1FQV - JenaLib

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:325
 aligned with SKP2_HUMAN | Q13309 from UniProtKB/Swiss-Prot  Length:424

    Alignment length:325
                                   104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414     
           SKP2_HUMAN    95 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ 419
               SCOP domains d1fqva1 A:107-145 Skp2                 d1fqva2 A:146-431 Cyclin A/CDK2-associated p19, Skp2                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1fqvA00 A:107-431 Ribonuclease Inhibitor                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhh.hhhhhhhhh..hhhhhhhhhhhhhh.eee......hhhhhhhhhh....eee....ee..............eee....eehhhhhhhhhh......eee......hhhhhhhhhh.....eee.......hhhhhhhhhhhh....eee.......hhhhhhhhhhhh.....eee........hhhhhhhhhhhh....eee.......hhhhhhhhh......eee........hhhhhhhhhh....eee.....hhhhhhhhhhhh................................ee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: A:107-143 [INCOMPLETE]-----------------------------------------------Exon 1.5  PDB: A:191-236 UniProt: 179-224     --------------------------------Exon 1.7  PDB: A:269-313 UniProt: 257-301    ----------------------------------------------------Exon 1.12c  PDB: A:366-431 UniProt: 354-424 [INCOMPLETE]           Transcript 1 (1)
           Transcript 1 (2) ------------------------------------Exon 1.4  PDB: A:143-191 UniProt: 131-179        --------------------------------------------Exon 1.6b  PDB: A:236-269         -------------------------------------------Exon 1.8          ----------------------------------------------------------------------------------------------------- Transcript 1 (2)
           Transcript 1 (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: A:330-366             ----------------------------------------------------------------- Transcript 1 (3)
                 1fqv A 107 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ 431
                                   116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426

Chain B from PDB  Type:PROTEIN  Length:137
 aligned with SKP1_HUMAN | P63208 from UniProtKB/Swiss-Prot  Length:163

    Alignment length:159
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151         
           SKP1_HUMAN     2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
               SCOP domains d1fqvb2 B:2-68 Cyclin A/CDK2-associ      ated p45, Skp1                            d1fqvb1 B:85-160 Cyclin A/CDK2-associated p45, Skp1                          SCOP domains
               CATH domains 1fqvB00 B:2-160 Potassium Channel K      v1.1; Chain A                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee....eeeeehhhhh.hhhhhhhhhhh..------..eee...hhhhhhhhhhhhhhh...----------------.hhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhh.......hhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------L-------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 2 (1) Exon 2.5b  PDB: B:2-33          ------------------------Exon 2.8d  PDB: B:58-105 (gaps) UniProt: 58-105 Exon 2.9d  PDB: B:106-152 UniProt: 106-152     2.9l     Transcript 2 (1)
           Transcript 2 (2) -------------------------------Exon 2.7 UniProt: 33-57  ------------------------------------------------------------------------------------------------------- Transcript 2 (2)
                 1fqv B   2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGM------DPVPLPNVNAAILKKVIQWCTHHKDD----------------IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
                                    11        21        31    |    - |      51        61      |  -         -   |    91       101       111       121       131       141       151         
                                                             36     43                       68               85

Chain C from PDB  Type:PROTEIN  Length:325
 aligned with SKP2_HUMAN | Q13309 from UniProtKB/Swiss-Prot  Length:424

