme A Carboxylase By Soraphen A, A Macrocyclic Polyketide Natural Product
Mol. Cell V. 16 881 2004
PubMed-ID: 15610732 | Reference-DOI: 10.1016/J.MOLCEL.2004.11.034

Molecule 1 - ACETYL-COENZYME A CARBOXYLASE
	Chains	:	A, B, C
	EC Number	:	6.4.1.2
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Fragment	:	BIOTIN CARBOXYLASE DOMAIN, RESIDUES 13-566
	Organism Common	:	BAKER'S YEAST
	Organism Scientific	:	SACCHAROMYCES CEREVISIAE
	Organism Taxid	:	4932
	Other Details	:	POLYKETIDE SORAPHEN A
	Synonym	:	ACC

		1	2	3
Asymmetric Unit	:	A	B	C
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 3)

No.	Name	Count	Type	Full Name
1	S1A	3	Ligand/Ion	SORAPHEN A

Biological Unit 1 (1, 1)

No.	Name	Count	Type	Full Name
1	S1A	1	Ligand/Ion	SORAPHEN A

Biological Unit 2 (1, 1)

No.	Name	Count	Type	Full Name
1	S1A	1	Ligand/Ion	SORAPHEN A

Biological Unit 3 (1, 1)

No.	Name	Count	Type	Full Name
1	S1A	1	Ligand/Ion	SORAPHEN A

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	LYS A:73 , ARG A:76 , SER A:77 , GLU A:392 , MET A:393 , ASN A:398 , TRP A:487 , PHE A:510 , HOH A:2453 , HOH A:2454 , ASN B:280	BINDING SITE FOR RESIDUE S1A A1567
2	AC2	SOFTWARE	LYS B:73 , ARG B:76 , SER B:77 , GLU B:392 , MET B:393 , VAL B:397 , ASN B:398 , TRP B:487 , PHE B:510 , HOH B:2508 , HOH B:2509 , HOH B:2510	BINDING SITE FOR RESIDUE S1A B1567
3	AC3	SOFTWARE	LYS C:73 , ARG C:76 , SER C:77 , GLU C:392 , MET C:393 , VAL C:397 , ASN C:398 , TRP C:487 , PHE C:510 , HOH C:2480 , HOH C:2481	BINDING SITE FOR RESIDUE S1A C1550

(no "SS Bond" information available for 1W96)

Asymmetric Unit

No.	Residues
1	Phe A:247	-	Pro A:248
2	Ala A:332	-	Pro A:333
3	Phe B:247	-	Pro B:248
4	Ala B:332	-	Pro B:333
5	Phe C:247	-	Pro C:248
6	Ala C:332	-	Pro C:333

(no "SAP(SNP)/Variant" information available for 1W96)

Asymmetric Unit (3, 9)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	BC	PS50979	Biotin carboxylation domain profile.	ACAC_YEAST	58-567	3	A:58-566 B:58-566 C:58-550
2	CPSASE_1	PS00866	Carbamoyl-phosphate synthase subdomain signature 1.	ACAC_YEAST	247-261	3	A:247-261 B:247-261 C:247-261
3	CPSASE_2	PS00867	Carbamoyl-phosphate synthase subdomain signature 2.	ACAC_YEAST	377-384	3	A:377-384 B:377-384 C:377-384

Biological Unit 1 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	BC	PS50979	Biotin carboxylation domain profile.	ACAC_YEAST	58-567	1	A:58-566 - -
2	CPSASE_1	PS00866	Carbamoyl-phosphate synthase subdomain signature 1.	ACAC_YEAST	247-261	1	A:247-261 - -
3	CPSASE_2	PS00867	Carbamoyl-phosphate synthase subdomain signature 2.	ACAC_YEAST	377-384	1	A:377-384 - -

