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(-) Description

Title :  CRYSTAL STRUCTURE OF THE HUMANIZED CARBOXYLTRANSFERASE DOMAIN OF YEAST ACETYL-COA CAROXYLASE IN COMPLEX WITH COMPOUND 4
 
Authors :  F. Rajamohan, E. Marr, A. Reyes, J. A. Landro, M. D Anderson, J. W. Corbe K. J. Dirico, J. H. Harwood, M. Tu, F. F. Vajdos
Date :  20 Sep 11  (Deposition) - 19 Oct 11  (Release) - 14 Dec 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A,B,C
Biol. Unit 1:  A  (2x)
Biol. Unit 2:  B,C  (1x)
Keywords :  Carboxyltransferase, Ligase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  F. Rajamohan, E. Marr, A. R. Reyes, J. A. Landro, M. D. Anderson, J. W. Corbett, K. J. Dirico, J. H. Harwood, M. Tu, F. F. Vajdos
Structure-Guided Inhibitor Design For Human Acetyl-Coenzyme A Carboxylase By Interspecies Active Site Conversion.
J. Biol. Chem. V. 286 41510 2011
PubMed-ID: 21953464  |  Reference-DOI: 10.1074/JBC.M111.275396

(-) Compounds

Molecule 1 - ACETYL-COA CARBOXYLASE
    ChainsA, B, C
    EC Number6.4.1.2, 6.3.4.14
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentCARBOXYLTRANSFERASE DOMAIN, RESIDUES 1476-2233
    GeneACC1, ABP2, FAS3, MTR7, YNR016C, N3175
    MutationYES
    Organism CommonBAKER'S YEAST
    Organism ScientificSACCHAROMYCES CEREVISIAE S288C
    Organism Taxid559292
    StrainATCC 204508 / S288C
    SynonymACC, FATTY ACID SYNTHETASE 3, MRNA TRANSPORT-DEFECTIVE PROTEIN 7, BIOTIN CARBOXYLASE

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit ABC
Biological Unit 1 (2x)A  
Biological Unit 2 (1x) BC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric Unit (1, 3)
No.NameCountTypeFull Name
107H3Ligand/Ion[4-(2H-CHROMEN-3-YLMETHYL)PIPERAZIN-1-YL]-[3-(1H-PYRAZOL-5-YL)PHENYL]METHANONE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
107H2Ligand/Ion[4-(2H-CHROMEN-3-YLMETHYL)PIPERAZIN-1-YL]-[3-(1H-PYRAZOL-5-YL)PHENYL]METHANONE
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
107H2Ligand/Ion[4-(2H-CHROMEN-3-YLMETHYL)PIPERAZIN-1-YL]-[3-(1H-PYRAZOL-5-YL)PHENYL]METHANONE

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA A:1761 , LYS A:1764 , VAL A:1765 , VAL A:1923 , ARG A:1954 , PHE A:1956 , SER A:1957 , LEU A:2025 , GLU A:2026 , GLU A:2028 , GLY A:2029 , GLU A:2032 , ILE A:2033BINDING SITE FOR RESIDUE 07H A 1
2AC2SOFTWAREVAL B:1923 , ARG B:1954 , PHE B:1956 , SER B:1957 , LEU B:2025 , GLU B:2026 , GLU B:2028 , GLY B:2029 , GLU B:2032 , ALA C:1761BINDING SITE FOR RESIDUE 07H B 1
3AC3SOFTWAREALA B:1761 , LYS B:1764 , VAL B:1765 , VAL C:1923 , ARG C:1954 , PHE C:1956 , SER C:1957 , LEU C:2025 , GLU C:2026 , GLU C:2028 , GLY C:2029 , GLU C:2032 , ILE C:2033BINDING SITE FOR RESIDUE 07H C 1

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3TVW)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric Unit
No.Residues
1Arg A:1481 -Pro A:1482
2Arg B:1481 -Pro B:1482
3Leu B:2047 -Asp B:2048

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3TVW)

(-) PROSITE Motifs  (2, 5)

Asymmetric Unit (2, 5)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COA_CT_NTERPS50980 Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile.ACAC_YEAST1486-1822
 
  2A:1486-1822
B:1486-1822
2COA_CT_CTERPS50989 Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile.ACAC_YEAST1826-2141
 
 
  3A:1826-2141
B:1826-2141
C:1826-2141
Biological Unit 1 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COA_CT_NTERPS50980 Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile.ACAC_YEAST1486-1822
 
  2A:1486-1822
-
2COA_CT_CTERPS50989 Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile.ACAC_YEAST1826-2141
 
