Chain A from PDB Type:PROTEIN Length:341
aligned with ODPA_GEOSE | P21873 from UniProtKB/Swiss-Prot Length:369
Alignment length:364
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365
ODPA_GEOSE 6 FQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 369
SCOP domains d1w88a_ A: Pyruvate dehydrogenase E1-alpha, PdhA SCOP domains
CATH domains 1w88A00 A:5-368 [code=3.40.50.970, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhh...ee..........hhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhh......eee....hhhhhhhh..hhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee..ee..eehhhhh....hhhhhhhh...eeeee..hhhhhhhhhhhhhhhhhh....eeeeee....-----------------------..hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhh.....hhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1w88 A 5 FQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGNFYQGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRY-----------------------KKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 368
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 | - - 294 304 314 324 334 344 354 364
268 292
Chain B from PDB Type:PROTEIN Length:324
aligned with ODPB_GEOSE | P21874 from UniProtKB/Swiss-Prot Length:325
Alignment length:324
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
ODPB_GEOSE 2 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 325
SCOP domains d1w88b1 B:1-192 Pyruvate dehydrogenase E1-beta, PdhB, N-terminal domain d1w88b2 B:193-324 Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain SCOP domains
CATH domains 1w88B01 B:1-191 [code=3.40.50.970, no name defined] 1w88B02 B:192-324 [code=3.40.50.920, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .eeehhhhhhhhhhhhhhhh..eeeee..............hhhhhhh...eee...hhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhhhhhhhhhh........eeeeee.............hhhhhh.....eee...hhhhhhhhhhhhhhh...eeeeee.hhhh..eee.............eeee....eeeee..hhhhhhhhhhhhhhh....eeeee..eee..hhhhhhhhhhhhh.eeeeeeee....hhhhhhhhhhhhhhhhh....eeeee......hhhhhhhhh.hhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1w88 B 1 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 324
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320
Chain C from PDB Type:PROTEIN Length:343
aligned with ODPA_GEOSE | P21873 from UniProtKB/Swiss-Prot Length:369
Alignment length:364
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365
ODPA_GEOSE 6 FQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 369
SCOP domains d1w88c_ C: Pyruvate dehydrogenase E1-alpha, PdhA SCOP domains
CATH domains 1w88C00 C:5-368 [code=3.40.50.970, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhh...ee..................hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh.....eee....hhhhhhhhh.hhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee..ee..eehhhhh....hhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhh....eeeeee....---------------------....hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhh.....hhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1w88 C 5 FQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGNFYQGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRY---------------------WAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 368
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 | - - | 294 304 314 324 334 344 354 364
268 290
Chain D from PDB Type:PROTEIN Length:324
aligned with ODPB_GEOSE | P21874 from UniProtKB/Swiss-Prot Length:325
Alignment length:324
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
ODPB_GEOSE 2 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 325
SCOP domains d1w88d1 D:1-192 Pyruvate dehydrogenase E1-beta, PdhB, N-terminal domain d1w88d2 D:193-324 Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain SCOP domains
CATH domains 1w88D01 D:1-191 [code=3.40.50.970, no name defined] 1w88D02 D:192-324 [code=3.40.50.920, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .eehhhhhhhhhhhhhhhhh..eeeee..............hhhhhhh...eee...hhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhhhhhhhhhh........eeeeee.............hhhhhh.....eee...hhhhhhhhhhhhhhh...eeeeee.hhh....ee.............eeee....eeeee..hhhhhhhhhhhhhhhh...eeeee..eee..hhhhhhhhhhhhh.eeeeeeee....hhhhhhhhhhhhhhhhh....eeeee......hhhhhhhhh.hhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1w88 D 1 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 324
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320
Chain E from PDB Type:PROTEIN Length:328
aligned with ODPA_GEOSE | P21873 from UniProtKB/Swiss-Prot Length:369
Alignment length:364
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365
ODPA_GEOSE 6 FQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 369
SCOP domains d1w88e_ E: Pyruvate dehydrogenase E1-alpha, PdhA SCOP domains
CATH domains 1w88E00 E:5-368 [code=3.40.50.970, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhh.......................hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh.....eee....hhhhhhhh..hhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee....----------...hhhhhhh....eeeee..hhhhhhhhhhhhhhhhhh....eeeeee.--------------------------..hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhh.....hhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1w88 E 5 FQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGNFYQGINFAGAFKAPAIFVVQNNRFA----------AKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLC--------------------------KKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 368
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204| - | 224 234 244 254 264| - - 294 304 314 324 334 344 354 364
205 216 265 292
Chain F from PDB Type:PROTEIN Length:310
aligned with ODPB_GEOSE | P21874 from UniProtKB/Swiss-Prot Length:325
Alignment length:324
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
ODPB_GEOSE 2 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 325