Biological Unit 2 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	BC	PS50979	Biotin carboxylation domain profile.	ACAC_YEAST	58-567	1	- B:58-566 -
2	CPSASE_1	PS00866	Carbamoyl-phosphate synthase subdomain signature 1.	ACAC_YEAST	247-261	1	- B:247-261 -
3	CPSASE_2	PS00867	Carbamoyl-phosphate synthase subdomain signature 2.	ACAC_YEAST	377-384	1	- B:377-384 -

Biological Unit 3 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	BC	PS50979	Biotin carboxylation domain profile.	ACAC_YEAST	58-567	1	- - C:58-550
2	CPSASE_1	PS00866	Carbamoyl-phosphate synthase subdomain signature 1.	ACAC_YEAST	247-261	1	- - C:247-261
3	CPSASE_2	PS00867	Carbamoyl-phosphate synthase subdomain signature 2.	ACAC_YEAST	377-384	1	- - C:377-384

Asymmetric Unit (1, 3)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	YNR016C	1	YNR016C.1	XIV:661377-654676	6702	ACAC_YEAST	1-2233	2233	3	A:14-566 (gaps) B:13-566 (gaps) C:14-550	553 554 537

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:549
 aligned with ACAC_YEAST | Q00955 from UniProtKB/Swiss-Prot  Length:2233

    Alignment length:553
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563   
           ACAC_YEAST    14 MEYEITNYSERHTELPGHFIGLNTVDKLEESPLRDFVKSHGGHTVISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDLEANAEYIRMADQYIEVPGGTNNNNYANVDLIVDIAERADVDAVWAGWGHASENPLLPEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDEKTGLVSVDDDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEIPGSPIFIMKLAGRARHLEVQLLADQYGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYLYSHDDGKFYFLELNPRLQVEHPTTEMVSGVNLPAAQLQIAMGIPMHRISDIRTLYGMNPHSASEIDFEFKTQDATKKQRRPIPKGHCTACRITSEDPNDGFKPSGGTLHELNFRSSSNVWGYFSVGNNGNIHSFSDSQFGHIFAFGENRQASRKHMVVALKELSIRGDFRTTVEYLIKLLETEDFEDNTITTGWLDDLI 566
               SCOP domains d1w96a2 A:14-183 Acetyl-CoA carboxylase, BC-N subdomain                                                                                                                   d1w96a3 A:184-450 Acetyl-CoA carboxylase, BC-M subdomain                                                                                                                                                                                                                   d1w96a1 A:451-566 Acetyl-CoA carboxylase, BC-C subdomain                                                             SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1w96A03 A:231-293 ATP-grasp fold, A domain                     --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhh....hhhh..hhhhhhhhhh.......eeee..hhhhhhhhhhhhhhhhhhhhh.....eeeeeehhhhhhh.hhhhhhh.eeee....hhhhh..hhhhhhhhhhhh...eee.........hhhhhhhhhh....ee...hhhhhhhh.hhhhhhhhhhhh...............ee......ee.hhhhhhhhh..hhhhhhhhhhhhh..eeeee........eeee.hhhhhhhhhhhhhhhh....eeeee.....eeeeeeeee.....eeeeeeeeeeeee..eeeeeee.....hhhhhhhhhhhhhhhhhhhh..eeeeeeeee......eeeeeee.....hhhhhhhhhh.hhhhhhhhhhh..hhhhhhhhhhhh...............hhhhhhhh.......eeeeeeeeee............eeee.......eeeeeee...........eeeeeeeeee.hhhhhhhhhhhhhhhhh...----.hhhhhhhhhhhhhhh.....hhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) --------------------------------------------BC  PDB: A:58-566 UniProt: 58-567                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       -------------------------------------------------------------------------------------------------------------------CPSASE_2-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
               Transcript 1 Exon 1.1  PDB: A:14-566 (gaps) UniProt: 1-2233 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               Transcript 1
                 1w96 A  14 MEYEITNYSERHTELPGHFIGLNTVDKLEESPLRDFVKSHGGHTVISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDLEANAEYIRMADQYIEVPGGTNNNNYANVDLIVDIAERADVDAVWAGWGHASENPLLPEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDEKTGLVSVDDDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEIPGSPIFIMKLAGRARHLEVQLLADQYGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYLYSHDDGKFYFLELNPRLQVEHPTTEMVSGVNLPAAQLQIAMGIPMHRISDIRTLYGMNPHSASEIDFEFKTQDATKKQRRPIPKGHCTACRITSEDPNDGFKPSGGTLHELNFRSSSNVWGYFSVGNNGNIHSFSDSQFGHIFAFGENRQASRKHMVVALKELSIRG----TVEYLIKLLETEDFEDNTITTGWLDDLI 566
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533|    | 543       553       563   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  534  539