 
  2A:1826-2141
-
-
Biological Unit 2 (2, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COA_CT_NTERPS50980 Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile.ACAC_YEAST1486-1822
 
  1-
B:1486-1822
2COA_CT_CTERPS50989 Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile.ACAC_YEAST1826-2141
 
 
  2-
B:1826-2141
C:1826-2141

(-) Exons   (1, 3)

Asymmetric Unit (1, 3)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1YNR016C1YNR016C.1XIV:661377-6546766702ACAC_YEAST1-223322333A:1480-2195 (gaps)
B:1480-2189 (gaps)
C:1495-2192 (gaps)
716
710
698

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:711
 aligned with ACAC_YEAST | Q00955 from UniProtKB/Swiss-Prot  Length:2233

    Alignment length:716
                                  1489      1499      1509      1519      1529      1539      1549      1559      1569      1579      1589      1599      1609      1619      1629      1639      1649      1659      1669      1679      1689      1699      1709      1719      1729      1739      1749      1759      1769      1779      1789      1799      1809      1819      1829      1839      1849      1859      1869      1879      1889      1899      1909      1919      1929      1939      1949      1959      1969      1979      1989      1999      2009      2019      2029      2039      2049      2059      2069      2079      2089      2099      2109      2119      2129      2139      2149      2159      2169      2179      2189      
          ACAC_YEAST   1480 LRPIATPYPVKEWLQPKRYKAHLMGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFISNELIEDENGELTEVEREPGANAIGMVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKMLGREVYTSNLQLGGTQIMYNNGVSHLTAVDDLAGVEKIVEWMSYVPAKRNMPVPILETKDTWDRPVDFTPTNDETYDVRWMIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRLDDKYRELRSQLSNKSLAPEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLRRRLNEEYLIKRLSHQVGEASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGLKLESFA 2195
               SCOP domains d3tvwa1 A:1480-1814 automated matches                                                                                                                                                                                                                                                                                                          d3tvwa2 A:1815-2195 automated matches                                                                                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh.....hhh.eeeeeeee.....eeee..........eeeeeeeeee..eeeeeeeeeeee...hhhhh.hhhhhhhhhhhhhhhhhhh..eeeee.................eeee....hhhh.eeeeeehhhhhhhhhhh.hhh.eeeeeeee..eeeeeeeee.......hhhhhhhhhhhhhhhhhhhh...eeeee...eehhhhhhhhhh.eeeee....ee..hhhhhhhhhh......hhhhhhhhhhh......eee.hhhhhhhhhhhhhh.................................hhhhhhhheee..eee.........eee.......eeeeeeee..eeeeeeee....eeeee...........eeeee...eehhhhhhhhhhhhhhhhh.....eee.....ee..hhhhhhhhhhhhhhhhhhhhhh....eeeee....eeehhhhhh.hhhhh...eeeeee...eee..hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh.-----...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------COA_CT_NTER  PDB: A:1486-1822 UniProt: 1486-1822                                                                                                                                                                                                                                                                                                 ---COA_CT_CTER  PDB: A:1826-2141 UniProt: 1826-2141                                                                                                                                                                                                                                                                            ------------------------------------------------------ PROSITE
               Transcript 1 Exon 1.1  PDB: A:1480-2195 (gaps) UniProt: 1-2233 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               Transcript 1
                3tvw A 1480 LRPIATPYPVKEWLQPKRYKAHLMGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFISNELIEDENGELTEVEREPGANAIGMVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGASALNKVLGREVYTSNLQLGGTQIMYNNGVSHLTAVDDLAGVEKIVEWMSYVPAKRNMPVPILETKDTWDRPVDFTPTNDETYDVRWMIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQQAGQVWFPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPEGTVEIKFRREKLLDTMNRLDDKYRELRSQL-----APEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLRRRLNEEYLIKRLSHQVGEASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGLKLESFA 2195
                                  1489      1499      1509      1519      1529      1539      1549      1559      1569      1579      1589      1599      1609      1619      1629      1639      1649      1659      1669      1679      1689      1699      1709      1719      1729      1739      1749      1759      1769      1779      1789      1799      1809      1819      1829      1839      1849      1859      1869      1879      1889      1899      1909      1919      1929      1939      1949      1959      1969      1979      1989      1999      2009      2019      2029      2039      2049        |-    | 2069      2079      2089      2099      2109      2119      2129      2139      2149      2159      2169      2179      2189      
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           2058  2064                                                                                                                                   

Chain B from PDB  Type:PROTEIN  Length:705
 aligned with ACAC_YEAST | Q00955 from UniProtKB/Swiss-Prot  Length:2233