    Alignment length:325
                                   104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414     
           SKP2_HUMAN    95 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ 419
               SCOP domains d1fqvc1 C:107-145 Skp2                 d1fqvc2 C:146-431 Cyclin A/CDK2-associated p19, Skp2                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1fqvC00 C:107-431 Ribonuclease Inhibitor                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhh.hhhhhhhhh..hhhhhhhhhhhhhh.eee......hhhhhhhhhh....eee....ee..............eee....eehhhhhhhhhh......eee......hhhhhhhhh......eee.......hhhhhhhhhhhh....eee.......hhhhhhhhhhhh.....eee........hhhhhhhhhhhh....eee.......hhhhhhhhh......eee.......hhhhhhhhhhh....eee.....hhhhhhhhhhhh...ee...................hhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: C:107-143 [INCOMPLETE]-----------------------------------------------Exon 1.5  PDB: C:191-236 UniProt: 179-224     --------------------------------Exon 1.7  PDB: C:269-313 UniProt: 257-301    ----------------------------------------------------Exon 1.12c  PDB: C:366-431 UniProt: 354-424 [INCOMPLETE]           Transcript 1 (1)
           Transcript 1 (2) ------------------------------------Exon 1.4  PDB: C:143-191 UniProt: 131-179        --------------------------------------------Exon 1.6b  PDB: C:236-269         -------------------------------------------Exon 1.8          ----------------------------------------------------------------------------------------------------- Transcript 1 (2)
           Transcript 1 (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: C:330-366             ----------------------------------------------------------------- Transcript 1 (3)
                 1fqv C 107 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ 431
                                   116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426

Chain D from PDB  Type:PROTEIN  Length:137
 aligned with SKP1_HUMAN | P63208 from UniProtKB/Swiss-Prot  Length:163

    Alignment length:159
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151         
           SKP1_HUMAN     2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
               SCOP domains d1fqvd2 D:2-68 Cyclin A/CDK2-associ      ated p45, Skp1                            d1fqvd1 D:85-160 Cyclin A/CDK2-associated p45, Skp1                          SCOP domains
               CATH domains 1fqvD00 D:2-160 Potassium Channel K      v1.1; Chain A                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....eeeeehhhhh.hhhhhhhhhhh..------.eee....hhhhhhhhhhhhhhh...----------------.hhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhh.......hhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------L-------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 2 (1) Exon 2.5b  PDB: D:2-33          ------------------------Exon 2.8d  PDB: D:58-105 (gaps) UniProt: 58-105 Exon 2.9d  PDB: D:106-152 UniProt: 106-152     2.9l     Transcript 2 (1)
           Transcript 2 (2) -------------------------------Exon 2.7 UniProt: 33-57  ------------------------------------------------------------------------------------------------------- Transcript 2 (2)
                 1fqv D   2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGM------DPVPLPNVNAAILKKVIQWCTHHKDD----------------IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
                                    11        21        31    |    - |      51        61      |  -         -   |    91       101       111       121       131       141       151         
                                                             36     43                       68               85

Chain E from PDB  Type:PROTEIN  Length:325
 aligned with SKP2_HUMAN | Q13309 from UniProtKB/Swiss-Prot  Length:424

    Alignment length:325
                                   104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414     
           SKP2_HUMAN    95 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ 419
               SCOP domains d1fqve1 E:107-145 Skp2                 d1fqve2 E:146-431 Cyclin A/CDK2-associated p19, Skp2                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1fqvE00 E:107-431 Ribonuclease Inhibitor                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhh.hhhhhhhhh..hhhhhhhhhhhhhh.eee......hhhhhhhhhh....eee....ee..............eee....eehhhhhhhhhh......eee......hhhhhhhhh......eee.......hhhhhhhhhhhh....eee.......hhhhhhhhhhhh.....eee........hhhhhhhhhhhh....eee.......hhhhhhhhh......eee.......hhhhhhhhhh.....eee.....hhhhhhhhhhhh................................ee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: E:107-143 [INCOMPLETE]-----------------------------------------------Exon 1.5  PDB: E:191-236 UniProt: 179-224     --------------------------------Exon 1.7  PDB: E:269-313 UniProt: 257-301    ----------------------------------------------------Exon 1.12c  PDB: E:366-431 UniProt: 354-424 [INCOMPLETE]           Transcript 1 (1)
           Transcript 1 (2) ------------------------------------Exon 1.4  PDB: E:143-191 UniProt: 131-179        --------------------------------------------Exon 1.6b  PDB: E:236-269         -------------------------------------------Exon 1.8          ----------------------------------------------------------------------------------------------------- Transcript 1 (2)
           Transcript 1 (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: E:330-366             ----------------------------------------------------------------- Transcript 1 (3)
                 1fqv E 107 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ 431
                                   116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426

