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(-) Description

Title :  CALCIUM-FREE CALMODULIN
 
Authors :  H. Kuboniwa, N. Tjandra, S. Grzesiek, H. Ren, C. B. Klee, A. Bax
Date :  02 Aug 95  (Deposition) - 07 Dec 95  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (25x)
Keywords :  Calcium-Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  H. Kuboniwa, N. Tjandra, S. Grzesiek, H. Ren, C. B. Klee, A. Bax
Solution Structure Of Calcium-Free Calmodulin.
Nat. Struct. Biol. V. 2 768 1995
PubMed-ID: 7552748  |  Reference-DOI: 10.1038/NSB0995-768
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CALMODULIN
    ChainsA
    Organism CommonAFRICAN CLAWED FROG
    Organism ScientificXENOPUS LAEVIS
    Organism Taxid8355

 Structural Features

(-) Chains, Units

  
NMR Structure (25x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1CFC)

(-) Sites  (0, 0)

(no "Site" information available for 1CFC)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1CFC)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1CFC)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1CFC)

(-) PROSITE Motifs  (2, 8)

NMR Structure (2, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EF_HAND_2PS50222 EF-hand calcium-binding domain profile.CAM2B_XENLA8-43
44-79
81-116
117-149
  4A:7-42
A:43-78
A:80-115
A:116-148
CAM2A_XENLA8-43
44-79
81-116
117-149
  4A:7-42
A:43-78
A:80-115
A:116-148
CALM1_XENLA8-43
44-79
81-116
117-149
  4A:7-42
A:43-78
A:80-115
A:116-148
2EF_HAND_1PS00018 EF-hand calcium-binding domain.CAM2B_XENLA21-33
57-69
94-106
130-142
  4A:20-32
A:56-68
A:93-105
A:129-141
CAM2A_XENLA21-33
57-69
94-106
130-142
  4A:20-32
A:56-68
A:93-105
A:129-141
CALM1_XENLA21-33
57-69
94-106
130-142
  4A:20-32
A:56-68
A:93-105
A:129-141

(-) Exons   (0, 0)

(no "Exon" information available for 1CFC)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:148
 aligned with CALM1_XENLA | P0DP33 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:148
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141        
          CALM1_XENLA     2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
               SCOP domains d1cfca_ A: Calmodulin                                                                                                                                SCOP domains
               CATH domains 1cfcA00 A:1-148 EF-hand                                                                                                                              CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhh......eeehhhhhhhhhh......hhhhhhhhhhh......eeehhhhhhhhhhh......hhhhhhhhhh..........hhhhhhhhhh......hhhhhhhhhh...........hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------EF_HAND_2  PDB: A:7-42 UniProt: 8-43EF_HAND_2  PDB: A:43-78             -EF_HAND_2  PDB: A:80-115            EF_HAND_2  PDB: A:116-148         PROSITE (3)
                PROSITE (4) ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) -------------------EF_HAND_1    -----------------------EF_HAND_1    ------------------------EF_HAND_1    -----------------------EF_HAND_1    ------- PROSITE (6)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1cfc A   1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 148
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140        

Chain A from PDB  Type:PROTEIN  Length:148
 aligned with CAM2A_XENLA | P0DP34 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:148
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141        
          CAM2A_XENLA     2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
               SCOP domains d1cfca_ A: Calmodulin                                                                                                                                SCOP domains
               CATH domains 1cfcA00 A:1-148 EF-hand                                                                                                                              CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhh......eeehhhhhhhhhh......hhhhhhhhhhh......eeehhhhhhhhhhh......hhhhhhhhhh..........hhhhhhhhhh......hhhhhhhhhh...........hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------EF_HAND_2  PDB: A:7-42 UniProt: 8-43EF_HAND_2  PDB: A:43-78             -EF_HAND_2  PDB: A:80-115            EF_HAND_2  PDB: A:116-148         PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------EF_HAND_1    -----------------------EF_HAND_1    ------------------------EF_HAND_1    -----------------------EF_HAND_1    ------- PROSITE (4)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1cfc A   1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 148
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140        

Chain A from PDB  Type:PROTEIN  Length:148
 aligned with CAM2B_XENLA | P0DP35 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:148
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141        
          CAM2B_XENLA     2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
               SCOP domains d1cfca_ A: Calmodulin                                                                                                                                SCOP domains
               CATH domains 1cfcA00 A:1-148 EF-hand                                                                                                                              CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhh......eeehhhhhhhhhh......hhhhhhhhhhh......eeehhhhhhhhhhh......hhhhhhhhhh..........hhhhhhhhhh......hhhhhhhhhh...........hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ------EF_HAND_2  PDB: A:7-42 UniProt: 8-43EF_HAND_2  PDB: A:43-78             -EF_HAND_2  PDB: A:80-115            EF_HAND_2  PDB: A:116-148         PROSITE (1)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) -------------------EF_HAND_1    -----------------------EF_HAND_1    ------------------------EF_HAND_1    -----------------------EF_HAND_1    ------- PROSITE (5)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1cfc A   1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 148
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140        

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure

(-) CATH Domains  (1, 1)

NMR Structure

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1CFC)

(-) Gene Ontology  (4, 4)

NMR Structure(hide GO term definitions)
Chain A   (CALM1_XENLA | P0DP33)

Chain A   (CAM2B_XENLA | P0DP35)

Chain A   (CAM2A_XENLA | P0DP34)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CALM1_XENLA | P0DP331aji 1cfd 1cff 1ckk 1cm1 1cm4 1deg 1dmo 1f70 1f71 1iq5 1k90 1k93 1lvc 1mux 1nkf 1nwd 1qiv 1qiw 1sk6 1sy9 1up5 1x02 1y0v 2col 2i08 2k3s 2kdu 2llo 2llq 2mes 2rrt 3cln 4r8g 5t0x
        CAM2A_XENLA | P0DP341aji 1cfd 1cff 1ckk 1cm1 1cm4 1deg 1dmo 1f70 1f71 1iq5 1k90 1k93 1lvc 1mux 1nkf 1nwd 1qiv 1qiw 1sk6 1sy9 1up5 1x02 1y0v 2col 2i08 2k3s 2kdu 2llo 2llq 2mes 2rrt 3cln 4r8g 5t0x
        CAM2B_XENLA | P0DP351aji 1cfd 1cff 1ckk 1cm1 1cm4 1deg 1dmo 1f70 1f71 1iq5 1k90 1k93 1lvc 1mux 1nkf 1nwd 1qiv 1qiw 1sk6 1sy9 1up5 1x02 1y0v 2col 2i08 2k3s 2kdu 2llo 2llq 2mes 2rrt 3cln 4r8g 5t0x

(-) Related Entries Specified in the PDB File

1cfd