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(-) Description

Title :  ACETYL-COA CARBOXYLASE CARBOXYLTRANSFERASE DOMAIN
 
Authors :  H. Zhang, Z. Yang, Y. Shen, L. Tong
Date :  12 Feb 03  (Deposition) - 03 Apr 03  (Release) - 05 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym. Unit :  A,B,C
Biol. Unit 1:  A  (2x)
Biol. Unit 2:  B,C  (1x)
Keywords :  Acc, Acetyl-Coa Carboxylase, Obesity, Ligase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Zhang, Z. Yang, Y. Shen, L. Tong
Crystal Structure Of The Carboxyltransferase Domain Of Acetyl-Coenzyme A Carboxylase
Science V. 299 2064 2003
PubMed-ID: 12663926  |  Reference-DOI: 10.1126/SCIENCE.1081366

(-) Compounds

Molecule 1 - ACETYL-COENZYME A CARBOXYLASE
    Chains: A, B, C
    EC Number: 6.4.1.2
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: CARBOXYLTRANSFERASE DOMAIN, RESIDUES 1429-2233
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: ACC

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit : ABC
Biological Unit 1 (2x): A  
Biological Unit 2 (1x):  BC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 52)

Asymmetric Unit (2, 52)
No.NameCountTypeFull Name
1ADE1Ligand/IonADENINE
2MSE51Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 34)
No.NameCountTypeFull Name
1ADE-1Ligand/IonADENINE
2MSE34Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (2, 35)
No.NameCountTypeFull Name
1ADE1Ligand/IonADENINE
2MSE34Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE C:1593 , SER C:1595 , SER C:1625 , ALA C:1627 , ARG C:1628 , ILE C:1629BINDING SITE FOR RESIDUE ADE C3196

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1OD4)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1OD4)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1OD4)

(-) PROSITE Motifs  (2, 5)

Asymmetric Unit (2, 5)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COA_CT_NTERPS50980 Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile.ACAC_YEAST1486-1822
 		  2A:1486-1822
B:1486-1822
2COA_CT_CTERPS50989 Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile.ACAC_YEAST1826-2141
 
 		  3A:1826-2141
B:1826-2141
C:1826-2141
Biological Unit 1 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COA_CT_NTERPS50980 Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile.ACAC_YEAST1486-1822
 		  2A:1486-1822
-
2COA_CT_CTERPS50989 Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile.ACAC_YEAST1826-2141
 
 		  2A:1826-2141
-
-
Biological Unit 2 (2, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COA_CT_NTERPS50980 Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile.ACAC_YEAST1486-1822
 		  1-
B:1486-1822
2COA_CT_CTERPS50989 Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile.ACAC_YEAST1826-2141
 
 		  2-
B:1826-2141
C:1826-2141

(-) Exons   (1, 3)

Asymmetric Unit (1, 3)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1YNR016C1YNR016C.1XIV:661377-6546766702ACAC_YEAST1-223322333A:1480-2196 (gaps)
B:1480-2196 (gaps)
C:1492-2196 (gaps)		717
717
705

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:684
 aligned with ACAC_YEAST | Q00955 from UniProtKB/Swiss-Prot  Length:2233