Chain F from PDB  Type:PROTEIN  Length:137
 aligned with SKP1_HUMAN | P63208 from UniProtKB/Swiss-Prot  Length:163

    Alignment length:159
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151         
           SKP1_HUMAN     2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
               SCOP domains d1fqvf2 F:2-68 Cyclin A/CDK2-associ      ated p45, Skp1                            d1fqvf1 F:85-160 Cyclin A/CDK2-associated p45, Skp1                          SCOP domains
               CATH domains 1fqvF00 F:2-160 Potassium Channel K      v1.1; Chain A                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee....eeeeehhhhh.hhhhhhhhhhh..------..eee...hhhhhhhhhhhhhhh...----------------.hhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhh........hhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------L-------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 2 (1) Exon 2.5b  PDB: F:2-33          ------------------------Exon 2.8d  PDB: F:58-105 (gaps) UniProt: 58-105 Exon 2.9d  PDB: F:106-152 UniProt: 106-152     2.9l     Transcript 2 (1)
           Transcript 2 (2) -------------------------------Exon 2.7 UniProt: 33-57  ------------------------------------------------------------------------------------------------------- Transcript 2 (2)
                 1fqv F   2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGM------DPVPLPNVNAAILKKVIQWCTHHKDD----------------IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
                                    11        21        31    |    - |      51        61      |  -         -   |    91       101       111       121       131       141       151         
                                                             36     43                       68               85

Chain G from PDB  Type:PROTEIN  Length:325
 aligned with SKP2_HUMAN | Q13309 from UniProtKB/Swiss-Prot  Length:424

    Alignment length:325
                                   104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414     
           SKP2_HUMAN    95 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ 419
               SCOP domains d1fqvg1 G:107-145 Skp2                 d1fqvg2 G:146-431 Cyclin A/CDK2-associated p19, Skp2                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1fqvG00 G:107-431 Ribonuclease Inhibitor                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhh.hhhhhhhhh..hhhhhhhhhhhhhh.eee......hhhhhhhhhh....eee....ee..............eee....eehhhhhhhhhh......eee......hhhhhhhhh......eee.......hhhhhhhhhhhh....eee.......hhhhhhhhhhhh.....eee........hhhhhhhhhhhh....eee.......hhhhhhhhh......eee.......hhhhhhhhhhh....eee.....hhhhhhhhhhhh................................ee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: G:107-143 [INCOMPLETE]-----------------------------------------------Exon 1.5  PDB: G:191-236 UniProt: 179-224     --------------------------------Exon 1.7  PDB: G:269-313 UniProt: 257-301    ----------------------------------------------------Exon 1.12c  PDB: G:366-431 UniProt: 354-424 [INCOMPLETE]           Transcript 1 (1)
           Transcript 1 (2) ------------------------------------Exon 1.4  PDB: G:143-191 UniProt: 131-179        --------------------------------------------Exon 1.6b  PDB: G:236-269         -------------------------------------------Exon 1.8          ----------------------------------------------------------------------------------------------------- Transcript 1 (2)
           Transcript 1 (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: G:330-366             ----------------------------------------------------------------- Transcript 1 (3)
                 1fqv G 107 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ 431
                                   116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426

Chain H from PDB  Type:PROTEIN  Length:137
 aligned with SKP1_HUMAN | P63208 from UniProtKB/Swiss-Prot  Length:163