    Alignment length:710
                                  1489      1499      1509      1519      1529      1539      1549      1559      1569      1579      1589      1599      1609      1619      1629      1639      1649      1659      1669      1679      1689      1699      1709      1719      1729      1739      1749      1759      1769      1779      1789      1799      1809      1819      1829      1839      1849      1859      1869      1879      1889      1899      1909      1919      1929      1939      1949      1959      1969      1979      1989      1999      2009      2019      2029      2039      2049      2059      2069      2079      2089      2099      2109      2119      2129      2139      2149      2159      2169      2179      2189
          ACAC_YEAST   1480 LRPIATPYPVKEWLQPKRYKAHLMGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFISNELIEDENGELTEVEREPGANAIGMVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKMLGREVYTSNLQLGGTQIMYNNGVSHLTAVDDLAGVEKIVEWMSYVPAKRNMPVPILETKDTWDRPVDFTPTNDETYDVRWMIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRLDDKYRELRSQLSNKSLAPEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLRRRLNEEYLIKRLSHQVGEASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGL 2189
               SCOP domains d3tvwb1 B:1480-1814 automated matches                                                                                                                                                                                                                                                                                                          d3tvwb2 B:1815-2189 automated matches                                                                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh.....hhh.eeeeeeee.....eeee..........eeeeeeeeee..eeeeeeeeeeee...hhhhh.hhhhhhhhhhhhhhhhhhh..eeeee.................eeee....hhhh.eeeeeehhhhhhhhhhhhhhh.eeeeeeee..eeeeeeeee.......hhhhhhhhhhhhhhhhhhh....eeeee...eehhhhhhhhhh.eeeee....ee..hhhhhhhhhh......hhhhhhhhhhh......eee.hhhhhhhhhhhhhh.................................hhhhhhhheee..eee.........eee.......eeeeeeee..eeeeeeee....eeeee...........eeeee...eehhhhhhhhhhhhhhhhh.....eee.....ee..hhhhhhhhhhhhhhhhhhhhhh....eeeee....eehhhhhhhhhhhhh.....eeee...ee...hhhhhhhhhhhhhhhhhhh....hhhhhhhhh.-----...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------COA_CT_NTER  PDB: B:1486-1822 UniProt: 1486-1822                                                                                                                                                                                                                                                                                                 ---COA_CT_CTER  PDB: B:1826-2141 UniProt: 1826-2141                                                                                                                                                                                                                                                                            ------------------------------------------------ PROSITE
               Transcript 1 Exon 1.1  PDB: B:1480-2189 (gaps) UniProt: 1-2233 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         Transcript 1
                3tvw B 1480 LRPIATPYPVKEWLQPKRYKAHLMGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFISNELIEDENGELTEVEREPGANAIGMVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGASALNKVLGREVYTSNLQLGGTQIMYNNGVSHLTAVDDLAGVEKIVEWMSYVPAKRNMPVPILETKDTWDRPVDFTPTNDETYDVRWMIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQQAGQVWFPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPEGTVEIKFRREKLLDTMNRLDDKYRELRSQL-----APEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLRRRLNEEYLIKRLSHQVGEASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGL 2189
                                  1489      1499      1509      1519      1529      1539      1549      1559      1569      1579      1589      1599      1609      1619      1629      1639      1649      1659      1669      1679      1689      1699      1709      1719      1729      1739      1749      1759      1769      1779      1789      1799      1809      1819      1829      1839      1849      1859      1869      1879      1889      1899      1909      1919      1929      1939      1949      1959      1969      1979      1989      1999      2009      2019      2029      2039      2049        |-    | 2069      2079      2089      2099      2109      2119      2129      2139      2149      2159      2169      2179      2189
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           2058  2064                                                                                                                             

Chain C from PDB  Type:PROTEIN  Length:693
 aligned with ACAC_YEAST | Q00955 from UniProtKB/Swiss-Prot  Length:2233