    Alignment length:717
                                  1489      1499      1509      1519      1529      1539      1549      1559      1569      1579      1589      1599      1609      1619      1629      1639      1649      1659      1669      1679      1689      1699      1709      1719      1729      1739      1749      1759      1769      1779      1789      1799      1809      1819      1829      1839      1849      1859      1869      1879      1889      1899      1909      1919      1929      1939      1949      1959      1969      1979      1989      1999      2009      2019      2029      2039      2049      2059      2069      2079      2089      2099      2109      2119      2129      2139      2149      2159      2169      2179      2189       
          ACAC_YEAST   1480 LRPIATPYPVKEWLQPKRYKAHLMGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFISNELIEDENGELTEVEREPGANAIGMVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKMLGREVYTSNLQLGGTQIMYNNGVSHLTAVDDLAGVEKIVEWMSYVPAKRNMPVPILETKDTWDRPVDFTPTNDETYDVRWMIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRLDDKYRELRSQLSNKSLAPEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLRRRLNEEYLIKRLSHQVGEASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGLKLESFAQ 2196
               SCOP domains d1od4a1 A:1480-1814 Acetyl-coenzyme A carboxylase                                                                                                                                                                                                                                                                                              d1od4a2 A:1815-2196 Acetyl-coenzyme A carboxylase                                                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 1od4A01 A:1480-1629,A:1699-1814 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                              ---------------------------------------------------------------------1od4A01 A:1480-1629,A:1699-1814 2-enoyl-CoA Hydratase; Chain A, domain 1                                            1od4A03 A:1815-2192 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                                                                                                                                                                                              ---- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh.....hhh.eeeeeeee.....eeee..........eeeeeeee........eeeeeeee...hhhhh.hhhhhhhhhhhhhhhhhhh..eeeee.........hhhhh....................eehhhhhhhhhhh.hhh.eeeee........eeeeee.......hhhhhhhhhhhhhhhhhhhh...eeeee...eehhhhhhhhhh..eeee....ee..hhhhhhhhhh.....hhhhhhhhhhhh......eee.hhhhhhhhhhhhhh.................................hhhhhhhheee..eee.........eee.......eeeeeeee..eeeeeeee....eeeee...........eeeee...eehhhhhhhhhhhhhhhhhh....eee.....ee..hhhhhhhhhhhhhhhhhhhhhhh...eeeee....eeehhhhhhhhhhhhh..eeeeee...eee..hhhhhhhhhhhhhhhhhhhhh.---------------------------------.hhhhhhhhhhhhhhh..hhhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------COA_CT_NTER  PDB: A:1486-1822 UniProt: 1486-1822                                                                                                                                                                                                                                                                                                 ---COA_CT_CTER  PDB: A:1826-2141 UniProt: 1826-2141                                                                                                                                                                                                                                                                            ------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: A:1480-2196 (gaps) UniProt: 1-2233 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                Transcript 1
                1od4 A 1480 LRPIATPYPVKEWLQPKRYKAHLmGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFISNELIEDENGELTEVEREPGANAIGmVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGmAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGmETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKmLGREVYTSNLQLGGTQImYNNGVSHLTAVDDLAGVEKIVEWmSYVPAKRNmPVPILETKDTWDRPVDFTPTNDETYDVRWmIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPmmILANWRGFSGGQRDmFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQmEmYADVNARAGVLEPQGmVGIKFRREKLLDTmNRL---------------------------------ELLPIYGQISLQFADLHDRSSRmVAKGVISKELEWTEARRFFFWRLRRRLNEEYLIKRLSHQVGEASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGLKLESFAQ 2196
                                  1489      1499   |  1509      1519      1529      1539      1549      1559    | 1569      1579      1589      1599      1609      1619      1629 |    1639      1649      1659   |  1669      1679      1689      1699      1709      1719      1729      1739      1749      1759     |1769      1779   |  1789      1799      1809      1819      1829      1839      1849      1859      1869      1879      1889      1899      1909      1919      1929      1939      1949      1959   |  1969      1979      1989      1999      2009  | | 2019      2029|     2039    |  | -         -         -         - |    2089      2099   |  2109      2119      2129      2139      2149      2159      2169      2179      2189       
                                                1503-MSE                                                     1564-MSE                                                           1631-MSE                        1663-MSE                                                                                              1765-MSE          1783-MSE                1807-MSE 1816-MSE                      1846-MSE                                                                                             1947-MSE        1963-MSE                                         2012-MSE          2030-MSE      2044-MSE                             2081                  2103-MSE                                                                                         
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             1948-MSE                                                          2014-MSE                         2047                                                                                                                                                     


Chain B from PDB  Type:PROTEIN  Length:684
 aligned with ACAC_YEAST | Q00955 from UniProtKB/Swiss-Prot  Length:2233