    Alignment length:159
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151         
           SKP1_HUMAN     2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
               SCOP domains d1fqvh2 H:2-68 Cyclin A/CDK2-associ      ated p45, Skp1                            d1fqvh1 H:85-160 Cyclin A/CDK2-associated p45, Skp1                          SCOP domains
               CATH domains 1fqvH00 H:2-160 Potassium Channel K      v1.1; Chain A                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee....eeeeehhhhh.hhhhhhhhhhh..------..eee...hhhhhhhhhhhhhhh...----------------.hhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhh.......hhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------L-------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 2 (1) Exon 2.5b  PDB: H:2-33          ------------------------Exon 2.8d  PDB: H:58-105 (gaps) UniProt: 58-105 Exon 2.9d  PDB: H:106-152 UniProt: 106-152     2.9l     Transcript 2 (1)
           Transcript 2 (2) -------------------------------Exon 2.7 UniProt: 33-57  ------------------------------------------------------------------------------------------------------- Transcript 2 (2)
                 1fqv H   2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGM------DPVPLPNVNAAILKKVIQWCTHHKDD----------------IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
                                    11        21        31    |    - |      51        61      |  -         -   |    91       101       111       121       131       141       151         
                                                             36     43                       68               85

Chain I from PDB  Type:PROTEIN  Length:325
 aligned with SKP2_HUMAN | Q13309 from UniProtKB/Swiss-Prot  Length:424

    Alignment length:325
                                   104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414     
           SKP2_HUMAN    95 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ 419
               SCOP domains d1fqvi1 I:107-145 Skp2                 d1fqvi2 I:146-431 Cyclin A/CDK2-associated p19, Skp2                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1fqvI00 I:107-431 Ribonuclease Inhibitor                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhh.hhhhhhhhh..hhhhhhhhhhhhhh.eee......hhhhhhhhhh....eee....ee..............eee....eehhhhhhhhhh......eee......hhhhhhhhh......eee.......hhhhhhhhhhhh....eee.......hhhhhhhhhhhh.....eee........hhhhhhhhhhhh....eee.......hhhhhhhhh......eee.......hhhhhhhhhh.....eee.....hhhhhhhhhhhh................................ee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: I:107-143 [INCOMPLETE]-----------------------------------------------Exon 1.5  PDB: I:191-236 UniProt: 179-224     --------------------------------Exon 1.7  PDB: I:269-313 UniProt: 257-301    ----------------------------------------------------Exon 1.12c  PDB: I:366-431 UniProt: 354-424 [INCOMPLETE]           Transcript 1 (1)
           Transcript 1 (2) ------------------------------------Exon 1.4  PDB: I:143-191 UniProt: 131-179        --------------------------------------------Exon 1.6b  PDB: I:236-269         -------------------------------------------Exon 1.8          ----------------------------------------------------------------------------------------------------- Transcript 1 (2)
           Transcript 1 (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: I:330-366             ----------------------------------------------------------------- Transcript 1 (3)
                 1fqv I 107 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ 431
                                   116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426

Chain J from PDB  Type:PROTEIN  Length:137
 aligned with SKP1_HUMAN | P63208 from UniProtKB/Swiss-Prot  Length:163

    Alignment length:159
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151         
           SKP1_HUMAN     2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
               SCOP domains d1fqvj2 J:2-68 Cyclin A/CDK2-associ      ated p45, Skp1                            d1fqvj1 J:85-160 Cyclin A/CDK2-associated p45, Skp1                          SCOP domains
               CATH domains 1fqvJ00 J:2-160 Potassium Channel K      v1.1; Chain A                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee....eeeeehhhhh.hhhhhhhhhhh..------.eeee...hhhhhhhhhhhhhhh...----------------.hhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhh.......hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------L-------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 2 (1) Exon 2.5b  PDB: J:2-33          ------------------------Exon 2.8d  PDB: J:58-105 (gaps) UniProt: 58-105 Exon 2.9d  PDB: J:106-152 UniProt: 106-152     2.9l     Transcript 2 (1)
           Transcript 2 (2) -------------------------------Exon 2.7 UniProt: 33-57  ------------------------------------------------------------------------------------------------------- Transcript 2 (2)
                 1fqv J   2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGM------DPVPLPNVNAAILKKVIQWCTHHKDD----------------IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
                                    11        21        31    |    - |      51        61      |  -         -   |    91       101       111       121       131       141       151         
                                                             36     43                       68               85