Chain B from PDB  Type:PROTEIN  Length:542
 aligned with ACAC_YEAST | Q00955 from UniProtKB/Swiss-Prot  Length:2233

    Alignment length:554
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562    
           ACAC_YEAST    13 KMEYEITNYSERHTELPGHFIGLNTVDKLEESPLRDFVKSHGGHTVISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDLEANAEYIRMADQYIEVPGGTNNNNYANVDLIVDIAERADVDAVWAGWGHASENPLLPEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDEKTGLVSVDDDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEIPGSPIFIMKLAGRARHLEVQLLADQYGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYLYSHDDGKFYFLELNPRLQVEHPTTEMVSGVNLPAAQLQIAMGIPMHRISDIRTLYGMNPHSASEIDFEFKTQDATKKQRRPIPKGHCTACRITSEDPNDGFKPSGGTLHELNFRSSSNVWGYFSVGNNGNIHSFSDSQFGHIFAFGENRQASRKHMVVALKELSIRGDFRTTVEYLIKLLETEDFEDNTITTGWLDDLI 566
               SCOP domains -d1w96b2 B:14-183 Acetyl-CoA carboxylase, BC-N subdomain                                                                                                                   d1w96b3 B:184-450 Acetyl-CoA carboxylase, BC-M subdomain                                                                                                                                                                                                                   d1w96b1 B:            451-566 Acetyl-CoA carboxylase, BC-C subdomain                                                 SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1w96B03 B:231-293 ATP-grasp fold, A domain                     --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhh..........hhhhhhhhhh.......eeee..hhhhhhhhhhhhhhhhhhhhh.....eeeeeehhhhhhh.hhhhhhh.eeee....hhhhh..hhhhhhhhhhhh...eee.........hhhhhhhhhh....ee...hhhhhhhh.hhhhhhhhhhhh...............ee......ee.hhhhhhhhh..hhhhhhhhhhhhh..eeeee........eeee.hhhhhhhhhhhhhhhh....eeeee.....eeeeeeeee.....eeeeeeeeeeeee..eeeeeee.....hhhhhhhhhhhhhhhhhhhh..eeeeeeeeee....eeeeeeee......hhhhhhhhh.hhhhhhhhhhh..hhhhhhhhhhhh...............hhhhhhhh.......eeeeeee.------------..eee........eeeeee..............eeeeeeee.hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh....hhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ---------------------------------------------BC  PDB: B:58-566 UniProt: 58-567                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             PROSITE (1)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       -------------------------------------------------------------------------------------------------------------------CPSASE_2-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
               Transcript 1 Exon 1.1  PDB: B:13-566 (gaps) UniProt: 1-2233 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                Transcript 1
                 1w96 B  13 KMEYEITNYSERHTELPGHFIGLNTVDKLEESPLRDFVKSHGGHTVISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDLEANAEYIRMADQYIEVPGGTNNNNYANVDLIVDIAERADVDAVWAGWGHASENPLLPEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDEKTGLVSVDDDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEIPGSPIFIMKLAGRARHLEVQLLADQYGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYLYSHDDGKFYFLELNPRLQVEHPTTEMVSGVNLPAAQLQIAMGIPMHRISDIRTLYGMNPHSASEIDFEFKTQDATKKQRRPIPKGHCTACRIT------------GTLHELNFRSSSNVWGYFSVGNNGNIHSFSDSQFGHIFAFGENRQASRKHMVVALKELSIRGDFRTTVEYLIKLLETEDFEDNTITTGWLDDLI 566
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       | -         -|      482       492       502       512       522       532       542       552       562    
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         460          473