    Alignment length:717
                                  1489      1499      1509      1519      1529      1539      1549      1559      1569      1579      1589      1599      1609      1619      1629      1639      1649      1659      1669      1679      1689      1699      1709      1719      1729      1739      1749      1759      1769      1779      1789      1799      1809      1819      1829      1839      1849      1859      1869      1879      1889      1899      1909      1919      1929      1939      1949      1959      1969      1979      1989      1999      2009      2019      2029      2039      2049      2059      2069      2079      2089      2099      2109      2119      2129      2139      2149      2159      2169      2179      2189       
          ACAC_YEAST   1480 LRPIATPYPVKEWLQPKRYKAHLMGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFISNELIEDENGELTEVEREPGANAIGMVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKMLGREVYTSNLQLGGTQIMYNNGVSHLTAVDDLAGVEKIVEWMSYVPAKRNMPVPILETKDTWDRPVDFTPTNDETYDVRWMIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRLDDKYRELRSQLSNKSLAPEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLRRRLNEEYLIKRLSHQVGEASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGLKLESFAQ 2196
               SCOP domains d1od4b1 B:1480-1814 Acetyl-coenzyme A carboxylase                                                                                                                                                                                                                                                                                              d1od4b2 B:1815-2196 Acetyl-coenzyme A carboxylase                                                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 1od4B01 B:1480-1629,B:1699-1814 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                              ---------------------------------------------------------------------1od4B01 B:1480-1629,B:1699-1814 2-enoyl-CoA Hydratase; Chain A, domain 1                                            1od4B03 B:1815-2192 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                                                                                                                                                                                              ---- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh........eeeeeeee.....eeee..........eeeeeeeeee..eeeeeeeeeeee...hhhhh.hhhhhhhhhhhhhhhhhhh..eeeee.........hhhhh...eeee.........eeeeeehhhhhhhhhhhhhhh.eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhh.eeeee...eehhhhhhhhhh..eeee....ee..hhhhhhhhhh.....hhhhhhhhhhhh......eee.hhhhhhhhhhhhhh.................................hhhhhhhh.................eee.......eeeeeeee..eeeeeeee....eeeee...........eeeee...eehhhhhhhhhhhhhhhhhh....eee.....ee..hhhhhhhhhhhhhhhhhhhhhhh...eeeee....eeehhhhh..hhhhhh..eeeeee...eee..hhhhhhhhhh..hhhhhhhhhh---------------------------------.hhhhhhhhhhhhhhh..hhhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh.........hhhhhhhhhhhh...hhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------COA_CT_NTER  PDB: B:1486-1822 UniProt: 1486-1822                                                                                                                                                                                                                                                                                                 ---COA_CT_CTER  PDB: B:1826-2141 UniProt: 1826-2141                                                                                                                                                                                                                                                                            ------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: B:1480-2196 (gaps) UniProt: 1-2233 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                Transcript 1
                1od4 B 1480 LRPIATPYPVKEWLQPKRYKAHLmGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFISNELIEDENGELTEVEREPGANAIGmVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGmAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGmETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKmLGREVYTSNLQLGGTQImYNNGVSHLTAVDDLAGVEKIVEWmSYVPAKRNmPVPILETKDTWDRPVDFTPTNDETYDVRWmIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPmmILANWRGFSGGQRDmFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQmEmYADVNARAGVLEPQGmVGIKFRREKLLDTmNRL---------------------------------ELLPIYGQISLQFADLHDRSSRmVAKGVISKELEWTEARRFFFWRLRRRLNEEYLIKRLSHQVGEASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGLKLESFAQ 2196
                                  1489      1499   |  1509      1519      1529      1539      1549      1559    | 1569      1579      1589      1599      1609      1619      1629 |    1639      1649      1659   |  1669      1679      1689      1699      1709      1719      1729      1739      1749      1759     |1769      1779   |  1789      1799      1809      1819      1829      1839      1849      1859      1869      1879      1889      1899      1909      1919      1929      1939      1949      1959   |  1969      1979      1989      1999      2009  | | 2019      2029|     2039    |  | -         -         -         - |    2089      2099   |  2109      2119      2129      2139      2149      2159      2169      2179      2189       
                                                1503-MSE                                                     1564-MSE                                                           1631-MSE                        1663-MSE                                                                                              1765-MSE          1783-MSE                1807-MSE 1816-MSE                      1846-MSE                                                                                             1947-MSE        1963-MSE                                         2012-MSE          2030-MSE      2044-MSE                             2081                  2103-MSE                                                                                         
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             1948-MSE                                                          2014-MSE                         2047                                                                                                                                                     