Chain K from PDB  Type:PROTEIN  Length:325
 aligned with SKP2_HUMAN | Q13309 from UniProtKB/Swiss-Prot  Length:424

    Alignment length:325
                                   104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414     
           SKP2_HUMAN    95 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ 419
               SCOP domains d1fqvk1 K:107-145 Skp2                 d1fqvk2 K:146-431 Cyclin A/CDK2-associated p19, Skp2                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1fqvK00 K:107-431 Ribonuclease Inhibitor                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhh.hhhhhhhhh..hhhhhhhhhhhhhh.eee......hhhhhhhhhh....eee....ee..............eee....eehhhhhhhhhh......eee......hhhhhhhhh......eee.......hhhhhhhhhhhh....eee.......hhhhhhhhhhhh.....eee........hhhhhhhhhhhh....eee.......hhhhhhhhh......eee.......hhhhhhhhhh.....eee.....hhhhhhhhhhhh.................................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: K:107-143 [INCOMPLETE]-----------------------------------------------Exon 1.5  PDB: K:191-236 UniProt: 179-224     --------------------------------Exon 1.7  PDB: K:269-313 UniProt: 257-301    ----------------------------------------------------Exon 1.12c  PDB: K:366-431 UniProt: 354-424 [INCOMPLETE]           Transcript 1 (1)
           Transcript 1 (2) ------------------------------------Exon 1.4  PDB: K:143-191 UniProt: 131-179        --------------------------------------------Exon 1.6b  PDB: K:236-269         -------------------------------------------Exon 1.8          ----------------------------------------------------------------------------------------------------- Transcript 1 (2)
           Transcript 1 (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: K:330-366             ----------------------------------------------------------------- Transcript 1 (3)
                 1fqv K 107 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ 431
                                   116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426

Chain L from PDB  Type:PROTEIN  Length:137
 aligned with SKP1_HUMAN | P63208 from UniProtKB/Swiss-Prot  Length:163

    Alignment length:159
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151         
           SKP1_HUMAN     2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
               SCOP domains d1fqvl2 L:2-68 Cyclin A/CDK2-associ      ated p45, Skp1                            d1fqvl1 L:85-160 Cyclin A/CDK2-associated p45, Skp1                          SCOP domains
               CATH domains 1fqvL00 L:2-160 Potassium Channel K      v1.1; Chain A                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee....eeeeehhhhh.hhhhhhhhhhh..------..eee...hhhhhhhhhhhhhhh...----------------.hhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhh.......hhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------L-------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 2 (1) Exon 2.5b  PDB: L:2-33          ------------------------Exon 2.8d  PDB: L:58-105 (gaps) UniProt: 58-105 Exon 2.9d  PDB: L:106-152 UniProt: 106-152     2.9l     Transcript 2 (1)
           Transcript 2 (2) -------------------------------Exon 2.7 UniProt: 33-57  ------------------------------------------------------------------------------------------------------- Transcript 2 (2)
                 1fqv L   2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGM------DPVPLPNVNAAILKKVIQWCTHHKDD----------------IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
                                    11        21        31    |    - |      51        61      |  -         -   |    91       101       111       121       131       141       151         
                                                             36     43                       68               85

Chain M from PDB  Type:PROTEIN  Length:325
 aligned with SKP2_HUMAN | Q13309 from UniProtKB/Swiss-Prot  Length:424

    Alignment length:325
                                   104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414     
           SKP2_HUMAN    95 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ 419
               SCOP domains d1fqvm1 M:107-145 Skp2                 d1fqvm2 M:146-431 Cyclin A/CDK2-associated p19, Skp2                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1fqvM00 M:107-431 Ribonuclease Inhibitor                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhh.hhhhhhhhh..hhhhhhhhhhhhhh.eee......hhhhhhhhhh....eee....ee..............eee....eehhhhhhhhhh......eee......hhhhhhhhh......eee.......hhhhhhhhhhhh....eee.......hhhhhhhhhhhh.....eee........hhhhhhhhhhhh....eee.......hhhhhhhhh......eee.........hhhhhhhhh....eee.....hhhhhhhhhhhh................................ee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: M:107-143 [INCOMPLETE]-----------------------------------------------Exon 1.5  PDB: M:191-236 UniProt: 179-224     --------------------------------Exon 1.7  PDB: M:269-313 UniProt: 257-301    ----------------------------------------------------Exon 1.12c  PDB: M:366-431 UniProt: 354-424 [INCOMPLETE]           Transcript 1 (1)
           Transcript 1 (2) ------------------------------------Exon 1.4  PDB: M:143-191 UniProt: 131-179        --------------------------------------------Exon 1.6b  PDB: M:236-269         -------------------------------------------Exon 1.8          ----------------------------------------------------------------------------------------------------- Transcript 1 (2)
           Transcript 1 (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: M:330-366             ----------------------------------------------------------------- Transcript 1 (3)
                 1fqv M 107 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ 431
                                   116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426

Chain N from PDB  Type:PROTEIN  Length:137
 aligned with SKP1_HUMAN | P63208 from UniProtKB/Swiss-Prot  Length:163

    Alignment length:159
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151         
           SKP1_HUMAN     2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
               SCOP domains d1fqvn2 N:2-68 Cyclin A/CDK2-associ      ated p45, Skp1                            d1fqvn1 N:85-160 Cyclin A/CDK2-associated p45, Skp1                          SCOP domains
               CATH domains 1fqvN00 N:2-160 Potassium Channel K      v1.1; Chain A                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee....eeeeehhhhh.hhhhhhhhhhh..------..eee...hhhhhhhhhhhhhhh...----------------.hhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhh.......hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------L-------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 2 (1) Exon 2.5b  PDB: N:2-33          ------------------------Exon 2.8d  PDB: N:58-105 (gaps) UniProt: 58-105 Exon 2.9d  PDB: N:106-152 UniProt: 106-152     2.9l     Transcript 2 (1)
           Transcript 2 (2) -------------------------------Exon 2.7 UniProt: 33-57  ------------------------------------------------------------------------------------------------------- Transcript 2 (2)
                 1fqv N   2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGM------DPVPLPNVNAAILKKVIQWCTHHKDD----------------IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
                                    11        21        31    |    - |      51        61      |  -         -   |    91       101       111       121       131       141       151         
                                                             36     43                       68               85

Chain O from PDB  Type:PROTEIN  Length:325
 aligned with SKP2_HUMAN | Q13309 from UniProtKB/Swiss-Prot  Length:424

    Alignment length:325
                                   104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414     
           SKP2_HUMAN    95 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ 419
               SCOP domains d1fqvo1 O:107-145 Skp2                 d1fqvo2 O:146-431 Cyclin A/CDK2-associated p19, Skp2                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1fqvO00 O:107-431 Ribonuclease Inhibitor                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhh..hhhhhhhhh..hhhhhhhhhhhhhh.eee......hhhhhhhhhh....eee....ee..............eee....eehhhhhhhhhh......eee......hhhhhhhhh......eee.......hhhhhhhhhhhh....eee.......hhhhhhhhhhhh.....eee........hhhhhhhhhhhh....eee.......hhhhhhhhh......eee.........hhhhhhhhh....eee.....hhhhhhhhhhhh................................ee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: O:107-143 [INCOMPLETE]-----------------------------------------------Exon 1.5  PDB: O:191-236 UniProt: 179-224     --------------------------------Exon 1.7  PDB: O:269-313 UniProt: 257-301    ----------------------------------------------------Exon 1.12c  PDB: O:366-431 UniProt: 354-424 [INCOMPLETE]           Transcript 1 (1)
           Transcript 1 (2) ------------------------------------Exon 1.4  PDB: O:143-191 UniProt: 131-179        --------------------------------------------Exon 1.6b  PDB: O:236-269         -------------------------------------------Exon 1.8          ----------------------------------------------------------------------------------------------------- Transcript 1 (2)
           Transcript 1 (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: O:330-366             ----------------------------------------------------------------- Transcript 1 (3)
                 1fqv O 107 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQ 431
                                   116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426