Chain C from PDB  Type:PROTEIN  Length:537
 aligned with ACAC_YEAST | Q00955 from UniProtKB/Swiss-Prot  Length:2233

    Alignment length:537
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       
           ACAC_YEAST    14 MEYEITNYSERHTELPGHFIGLNTVDKLEESPLRDFVKSHGGHTVISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDLEANAEYIRMADQYIEVPGGTNNNNYANVDLIVDIAERADVDAVWAGWGHASENPLLPEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDEKTGLVSVDDDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEIPGSPIFIMKLAGRARHLEVQLLADQYGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYLYSHDDGKFYFLELNPRLQVEHPTTEMVSGVNLPAAQLQIAMGIPMHRISDIRTLYGMNPHSASEIDFEFKTQDATKKQRRPIPKGHCTACRITSEDPNDGFKPSGGTLHELNFRSSSNVWGYFSVGNNGNIHSFSDSQFGHIFAFGENRQASRKHMVVALKELSIRGDFRTTVEYLIKLLETE 550
               SCOP domains d1w96c2 C:14-183 Acetyl-CoA carboxylase, BC-N subdomain                                                                                                                   d1w96c3 C:184-450 Acetyl-CoA carboxylase, BC-M subdomain                                                                                                                                                                                                                   d1w96c1 C:451-549 Acetyl-CoA carboxylase, BC-C subdomain                                           - SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1w96C03 C:231-293 ATP-grasp fold, A domain                     ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) --------------------------------------------CPSase_L_chain-1w96C07 C:58-180                                                                                            ---------------------------------------CPSase_L_D2-1w96C01 C:220-415                                                                                                                                                                       ----------------------------------------Biotin_carb_C-1w96C04 C:456-550                                                                 Pfam domains (1)
           Pfam domains (2) --------------------------------------------CPSase_L_chain-1w96C08 C:58-180                                                                                            ---------------------------------------CPSase_L_D2-1w96C02 C:220-415                                                                                                                                                                       ----------------------------------------Biotin_carb_C-1w96C05 C:456-550                                                                 Pfam domains (2)
           Pfam domains (3) --------------------------------------------CPSase_L_chain-1w96C09 C:58-180                                                                                            ---------------------------------------CPSase_L_D2-1w96C03 C:220-415                                                                                                                                                                       ----------------------------------------Biotin_carb_C-1w96C06 C:456-550                                                                 Pfam domains (3)
         Sec.struct. author .......hhhhhhh.hhhhh....hhhh..hhhhhhhhhh.......eeee..hhhhhhhhhhhhhhhhhhhhh.....eeeeeehhhhhhh.hhhhhhh.eeee....hhhhh..hhhhhhhhhhhh...eee.........hhhhhhhhhh....ee...hhhhhhh..hhhhhhhhhhhh...............ee......ee.hhhhhhhhh..hhhhhhhhhhhhh..eeeee........eeee.hhhhhhhhhhhhhhhh....eeeee.....eeeeeeeee.....eeeeeeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhhhhh..eeeeeeeeee....eeeeeeee......hhhhhhhhh.hhhhhhhhhhh..hhhhhhhhhhhh.................hhhhhh.......eeeeeeeeee.............eee.......eeeeeee...........eeeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) --------------------------------------------BC  PDB: C:58-550 UniProt: 58-567                                                                                                                                                                                                                                                                                                                                                                                                                                                                             PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       -------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
               Transcript 1 Exon 1.1  PDB: C:14-550 UniProt: 1-2233 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      Transcript 1
                 1w96 C  14 MEYEITNYSERHTELPGHFIGLNTVDKLEESPLRDFVKSHGGHTVISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDLEANAEYIRMADQYIEVPGGTNNNNYANVDLIVDIAERADVDAVWAGWGHASENPLLPEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDEKTGLVSVDDDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEIPGSPIFIMKLAGRARHLEVQLLADQYGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYLYSHDDGKFYFLELNPRLQVEHPTTEMVSGVNLPAAQLQIAMGIPMHRISDIRTLYGMNPHSASEIDFEFKTQDATKKQRRPIPKGHCTACRITSEDPNDGFKPSGGTLHELNFRSSSNVWGYFSVGNNGNIHSFSDSQFGHIFAFGENRQASRKHMVVALKELSIRGDFRTTVEYLIKLLETE 550
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 2-Layer Sandwich (8480)