Chain C from PDB  Type:PROTEIN  Length:672
 aligned with ACAC_YEAST | Q00955 from UniProtKB/Swiss-Prot  Length:2233

    Alignment length:705
                                  1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621      1631      1641      1651      1661      1671      1681      1691      1701      1711      1721      1731      1741      1751      1761      1771      1781      1791      1801      1811      1821      1831      1841      1851      1861      1871      1881      1891      1901      1911      1921      1931      1941      1951      1961      1971      1981      1991      2001      2011      2021      2031      2041      2051      2061      2071      2081      2091      2101      2111      2121      2131      2141      2151      2161      2171      2181      2191     
          ACAC_YEAST   1492 WLQPKRYKAHLMGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFISNELIEDENGELTEVEREPGANAIGMVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKMLGREVYTSNLQLGGTQIMYNNGVSHLTAVDDLAGVEKIVEWMSYVPAKRNMPVPILETKDTWDRPVDFTPTNDETYDVRWMIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRLDDKYRELRSQLSNKSLAPEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLRRRLNEEYLIKRLSHQVGEASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGLKLESFAQ 2196
               SCOP domains d1od4c1 C:1492-1814 Acetyl-coenzyme A carboxylase                                                                                                                                                                                                                                                                                  d1od4c2 C:1815-2196 Acetyl-coenzyme A carboxylase                                                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 1od4C01 C:1492-1629,C:1699-1814 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                  ---------------------------------------------------------------------1od4C01 C:1492-1629,C:1699-1814 2-enoyl-CoA Hydratase; Chain A, domain 1                                            1od4C03 C:1815-2192 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                                                                                                                                                                                              ---- CATH domains
           Pfam domains (1) ----------------------------------------------------------------------------------Carboxyl_trans-1od4C01 C:1574-2130                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ------------------------------------------------------------------ Pfam domains (1)
           Pfam domains (2) ----------------------------------------------------------------------------------Carboxyl_trans-1od4C02 C:1574-2130                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ------------------------------------------------------------------ Pfam domains (2)
           Pfam domains (3) ----------------------------------------------------------------------------------Carboxyl_trans-1od4C03 C:1574-2130                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ------------------------------------------------------------------ Pfam domains (3)
         Sec.struct. author .hhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh.....hhh.eeeeeeee.....eeee..........eeeeeeee........eeeeeeee...hhhhh.hhhhhhhhhhhhhhhhhhh..eeeee..................................eehhhhhhhhhhhh....eeeeee......eeeeeee.......hhhhhhhhhhhhhhhhhhhh...eeeee...eehhhhhhhhhh..eeee....ee..hhhhhhhhhh......hhhhhhhhhhhhhh...eee.hhhhhhhhhhhhhhhh...............................hhhhhhhh.................ee........eeeeeeee..eeeeeeee....eeeee...........eeeee...eehhhhhhhhhhhhhhhhhh....eee.....ee..hhhhhhhhhhhhhhhhhhhhhhh...eeeee....eeehhhhhhhhhhhhh..eeeeee...eee..hhhhhhhhhhhhhhhhhhhh..---------------------------------.hhhhhhhhhhhhhhh..hhhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE COA_CT_NTER  PDB: - UniProt: 1486-1822                                                                                                                                                                                                                                                                                                     ---COA_CT_CTER  PDB: C:1826-2141 UniProt: 1826-2141                                                                                                                                                                                                                                                                            ------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: C:1492-2196 (gaps) UniProt: 1-2233 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    Transcript 1
                1od4 C 1492 WLQPKRYKAHLmGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFISNELIEDENGELTEVEREPGANAIGmVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGmAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGmETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKmLGREVYTSNLQLGGTQImYNNGVSHLTAVDDLAGVEKIVEWmSYVPAKRNmPVPILETKDTWDRPVDFTPTNDETYDVRWmIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPmmILANWRGFSGGQRDmFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQmEmYADVNARAGVLEPQGmVGIKFRREKLLDTmNRL---------------------------------ELLPIYGQISLQFADLHDRSSRmVAKGVISKELEWTEARRFFFWRLRRRLNEEYLIKRLSHQVGEASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGLKLESFAQ 2196
                                  1501 |    1511      1521      1531      1541      1551      1561  |   1571      1581      1591      1601      1611      1621      1631      1641      1651      1661 |    1671      1681      1691      1701      1711      1721      1731      1741      1751      1761   |  1771      1781 |    1791      1801     |1811    | 1821      1831      1841    | 1851      1861      1871      1881      1891      1901      1911      1921      1931      1941     |1951      1961 |    1971      1981      1991      2001      2011| |   2021      2031      2041  |  |   -         -         -      2081      2091      2101 |    2111      2121      2131      2141      2151      2161      2171      2181      2191     
                                    1503-MSE                                                     1564-MSE                                                           1631-MSE                        1663-MSE                                                                                              1765-MSE          1783-MSE                1807-MSE 1816-MSE                      1846-MSE                                                                                             1947-MSE        1963-MSE                                         2012-MSE          2030-MSE      2044-MSE                             2081                  2103-MSE                                                                                         
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 1948-MSE                                                          2014-MSE                         2047
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 6)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: Alpha-Beta Complex (3881)
(-)
Topology: 2-enoyl-CoA Hydratase; Chain A, domain 1 (89)
(-)
Homologous Superfamily: 2-enoyl-CoA Hydratase; Chain A, domain 1 (89)
(-)
Baker's yeast (Saccharomyces cerevisiae) (10)
1a1od4C01C:1492-1629,C:1699-1814
1b1od4A01A:1480-1629,A:1699-1814
1c1od4B01B:1480-1629,B:1699-1814
1d1od4A03A:1815-2192
1e1od4B03B:1815-2192
1f1od4C03C:1815-2192