Chain P from PDB  Type:PROTEIN  Length:137
 aligned with SKP1_HUMAN | P63208 from UniProtKB/Swiss-Prot  Length:163

    Alignment length:159
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151         
           SKP1_HUMAN     2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
               SCOP domains d1fqvp2 P:2-68 Cyclin A/CDK2-associ      ated p45, Skp1                            d1fqvp1 P:85-160 Cyclin A/CDK2-associated p45, Skp1                          SCOP domains
               CATH domains 1fqvP00 P:2-160 Potassium Channel K      v1.1; Chain A                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee....eeeeehhhhh.hhhhhhhhhhh..------..eee...hhhhhhhhhhhhhhh...----------------.hhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.......hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------L-------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 2 (1) Exon 2.5b  PDB: P:2-33          ------------------------Exon 2.8d  PDB: P:58-105 (gaps) UniProt: 58-105 Exon 2.9d  PDB: P:106-152 UniProt: 106-152     2.9l     Transcript 2 (1)
           Transcript 2 (2) -------------------------------Exon 2.7 UniProt: 33-57  ------------------------------------------------------------------------------------------------------- Transcript 2 (2)
                 1fqv P   2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGM------DPVPLPNVNAAILKKVIQWCTHHKDD----------------IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
                                    11        21        31    |    - |      51        61      |  -         -   |    91       101       111       121       131       141       151         
                                                             36     43                       68               85

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit(hide GO term definitions)

Chain A,C,E,G,I,K,M,O (SKP2_HUMAN | Q13309)

molecular function
	GO:0042802	identical protein binding	Interacting selectively and non-covalently with an identical protein or proteins.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0061630	ubiquitin protein ligase activity	Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.
	GO:0004842	ubiquitin-protein transferase activity	Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
biological process
	GO:0000082	G1/S transition of mitotic cell cycle	The mitotic cell cycle transition by which a cell in G1 commits to S phase. The process begins with the build up of G1 cyclin-dependent kinase (G1 CDK), resulting in the activation of transcription of G1 cyclins. The process ends with the positive feedback of the G1 cyclins on the G1 CDK which commits the cell to S phase, in which DNA replication is initiated.
	GO:0000086	G2/M transition of mitotic cell cycle	The mitotic cell cycle transition by which a cell in G2 commits to M phase. The process begins when the kinase activity of M cyclin/CDK complex reaches a threshold high enough for the cell cycle to proceed. This is accomplished by activating a positive feedback loop that results in the accumulation of unphosphorylated and active M cyclin/CDK complex.
	GO:0031145	anaphase-promoting complex-dependent catabolic process	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome.
	GO:0008283	cell proliferation	The multiplication or reproduction of cells, resulting in the expansion of a cell population.
	GO:0071460	cellular response to cell-matrix adhesion	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of cell-matrix adhesion.
	GO:0033148	positive regulation of intracellular estrogen receptor signaling pathway	Any process that activates or increases the frequency, rate or extent of the activity of an intracellular estrogen receptor signaling pathway.
	GO:1902916	positive regulation of protein polyubiquitination	Any process that activates or increases the frequency, rate or extent of protein polyubiquitination.
	GO:0048661	positive regulation of smooth muscle cell proliferation	Any process that activates or increases the rate or extent of smooth muscle cell proliferation.
	GO:0000209	protein polyubiquitination	Addition of multiple ubiquitin groups to a protein, forming a ubiquitin chain.
	GO:0016567	protein ubiquitination	The process in which one or more ubiquitin groups are added to a protein.
	GO:0042981	regulation of apoptotic process	Any process that modulates the occurrence or rate of cell death by apoptotic process.
	GO:0051726	regulation of cell cycle	Any process that modulates the rate or extent of progression through the cell cycle.
	GO:0006511	ubiquitin-dependent protein catabolic process	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
cellular component
	GO:0019005	SCF ubiquitin ligase complex	A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0005730	nucleolus	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
	GO:0005654	nucleoplasm	That part of the nuclear content other than the chromosomes or the nucleolus.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Chain B,D,F,H,J,L,N,P (SKP1_HUMAN | P63208)