Topology: Dna Ligase; domain 1 (375)

Homologous Superfamily: ATP-grasp fold, A domain (109)

Baker's yeast (Saccharomyces cerevisiae) (2)

1a	1w96A03	A:231-293
1b	1w96B03	B:231-293
1c	1w96C03	C:231-293

Asymmetric Unit(hide GO term definitions)

Chain A,B,C (ACAC_YEAST | Q00955)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0003989	acetyl-CoA carboxylase activity	Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA.
	GO:0004075	biotin carboxylase activity	Catalysis of the reaction: ATP + biotin-carboxyl-carrier protein + CO2 = ADP + phosphate + carboxybiotin-carboxyl-carrier protein.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0016874	ligase activity	Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
	GO:0006633	fatty acid biosynthetic process	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
	GO:0006631	fatty acid metabolic process	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
	GO:0006629	lipid metabolic process	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
	GO:0042759	long-chain fatty acid biosynthetic process	The chemical reactions and pathways resulting in the formation of long-chain fatty acids, any fatty acid with a chain length between C13 and C22.
	GO:2001295	malonyl-CoA biosynthetic process	The chemical reactions and pathways resulting in the formation of malonyl-CoA, the S-malonyl derivative of coenzyme A.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0006998	nuclear envelope organization	A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear envelope.
	GO:0006606	protein import into nucleus	The directed movement of a protein from the cytoplasm to the nucleus.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005783	endoplasmic reticulum	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
	GO:0005789	endoplasmic reticulum membrane	The lipid bilayer surrounding the endoplasmic reticulum.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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1od2	ACETYL-COA CARBOXYLASE CARBOXYLTRANSFERAS DOMAINE
1od4	ACETYL-COA CARBOXYLASE CARBOXYLTRANSFERASE DOMAIN
1uyr	ACETYL-COA CARBOXYLASE CARBOXYLTRANSFERASE DOMAIN IN COMPLEX WITH INHIBITOR DICLOFOP
1uys	ACETYL-COA CARBOXYLASE CARBOXYLTRANSFERASE DOMAIN IN COMPLEX WITH INHIBITOR HALOXYFOP
1uyt	ACETYL-COA CARBOXYLASE CARBOXYLTRANSFERASE DOMAIN
1uyv	ACETYL-COA CARBOXYLASE CARBOXYLTRANSFERASE DOMAIN L1705I/V1967I MUTANT
1w2x	CRYSTAL STRUCTURE OF THE CARBOXYLTRANSFERASE DOMAIN OF ACETYL-COENZYME A CARBOXYLASE IN COMPLEX WITH CP-640186
1w93	CRYSTAL STRUCTURE OF BIOTIN CARBOXYLASE DOMAIN OF ACETYL-COENZYME A CARBOXYLASE FROM SACCHAROMYCES CEREVISIAE

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 3)

Sites (3, 3)

SS Bonds (0, 0)

Cis Peptide Bonds (6, 6)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (3, 9)

Exons (1, 3)

Sequences/Alignments

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SCOP Domains (3, 9)

CATH Domains (1, 3)

Pfam Domains (3, 9)

Gene Ontology (19, 19)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File