SCOP domains d1w88f1 F:1-192 Pyruvate dehydrogenase E1-beta, PdhB, N-terminal domain d1w88f2 F:193-324 Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain SCOP domains
CATH domains 1w88F01 F:1-191 [code=3.40.50.970, no name defined] 1w88F02 F:192-324 [code=3.40.50.920, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .eehhhhhhhhhhhhhhhhh..eeeee..............hhhhhhh...eee...hhhhhhhhhhhhhhh..eeee..------.hhhhhhh.hhhhhhhhh........eeeeee.--------....hhhhhh.....eee...hhhhhhhhhhhhhhh...eeeeee........ee.............eeee....eeeee..hhhhhhhhhhhhhhh....eeeee..eee..hhhhhhhhhhhhh.eeeeeeee....hhhhhhhhhhhhhhhhh....eeeee......hhhhhhhhh.hhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1w88 F 1 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEI------YEVMDSICGQMARIRYRTGGRYHMPITIRSPFG--------HSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 324
10 20 30 40 50 60 70 80 | 90 100 110 |- 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320
80 87 119 128
Chain G from PDB Type:PROTEIN Length:331
aligned with ODPA_GEOSE | P21873 from UniProtKB/Swiss-Prot Length:369
Alignment length:364
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365
ODPA_GEOSE 6 FQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 369
SCOP domains d1w88g_ G: Pyruvate dehydrogenase E1-alpha, PdhA SCOP domains
CATH domains 1w88G00 G:5-368 [code=3.40.50.970, no name defined] CATH domains
Pfam domains (1) ---------------------------------------------E1_dh-1w88G01 G:50-341 --------------------------- Pfam domains (1)
Pfam domains (2) ---------------------------------------------E1_dh-1w88G02 G:50-341 --------------------------- Pfam domains (2)
Pfam domains (3) ---------------------------------------------E1_dh-1w88G03 G:50-341 --------------------------- Pfam domains (3)
Pfam domains (4) ---------------------------------------------E1_dh-1w88G04 G:50-341 --------------------------- Pfam domains (4)
Sec.struct. author ...hhhhhhhhhhh...ee..................hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh.....eee....hhhhhhhh..hhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee....-------......hhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhh....eeeeee.--------------------------..hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhh.....hhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1w88 G 5 FQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGNFYQGINFAGAFKAPAIFVVQNNRFA-------QTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLC--------------------------KKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 368
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204| 214 224 234 244 254 264| - - 294 304 314 324 334 344 354 364
205 213 265 292
Chain H from PDB Type:PROTEIN Length:317
aligned with ODPB_GEOSE | P21874 from UniProtKB/Swiss-Prot Length:325
Alignment length:324
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
ODPB_GEOSE 2 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 325
SCOP domains d1w88h1 H:1-192 Pyruvate dehydrogenase E1-beta, PdhB, N-terminal domain d1w88h2 H:193-324 Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain SCOP domains
CATH domains 1w88H01 H:1-191 [code=3.40.50.970, no name defined] 1w88H02 H:192-324 [code=3.40.50.920, no name defined] CATH domains
Pfam domains (1) Transket_pyr-1w88H01 H:1-179 -------------Transketolase_C-1w88H05 H:193-315 --------- Pfam domains (1)
Pfam domains (2) Transket_pyr-1w88H02 H:1-179 -------------Transketolase_C-1w88H06 H:193-315 --------- Pfam domains (2)
Pfam domains (3) Transket_pyr-1w88H03 H:1-179 -------------Transketolase_C-1w88H07 H:193-315 --------- Pfam domains (3)
Pfam domains (4) Transket_pyr-1w88H04 H:1-179 -------------Transketolase_C-1w88H08 H:193-315 --------- Pfam domains (4)
Sec.struct. author .eehhhhhhhhhhhhhhhhh..eeeee..............hhhhhhh...eee...hhhhhhhhhhhhhhh..eeee.........hhhhhhh.hhhhhhhhh........eeeeee...-------...hhhhhh.....eee...hhhhhhhhhhhhhhh...eeeeee.hhh....ee.............eeee....eeeee..hhhhhhhhhhhhhhh....eeeee..eee..hhhhhhhhhhhhh.eeeeeeee....hhhhhhhhhhhhhhhhh....eeeee......hhhhhhhhh.hhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1w88 H 1 AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGG-------SDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETAKKVMNF 324
10 20 30 40 50 60 70 80 90 100 110 120| 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320
121 129
Chain I from PDB Type:PROTEIN Length:40
aligned with ODP2_GEOSE | P11961 from UniProtKB/Swiss-Prot Length:428
Alignment length:40
137 147 157 167
ODP2_GEOSE 128 RVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFL 167
SCOP domains d1w88i_ I: SCOP domains
CATH domains 1w88I00 I:128-167 CATH domains
Pfam domains ---------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhh..........hhhhh.hhhhhhhhh Sec.struct. author
SAPs(SNPs) ---------------------------------------- SAPs(SNPs)
PROSITE --PSBD PDB: I:130-167 UniProt: 130-167 PROSITE
Transcript ---------------------------------------- Transcript
1w88 I 128 RVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFL 167
137 147 157 167
Chain J from PDB Type:PROTEIN Length:43
aligned with ODP2_GEOSE | P11961 from UniProtKB/Swiss-Prot Length:428
Alignment length:43
137 147 157 167
ODP2_GEOSE 128 RVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLAGG 170
SCOP domains d1w88j_ J: SCOP domains
CATH domains 1w88J00 J:128-170 CATH domains
Pfam domains (1) E3_binding-1w88J01 J:128-165 ----- Pfam domains (1)
Pfam domains (2) E3_binding-1w88J02 J:128-165 ----- Pfam domains (2)
Sec.struct. author ....hhhhhhhhhhh..........hhhhh.hhhhhhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------- SAPs(SNPs)
PROSITE --PSBD PDB: J:130-167 UniProt: 130-167 --- PROSITE
Transcript ------------------------------------------- Transcript
1w88 J 128 RVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLAGG 170
137 147 157 167
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |