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(-) Description

Title :  GLUCOSE-FRUCTOSE OXIDOREDUCTASE
 
Authors :  R. L. Kingston, R. K. Scopes, E. N. Baker
Date :  17 Oct 96  (Deposition) - 21 Apr 97  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  E,F  (2x)
Keywords :  Nadp Binding, Osmotic Protection, Oxidoreductase, Periplasm (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. L. Kingston, R. K. Scopes, E. N. Baker
The Structure Of Glucose-Fructose Oxidoreductase From Zymomonas Mobilis: An Osmoprotective Periplasmic Enzyme Containing Non-Dissociable Nadp.
Structure V. 4 1413 1996
PubMed-ID: 8994968  |  Reference-DOI: 10.1016/S0969-2126(96)00149-9
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - GLUCOSE-FRUCTOSE OXIDOREDUCTASE
    Cellular Location: PERIPLASM
    Chains: A, B, C, D, E, F
    EC Number: 1.1.99.28
    Organism Scientific: ZYMOMONAS MOBILIS
    Organism Taxid: 542

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): ABCD  
Biological Unit 2 (2x):     EF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 6)

Asymmetric Unit (1, 6)
No.NameCountTypeFull Name
1NDP6Ligand/IonNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1NDP4Ligand/IonNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
Biological Unit 2 (1, 4)
No.NameCountTypeFull Name
1NDP4Ligand/IonNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:38 , LEU A:39 , GLY A:40 , LYS A:41 , TYR A:42 , SER A:64 , GLY A:65 , LYS A:69 , TYR A:87 , ILE A:105 , LEU A:106 , PRO A:107 , ASN A:108 , LEU A:110 , HIS A:111 , GLU A:128 , LYS A:129 , GLY A:155 , ARG A:157 , ALA A:196 , TRP A:199 , ARG A:200 , TYR A:217 , TYR A:296 , HOH A:501 , HOH A:505 , HOH A:514 , HOH A:517 , HOH A:522 , HOH A:546 , HOH A:598 , HOH A:599 , VAL D:10 , PRO D:11 , THR D:13 , PRO D:14 , ALA D:15 , GLY D:16 , ARG D:17BINDING SITE FOR RESIDUE NDP A 500
2AC2SOFTWAREGLY B:38 , LEU B:39 , GLY B:40 , LYS B:41 , TYR B:42 , SER B:64 , GLY B:65 , LYS B:69 , TYR B:87 , ILE B:105 , LEU B:106 , PRO B:107 , ASN B:108 , LEU B:110 , HIS B:111 , GLU B:128 , LYS B:129 , GLY B:155 , ARG B:157 , ALA B:196 , TRP B:199 , ARG B:200 , TYR B:217 , TYR B:296 , HOH B:508 , HOH B:513 , HOH B:521 , HOH B:524 , HOH B:529 , HOH B:554 , HOH B:606 , HOH B:607 , VAL C:10 , PRO C:11 , THR C:13 , PRO C:14 , ALA C:15 , GLY C:16 , ARG C:17BINDING SITE FOR RESIDUE NDP B 500
3AC3SOFTWAREVAL B:10 , PRO B:11 , THR B:13 , PRO B:14 , ALA B:15 , GLY B:16 , ARG B:17 , GLY C:38 , LEU C:39 , GLY C:40 , LYS C:41 , TYR C:42 , SER C:64 , GLY C:65 , LYS C:69 , TYR C:87 , ILE C:105 , LEU C:106 , PRO C:107 , ASN C:108 , LEU C:110 , HIS C:111 , GLU C:128 , LYS C:129 , GLY C:155 , ARG C:157 , ALA C:196 , TRP C:199 , ARG C:200 , TYR C:217 , TYR C:296 , HOH C:518 , HOH C:523 , HOH C:531 , HOH C:534 , HOH C:539 , HOH C:564 , HOH C:615 , HOH C:616BINDING SITE FOR RESIDUE NDP C 500
4AC4SOFTWAREVAL A:10 , PRO A:11 , THR A:13 , PRO A:14 , ALA A:15 , GLY A:16 , ARG A:17 , GLY D:38 , LEU D:39 , GLY D:40 , LYS D:41 , TYR D:42 , SER D:64 , GLY D:65 , LYS D:69 , TYR D:87 , ILE D:105 , LEU D:106 , PRO D:107 , ASN D:108 , LEU D:110 , HIS D:111 , GLU D:128 , LYS D:129 , GLY D:155 , ARG D:157 , ALA D:196 , TRP D:199 , ARG D:200 , TYR D:217 , TYR D:296 , HOH D:526 , HOH D:530 , HOH D:539 , HOH D:542 , HOH D:547 , HOH D:571 , HOH D:622 , HOH D:623BINDING SITE FOR RESIDUE NDP D 500
5AC5SOFTWAREVAL E:10 , PRO E:11 , THR E:13 , PRO E:14 , ALA E:15 , GLY E:16 , ARG E:17 , GLY E:38 , LEU E:39 , GLY E:40 , LYS E:41 , TYR E:42 , SER E:64 , GLY E:65 , LYS E:69 , TYR E:87 , ILE E:105 , LEU E:106 , PRO E:107 , ASN E:108 , LEU E:110 , HIS E:111 , GLU E:128 , LYS E:129 , GLY E:155 , ARG E:157 , ALA E:196 , TRP E:199 , ARG E:200 , TYR E:217 , TYR E:296 , HOH E:561 , HOH E:566 , HOH E:575 , HOH E:578 , HOH E:583 , HOH E:620 , HOH E:683 , HOH E:684BINDING SITE FOR RESIDUE NDP E 500
6AC6SOFTWAREVAL F:10 , PRO F:11 , THR F:13 , PRO F:14 , ALA F:15 , GLY F:16 , ARG F:17 , GLY F:38 , LEU F:39 , GLY F:40 , LYS F:41 , TYR F:42 , SER F:64 , GLY F:65 , LYS F:69 , TYR F:87 , ILE F:105 , LEU F:106 , PRO F:107 , ASN F:108 , LEU F:110 , HIS F:111 , GLU F:128 , LYS F:129 , GLY F:155 , ARG F:157 , ALA F:196 , TRP F:199 , ARG F:200 , TYR F:217 , TYR F:296 , HOH F:701 , HOH F:706 , HOH F:715 , HOH F:718 , HOH F:723 , HOH F:760 , HOH F:823 , HOH F:824BINDING SITE FOR RESIDUE NDP F 500

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1OFG)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Lys A:129 -Pro A:130
2Asp A:291 -Pro A:292
3Lys B:129 -Pro B:130
4Asp B:291 -Pro B:292
5Lys C:129 -Pro C:130
6Asp C:291 -Pro C:292
7Lys D:129 -Pro D:130
8Asp D:291 -Pro D:292
9Lys E:129 -Pro E:130
10Asp E:291 -Pro E:292
11Lys F:129 -Pro F:130
12Asp F:291 -Pro F:292

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1OFG)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1OFG)

(-) Exons   (0, 0)

(no "Exon" information available for 1OFG)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:381
 aligned with GFO_ZYMMO | Q07982 from UniProtKB/Swiss-Prot  Length:433

    Alignment length:381
                                    62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432 
            GFO_ZYMMO    53 ATLPAGASQVPTTPAGRPMPYAIRPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGALSHGASSYSTTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYVRQGGY 433
               SCOP domains d1ofga1 A:1-160,A:323-381 Glucose-fructose oxidoreductase, N-terminal domain                                                                                    d1ofga2 A:161-322 Glucose-fructose oxidoreductase                                                                                                                 d1ofga1 A:1-160,A:323-381                                   SCOP domains
               CATH domains ---------------------1ofgA01 A:22-160,A:315-345 NAD(P)-binding Rossmann-like Domain                                                                             1ofgA02 A:161-314,A:346-381 Dihydrodipicolinate Reductase; domain 2                                                                                       1ofgA01 A:22-160,A:315-345     1ofgA02 A:161-314,A:346-381          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhh.......................eeeeee...hhhhh.hhhhh.....eeeeeee...hhhhhhhhhhh...hhh......hhhhh......eeee...hhhhhhhhhhhhh...eeee.......hhhhhhhhhhhhhh...eee..hhh..hhhhhhhhhhh......eeeeeeeee.......hhhh....hhhh...hhhh.hhhhhhhhhhhh...eeeeeeeee.....hhh.....eeeeeeee....eeeeeee.....eeeeeeee...eeee..........eeeee..eeeee...........hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhh................ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ofg A   1 ATLPAGASQVPTTPAGRPMPYAIRPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGALSHGASSYSTTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYVRQGGY 381
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380 


Chain B from PDB  Type:PROTEIN  Length:381
 aligned with GFO_ZYMMO | Q07982 from UniProtKB/Swiss-Prot  Length:433

    Alignment length:381
                                    62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432 
            GFO_ZYMMO    53 ATLPAGASQVPTTPAGRPMPYAIRPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGALSHGASSYSTTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYVRQGGY 433
               SCOP domains d1ofgb1 B:1-160,B:323-381 Glucose-fructose oxidoreductase, N-terminal domain                                                                                    d1ofgb2 B:161-322 Glucose-fructose oxidoreductase                                                                                                                 d1ofgb1 B:1-160,B:323-381                                   SCOP domains
               CATH domains ---------------------1ofgB01 B:22-160,B:315-345 NAD(P)-binding Rossmann-like Domain                                                                             1ofgB02 B:161-314,B:346-381 Dihydrodipicolinate Reductase; domain 2                                                                                       1ofgB01 B:22-160,B:315-345     1ofgB02 B:161-314,B:346-381          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhh.......................eeeeee...hhhhh.hhhhh.....eeeeeee...hhhhhhhhhhh...hhh......hhhhh......eeee...hhhhhhhhhhhhh...eeee.......hhhhhhhhhhhhhh...eee..hhh..hhhhhhhhhhh......eeeeeeeee.......hhhh....hhhh...hhhh.hhhhhhhhhhhh...eeeeeeeee.....hhh.....eeeeeeee....eeeeeee.....eeeeeeee...eeee..........eeeee..eeeee...........hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhh................ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ofg B   1 ATLPAGASQVPTTPAGRPMPYAIRPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGALSHGASSYSTTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYVRQGGY 381
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380 


Chain C from PDB  Type:PROTEIN  Length:381
 aligned with GFO_ZYMMO | Q07982 from UniProtKB/Swiss-Prot  Length:433

    Alignment length:381
                                    62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432 
            GFO_ZYMMO    53 ATLPAGASQVPTTPAGRPMPYAIRPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGALSHGASSYSTTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYVRQGGY 433
               SCOP domains d1ofgc1 C:1-160,C:323-381 Glucose-fructose oxidoreductase, N-terminal domain                                                                                    d1ofgc2 C:161-322 Glucose-fructose oxidoreductase                                                                                                                 d1ofgc1 C:1-160,C:323-381                                   SCOP domains
               CATH domains ---------------------1ofgC01 C:22-160,C:315-345 NAD(P)-binding Rossmann-like Domain                                                                             1ofgC02 C:161-314,C:346-381 Dihydrodipicolinate Reductase; domain 2                                                                                       1ofgC01 C:22-160,C:315-345     1ofgC02 C:161-314,C:346-381          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhh.......................eeeeee...hhhhh.hhhhh.....eeeeeee...hhhhhhhhhhh...hhh......hhhhh......eeee...hhhhhhhhhhhhh...eeee.......hhhhhhhhhhhhhh...eee..hhh..hhhhhhhhhhh......eeeeeeeee.......hhhh....hhhh...hhhh.hhhhhhhhhhhh...eeeeeeeee.....hhh.....eeeeeeee....eeeeeee.....eeeeeeee...eeee..........eeeee..eeeee...........hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhh................ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ofg C   1 ATLPAGASQVPTTPAGRPMPYAIRPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGALSHGASSYSTTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYVRQGGY 381
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380 


Chain D from PDB  Type:PROTEIN  Length:381
 aligned with GFO_ZYMMO | Q07982 from UniProtKB/Swiss-Prot  Length:433

    Alignment length:381
                                    62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432 
            GFO_ZYMMO    53 ATLPAGASQVPTTPAGRPMPYAIRPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGALSHGASSYSTTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYVRQGGY 433
               SCOP domains d1ofgd1 D:1-160,D:323-381 Glucose-fructose oxidoreductase, N-terminal domain                                                                                    d1ofgd2 D:161-322 Glucose-fructose oxidoreductase                                                                                                                 d1ofgd1 D:1-160,D:323-381                                   SCOP domains
               CATH domains ---------------------1ofgD01 D:22-160,D:315-345 NAD(P)-binding Rossmann-like Domain                                                                             1ofgD02 D:161-314,D:346-381 Dihydrodipicolinate Reductase; domain 2                                                                                       1ofgD01 D:22-160,D:315-345     1ofgD02 D:161-314,D:346-381          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhh.......................eeeeee...hhhhh.hhhhh.....eeeeeee...hhhhhhhhhhh...hhh......hhhhh......eeee...hhhhhhhhhhhhh...eeee.......hhhhhhhhhhhhhh...eee..hhh..hhhhhhhhhhh......eeeeeeeee.......hhhh....hhhh...hhhh.hhhhhhhhhhhh...eeeeeeeee.....hhh.....eeeeeeee....eeeeeee.....eeeeeeee...eeee..........eeeee..eeeee...........hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhh................ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ofg D   1 ATLPAGASQVPTTPAGRPMPYAIRPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGALSHGASSYSTTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYVRQGGY 381
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380 


Chain E from PDB  Type:PROTEIN  Length:381
 aligned with GFO_ZYMMO | Q07982 from UniProtKB/Swiss-Prot  Length:433

    Alignment length:381
                                    62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432 
            GFO_ZYMMO    53 ATLPAGASQVPTTPAGRPMPYAIRPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGALSHGASSYSTTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYVRQGGY 433
               SCOP domains d1ofge1 E:1-160,E:323-381 Glucose-fructose oxidoreductase, N-terminal domain                                                                                    d1ofge2 E:161-322 Glucose-fructose oxidoreductase                                                                                                                 d1ofge1 E:1-160,E:323-381                                   SCOP domains
               CATH domains ---------------------1ofgE01 E:22-160,E:315-345 NAD(P)-binding Rossmann-like Domain                                                                             1ofgE02 E:161-314,E:346-381 Dihydrodipicolinate Reductase; domain 2                                                                                       1ofgE01 E:22-160,E:315-345     1ofgE02 E:161-314,E:346-381          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhh.......................eeeeee...hhhhh.hhhhh.....eeeeeee...hhhhhhhhhhh...hhh......hhhhh......eeee...hhhhhhhhhhhhh...eeee.......hhhhhhhhhhhhhh...eee..hhh..hhhhhhhhhhh......eeeeeeeee.......hhhh....hhhh...hhhh.hhhhhhhhhhhh...eeeeeeeee.....hhh.....eeeeeeee....eeeeeee.....eeeeeeee...eeee..........eeeee..eeeee...........hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhh................ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ofg E   1 ATLPAGASQVPTTPAGRPMPYAIRPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGALSHGASSYSTTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYVRQGGY 381
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380 


Chain F from PDB  Type:PROTEIN  Length:381
 aligned with GFO_ZYMMO | Q07982 from UniProtKB/Swiss-Prot  Length:433

    Alignment length:381
                                    62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432 
            GFO_ZYMMO    53 ATLPAGASQVPTTPAGRPMPYAIRPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGALSHGASSYSTTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYVRQGGY 433
               SCOP domains d1ofgf1 F:1-160,F:323-381 Glucose-fructose oxidoreductase, N-terminal domain                                                                                    d1ofgf2 F:161-322 Glucose-fructose oxidoreductase                                                                                                                 d1ofgf1 F:1-160,F:323-381                                   SCOP domains
               CATH domains ---------------------1ofgF01 F:22-160,F:315-345 NAD(P)-binding Rossmann-like Domain                                                                             1ofgF02 F:161-314,F:346-381 Dihydrodipicolinate Reductase; domain 2                                                                                       1ofgF01 F:22-160,F:315-345     1ofgF02 F:161-314,F:346-381          CATH domains
           Pfam domains (1) -------------------------------GFO_IDH_MocA-1ofgF01 F:32-156                                                                                                -----------GFO_IDH_MocA_C-1ofgF07 F:168-282                                                                                   --------------------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) -------------------------------GFO_IDH_MocA-1ofgF02 F:32-156                                                                                                -----------GFO_IDH_MocA_C-1ofgF08 F:168-282                                                                                   --------------------------------------------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) -------------------------------GFO_IDH_MocA-1ofgF03 F:32-156                                                                                                -----------GFO_IDH_MocA_C-1ofgF09 F:168-282                                                                                   --------------------------------------------------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) -------------------------------GFO_IDH_MocA-1ofgF04 F:32-156                                                                                                -----------GFO_IDH_MocA_C-1ofgF10 F:168-282                                                                                   --------------------------------------------------------------------------------------------------- Pfam domains (4)
           Pfam domains (5) -------------------------------GFO_IDH_MocA-1ofgF05 F:32-156                                                                                                -----------GFO_IDH_MocA_C-1ofgF11 F:168-282                                                                                   --------------------------------------------------------------------------------------------------- Pfam domains (5)
           Pfam domains (6) -------------------------------GFO_IDH_MocA-1ofgF06 F:32-156                                                                                                -----------GFO_IDH_MocA_C-1ofgF12 F:168-282                                                                                   --------------------------------------------------------------------------------------------------- Pfam domains (6)
         Sec.struct. author ....hhhh.......................eeeeee...hhhhh.hhhhh.....eeeeeee...hhhhhhhhhhh...hhh......hhhhh......eeee...hhhhhhhhhhhhh...eeee.......hhhhhhhhhhhhhh...eee..hhh..hhhhhhhhhhh......eeeeeeeee.......hhhh....hhhh...hhhh.hhhhhhhhhhhh...eeeeeeeee.....hhh.....eeeeeeee....eeeeeee.....eeeeeeee...eeee..........eeeee..eeeee...........hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhh................ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ofg F   1 ATLPAGASQVPTTPAGRPMPYAIRPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGALSHGASSYSTTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYVRQGGY 381
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 12)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 12)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: 2-Layer Sandwich (8480)
(-)
Topology: Dihydrodipicolinate Reductase; domain 2 (182)
(-)
Homologous Superfamily: Dihydrodipicolinate Reductase; domain 2 (178)
(-)
Zymomonas mobilis. Organism_taxid: 542. (1)
1a1ofgA02A:161-314,A:346-381
1b1ofgB02B:161-314,B:346-381
1c1ofgC02C:161-314,C:346-381
1d1ofgD02D:161-314,D:346-381
1e1ofgE02E:161-314,E:346-381
1f1ofgF02F:161-314,F:346-381
(-)
Architecture: 3-Layer(aba) Sandwich (12045)
(-)
Topology: Rossmann fold (7312)
(-)
Homologous Superfamily: NAD(P)-binding Rossmann-like Domain (1244)
(-)
Zymomonas mobilis. Organism_taxid: 542. (3)
2a1ofgA01A:22-160,A:315-345
2b1ofgB01B:22-160,B:315-345
2c1ofgC01C:22-160,C:315-345
2d1ofgD01D:22-160,D:315-345
2e1ofgE01E:22-160,E:315-345
2f1ofgF01F:22-160,F:315-345

(-) Pfam Domains  (2, 12)

Asymmetric Unit
(-)
Clan: NADP_Rossmann (1239)
(-)
Clan: ox_reductase_C (19)

(-) Gene Ontology  (6, 6)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (GFO_ZYMMO | Q07982)
molecular function
    GO:0047061    glucose-fructose oxidoreductase activity    Catalysis of the reaction: D-fructose + D-glucose = D-glucitol + D-glucono-1,5-lactone.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0006061    sorbitol biosynthetic process    The chemical reactions and pathways resulting in the formation of sorbitol (D-glucitol), one of the ten stereoisomeric hexitols. It can be derived from glucose by reduction of the aldehyde group.
cellular component
    GO:0042597    periplasmic space    The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GFO_ZYMMO | Q07982: 1evj 1h6a 1h6b 1h6c 1h6d 1ryd 1rye

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1OFG)