    Alignment length:698
                                  1504      1514      1524      1534      1544      1554      1564      1574      1584      1594      1604      1614      1624      1634      1644      1654      1664      1674      1684      1694      1704      1714      1724      1734      1744      1754      1764      1774      1784      1794      1804      1814      1824      1834      1844      1854      1864      1874      1884      1894      1904      1914      1924      1934      1944      1954      1964      1974      1984      1994      2004      2014      2024      2034      2044      2054      2064      2074      2084      2094      2104      2114      2124      2134      2144      2154      2164      2174      2184        
          ACAC_YEAST   1495 PKRYKAHLMGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFISNELIEDENGELTEVEREPGANAIGMVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKMLGREVYTSNLQLGGTQIMYNNGVSHLTAVDDLAGVEKIVEWMSYVPAKRNMPVPILETKDTWDRPVDFTPTNDETYDVRWMIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRLDDKYRELRSQLSNKSLAPEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLRRRLNEEYLIKRLSHQVGEASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGLKLE 2192
               SCOP domains d3tvwc1 C:1495-1814 automated matches                                                                                                                                                                                                                                                                                           d3tvwc2 C:1815-2192 automated matches                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhh...hhhhhhhhhhhhhhhhhhhhh.....hhh.eeeeeeee.....eeee..........eeeeeeeeee..eeeeeeeeeeee...hhhhh.hhhhhhhhhhhhhhhhhhh..eeeee.................eeee....hhhh.eeeeeehhhhhhhhhhh.hhh.eeeeeeee..eeeeeeeee.......hhhhhhhhhhhhhhhhhhhhhh.eeeee...eehhhhhhhhhh.eeeee....ee..hhhhhhhhhh......hhhhhhhhhhh......eee.hhhhhhhhhhhhhh.................................hhhhhhhheee..eee.........eee.......eeeeeeee..eeeeeeee....eeeee...........eeeee.....hhhhhhhhhhhhhhhhh.....eeee........hhhhhhhhhhhhhhhhhhhhhh....eeeee....eehhhhhhhhhhhhh...eeeeee...ee...hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh.-----...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE COA_CT_NTER  PDB: - UniProt: 1486-1822                                                                                                                                                                                                                                                                                                  ---COA_CT_CTER  PDB: C:1826-2141 UniProt: 1826-2141                                                                                                                                                                                                                                                                            --------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: C:1495-2192 (gaps) UniProt: 1-2233 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             Transcript 1
                3tvw C 1495 PKRYKAHLMGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFISNELIEDENGELTEVEREPGANAIGMVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGASALNKVLGREVYTSNLQLGGTQIMYNNGVSHLTAVDDLAGVEKIVEWMSYVPAKRNMPVPILETKDTWDRPVDFTPTNDETYDVRWMIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQQAGQVWFPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPEGTVEIKFRREKLLDTMNRLDDKYRELRSQL-----APEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLRRRLNEEYLIKRLSHQVGEASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGLKLE 2192
                                  1504      1514      1524      1534      1544      1554      1564      1574      1584      1594      1604      1614      1624      1634      1644      1654      1664      1674      1684      1694      1704      1714      1724      1734      1744      1754      1764      1774      1784      1794      1804      1814      1824      1834      1844      1854      1864      1874      1884      1894      1904      1914      1924      1934      1944      1954      1964      1974      1984      1994      2004      2014      2024      2034      2044      2054   |  2064      2074      2084      2094      2104      2114      2124      2134      2144      2154      2164      2174      2184        
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            2058  2064                                                                                                                                

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3TVW)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3TVW)

(-) Gene Ontology  (19, 19)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C   (ACAC_YEAST | Q00955)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0003989    acetyl-CoA carboxylase activity    Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA.
    GO:0004075    biotin carboxylase activity    Catalysis of the reaction: ATP + biotin-carboxyl-carrier protein + CO2 = ADP + phosphate + carboxybiotin-carboxyl-carrier protein.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0006633    fatty acid biosynthetic process    The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
    GO:0006631    fatty acid metabolic process    The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
    GO:0006629    lipid metabolic process    The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
    GO:0042759    long-chain fatty acid biosynthetic process    The chemical reactions and pathways resulting in the formation of long-chain fatty acids, any fatty acid with a chain length between C13 and C22.
    GO:2001295    malonyl-CoA biosynthetic process    The chemical reactions and pathways resulting in the formation of malonyl-CoA, the S-malonyl derivative of coenzyme A.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0006998    nuclear envelope organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear envelope.
    GO:0006606    protein import into nucleus    The directed movement of a protein from the cytoplasm to the nucleus.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005783    endoplasmic reticulum    The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
    GO:0005789    endoplasmic reticulum membrane    The lipid bilayer surrounding the endoplasmic reticulum.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ACAC_YEAST | Q009551od2 1od4 1uyr 1uys 1uyt 1uyv 1w2x 1w93 1w96 3h0j 3h0q 3h0s 3k8x 3pgq 3tv5 3tvu 3tz3 4wyo 4wz8 5cs0 5cs4 5csa 5csk 5csl 5ctb 5ctc 5cte 5i6e 5trc

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 3TVW)