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(-) Description

Title :  CRYSTAL STRUCTURE OF THE CENTRAL DOMAIN OF YEAST ACETYL-COA CARBOXYLASE
 
Authors :  M. Hunkeler, E. Stuttfeld, A. Hagmann, S. Imseng, T. Maier
Date :  16 Feb 16  (Deposition) - 20 Apr 16  (Release) - 28 Sep 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym./Biol. Unit :  A
Keywords :  Carboxylase, Fatty Acid Metabolism, Multienzyme, Carrier Protein- Dependent Enzyme, Ligase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Hunkeler, E. Stuttfeld, A. Hagmann, S. Imseng, T. Maier
The Dynamic Organization Of Fungal Acetyl-Coa Carboxylase.
Nat Commun V. 7 11196 2016
PubMed-ID: 27073141  |  Reference-DOI: 10.1038/NCOMMS11196

(-) Compounds

Molecule 1 - ACETYL-COA CARBOXYLASE
    Chains: A
    EC Number: 6.4.1.2, 6.3.4.14
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Cell Line: SF21
    Expression System Common: FALL ARMYWORM
    Expression System Taxid: 7108
    Fragment: UNP RESIDUES 768-1494
    Gene: ACC1, ABP2, FAS3, MTR7, YNR016C, N3175
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE S288C
    Organism Taxid: 559292
    Synonym: ACC,FATTY ACID SYNTHETASE 3,MRNA TRANSPORT-DEFECTIVE PROTEIN 7

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1MLI1Ligand/IonMALONATE ION
2SEP1Mod. Amino AcidPHOSPHOSERINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL A:1082 , PHE A:1083 , ARG A:1108 , ARG A:1111 , TYR A:1272 , GLN A:1299 , ARG A:1343 , ILE A:1390binding site for residue MLI A 1501

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5I6E)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5I6E)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5I6E)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5I6E)

(-) Exons   (0, 0)

(no "Exon" information available for 5I6E)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:687
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh..hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhh....hhhhhhhhh...hhhhhhhhhhhhhhhhh...eeeeeeee......eeeeeee..hhhhh............................eeeeeeeeee..hhhhhhhhhh............eeeeeeeee.....hhhhhhhhhhhhhhhhhhhhh...eeeeeeee........eeeeee....ee.hhhh..hhhhhhhh.......eeeeee......eeeeeeee......eeeeeeeee.........hhhhhhhhhhhhhhhhhhhhhhhh.......eeeeeeeeeee..hhhhhhhhh......hhhhhhhh.eeeeeeeeeee......eeeeeeeee.......eeeeee.ee.....ee........................ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5i6e A  790 SPVIEGTKPAYKFKSLVSTLENILKGYDNQVIMNASLQQLIEVLRNPKLPYSEWKLHISALHSRLPAKLDEQMEELVARSLRRGAVFPARQLSKLIDMAVKNPEYNPDKLLGAVVEPLADIAHKYSNGLEAHEHSIFVHFLEEYYEVEKLFNGPNVREENIILKLRDENPKDLDKVALTVLSHSKVSAKNNLILAILKHYQPLCKLSSKVSAIFSTPLQHIVELESKATAKVALQAREILIQGALPSVKERTEQIEHILKSSVVKVAYGSSNPKRSEPDLNILKDLIDSNYVVFDVLLQFLTHQDPVVTAAAAQVYIRRAYRAYTIGDIRVHEGVTVPIVEWKFQLPSAAFSTFPTVMGMNRAVsVSDLSYVANSQSSPLREGILMAVDHLDDVDEILSQSLEVIPRHQSASLSNVANVCVASTEGFESEEEILVRLREILDLNKQELINASIRRITFMFGFKDGSYPKYYTFNGPNYNENETIRHIEPALAFQLELGRLSNFNIKPIFTDNRNIHVYEAVSKTSPLDKRFFTRGIIRTGHIRDDISIQEYLTSEANRLMSDILDNLEVTDTSNSDLNHIFINFIAVFDISPEDVEAAFGGFLERFGKRLLRLRVSSAEIRIIIKDPQTGAPVPLRALINNVSGYVIKTEMYTEVKNAKGEWVFKSLGKPGSMHLRPIATPYPVKEW 1492
                                   799       809       819       829       839       849       859       869       879       889       899       909       919       929       939       949       959       969       979       989       999      1009      1019      1029      1039      1049      1059      1069      1079      1089      1099      1109      1119      1129      1139      1152    | 1162      1172      1182      1192      1202|     1225      1235      1245      1255      1265      1275      1285      1295      1305      1315      1325      1335      1345      1355      1365      1375      1385      1395      1405      1415      1425      1435      1445      1455      1465      1475      1485       
                                                                                                                                                                                                                                                                                                                                                                                             1146|      |                                         1202|                                                                                                                                                                                                                                                                                    
                                                                                                                                                                                                                                                                                                                                                                                              1150      |                                          1216                                                                                                                                                                                                                                                                                    
                                                                                                                                                                                                                                                                                                                                                                                                     1157-SEP
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5I6E)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5I6E)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5I6E)

(-) Gene Ontology  (19, 19)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ACAC_YEAST | Q00955: 1od2 1od4 1uyr 1uys 1uyt 1uyv 1w2x 1w93 1w96 3h0j 3h0q 3h0s 3k8x 3pgq 3tv5 3tvu 3tvw 3tz3 4wyo 4wz8 5cs0 5cs4 5csa 5csk 5csl 5ctb 5ctc 5cte 5trc

(-) Related Entries Specified in the PDB File

5i6f RELATED STRUCTURE FROM THE SAME PUBLICATION
5i6g RELATED STRUCTURE FROM THE SAME PUBLICATION
5i6h RELATED STRUCTURE FROM THE SAME PUBLICATION
5i6i RELATED STRUCTURE FROM THE SAME PUBLICATION
5i87 RELATED STRUCTURE FROM THE SAME PUBLICATION