(-) Pfam Domains  (1, 3)

Asymmetric Unit
(-)
Clan: ClpP_crotonase (88)

(-) Gene Ontology  (19, 19)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C   (ACAC_YEAST | Q00955)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0003989    acetyl-CoA carboxylase activity    Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA.
    GO:0004075    biotin carboxylase activity    Catalysis of the reaction: ATP + biotin-carboxyl-carrier protein + CO2 = ADP + phosphate + carboxybiotin-carboxyl-carrier protein.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0006633    fatty acid biosynthetic process    The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
    GO:0006631    fatty acid metabolic process    The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
    GO:0006629    lipid metabolic process    The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
    GO:0042759    long-chain fatty acid biosynthetic process    The chemical reactions and pathways resulting in the formation of long-chain fatty acids, any fatty acid with a chain length between C13 and C22.
    GO:2001295    malonyl-CoA biosynthetic process    The chemical reactions and pathways resulting in the formation of malonyl-CoA, the S-malonyl derivative of coenzyme A.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0006998    nuclear envelope organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear envelope.
    GO:0006606    protein import into nucleus    The directed movement of a protein from the cytoplasm to the nucleus.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005783    endoplasmic reticulum    The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
    GO:0005789    endoplasmic reticulum membrane    The lipid bilayer surrounding the endoplasmic reticulum.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ACAC_YEAST | Q00955: 1od2 1uyr 1uys 1uyt 1uyv 1w2x 1w93 1w96 3h0j 3h0q 3h0s 3k8x 3pgq 3tv5 3tvu 3tvw 3tz3 4wyo 4wz8 5cs0 5cs4 5csa 5csk 5csl 5ctb 5ctc 5cte 5i6e 5trc

(-) Related Entries Specified in the PDB File

1od2 ACETYL-COA CARBOXYLASE CARBOXYLTRANSFERASE DOMAIN