molecular function
	GO:0008013	beta-catenin binding	Interacting selectively and non-covalently with the beta subunit of the catenin complex.
	GO:0097602	cullin family protein binding	Interacting selectively and non-covalently with any member of the cullin family, hydrophobic proteins that act as scaffolds for ubiquitin ligases (E3).
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0061630	ubiquitin protein ligase activity	Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.
	GO:0004842	ubiquitin-protein transferase activity	Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
biological process
	GO:0038095	Fc-epsilon receptor signaling pathway	A series of molecular signals initiated by the binding of the Fc portion of immunoglobulin E (IgE) to an Fc-epsilon receptor on the surface of a signal-receiving cell, and ending with regulation of a downstream cellular process, e.g. transcription. The Fc portion of an immunoglobulin is its C-terminal constant region.
	GO:0000086	G2/M transition of mitotic cell cycle	The mitotic cell cycle transition by which a cell in G2 commits to M phase. The process begins when the kinase activity of M cyclin/CDK complex reaches a threshold high enough for the cell cycle to proceed. This is accomplished by activating a positive feedback loop that results in the accumulation of unphosphorylated and active M cyclin/CDK complex.
	GO:0038061	NIK/NF-kappaB signaling	The process in which a signal is passed on to downstream components within the cell through the NIK-dependent processing and activation of NF-KappaB. Begins with activation of the NF-KappaB-inducing kinase (NIK), which in turn phosphorylates and activates IkappaB kinase alpha (IKKalpha). IKKalpha phosphorylates the NF-Kappa B2 protein (p100) leading to p100 processing and release of an active NF-KappaB (p52).
	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by an SCF (Skp1/Cul1/F-box protein) complex, and mediated by the proteasome.
	GO:0050852	T cell receptor signaling pathway	A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell.
	GO:0016055	Wnt signaling pathway	The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state.
	GO:0035518	histone H2A monoubiquitination	The modification of histone H2A by addition of a single ubiquitin group.
	GO:0051437	positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition	Any process that activates, maintains or increases the rate of ubiquitin ligase activity that contributes to the regulation of the mitotic cell cycle phase transition.
	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
	GO:0000209	protein polyubiquitination	Addition of multiple ubiquitin groups to a protein, forming a ubiquitin chain.
	GO:0016567	protein ubiquitination	The process in which one or more ubiquitin groups are added to a protein.
	GO:0002223	stimulatory C-type lectin receptor signaling pathway	Any series of molecular signals generated as a consequence of binding to a C-type lectin receptor capable of cellular activation.
	GO:0051403	stress-activated MAPK cascade	A series of molecular signals in which a stress-activated MAP kinase cascade relays one or more of the signals; MAP kinase cascades involve at least three protein kinase activities and culminate in the phosphorylation and activation of a MAP kinase.
	GO:0006511	ubiquitin-dependent protein catabolic process	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
cellular component
	GO:0031467	Cul7-RING ubiquitin ligase complex	A ubiquitin ligase complex in which a cullin from the Cul7 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 linker and an F-box protein.
	GO:0031519	PcG protein complex	A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure.
	GO:0019005	SCF ubiquitin ligase complex	A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0005654	nucleoplasm	That part of the nuclear content other than the chromosomes or the nucleolus.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (1, 8)

PROSITE Motifs (0, 0)

Exons (13, 104)

Sequences/Alignments

Classification and Annotation

SCOP Domains (4, 32)

CATH Domains (2, 16)

Pfam Domains (0, 0)

Gene Ontology (38, 50)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File